RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 IQGAP2Q13576 1575 aa17.62■□□□□ 0.41
PKP4-215ENST00000494945 EFCAB5A4FU69 1503 aa17.6■□□□□ 0.41
PKP4-215ENST00000494945 CEP170Q5SW79 1584 aa17.6■□□□□ 0.41
PKP4-215ENST00000494945 CHMP7Q8WUX9 453 aaPredicted RBP17.57■□□□□ 0.4
PKP4-215ENST00000494945 SAMD9Q5K651 1589 aa17.57■□□□□ 0.4
PKP4-215ENST00000494945 NUP160Q12769 1436 aa17.55■□□□□ 0.4
PKP4-215ENST00000494945 KIAA0586Q9BVV6 1533 aa17.55■□□□□ 0.4
PKP4-215ENST00000494945 ARHGAP35Q9NRY4 1499 aa17.54■□□□□ 0.4
PKP4-215ENST00000494945 UGGT2Q9NYU1 1516 aa17.52■□□□□ 0.39
PKP4-215ENST00000494945 ARAP1Q96P48 1450 aa17.51■□□□□ 0.39
PKP4-215ENST00000494945 FBLN2P98095 1184 aa17.5■□□□□ 0.39
PKP4-215ENST00000494945 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
PKP4-215ENST00000494945 RANGAP1P46060 587 aaPredicted RBP17.47■□□□□ 0.39
PKP4-215ENST00000494945 SHROOM2Q13796 1616 aa17.45■□□□□ 0.38
PKP4-215ENST00000494945 KIAA0556O60303 1618 aa17.44■□□□□ 0.38
PKP4-215ENST00000494945 CLASP1Q7Z460 1538 aa17.42■□□□□ 0.38
PKP4-215ENST00000494945 DISP1Q96F81 1524 aa17.39■□□□□ 0.37
PKP4-215ENST00000494945 FHOD3Q2V2M9 1422 aa17.38■□□□□ 0.37
PKP4-215ENST00000494945 PCF11O94913 1555 aaKnown RBP17.36■□□□□ 0.37
PKP4-215ENST00000494945 FMN1Q68DA7 1419 aa17.36■□□□□ 0.37
PKP4-215ENST00000494945 CARMIL2Q6F5E8 1435 aa17.34■□□□□ 0.37
PKP4-215ENST00000494945 CFAP43Q8NDM7 1665 aa17.34■□□□□ 0.37
PKP4-215ENST00000494945 LRRIQ1Q96JM4 1722 aa17.34■□□□□ 0.37
PKP4-215ENST00000494945 FYCO1Q9BQS8 1478 aa17.32■□□□□ 0.36
PKP4-215ENST00000494945 JPH4Q96JJ6 628 aa17.32■□□□□ 0.36
PKP4-215ENST00000494945 P3H3Q8IVL6 736 aa17.31■□□□□ 0.36
PKP4-215ENST00000494945 CASKIN1Q8WXD9 1431 aa17.3■□□□□ 0.36
PKP4-215ENST00000494945 HECW1Q76N89 1606 aa17.29■□□□□ 0.36
PKP4-215ENST00000494945 MAP3K1Q13233 1512 aa17.28■□□□□ 0.36
PKP4-215ENST00000494945 RAPGEF6Q8TEU7 1601 aa17.27■□□□□ 0.36
PKP4-215ENST00000494945 PRG4Q92954 1404 aaPredicted RBP17.27■□□□□ 0.35
PKP4-215ENST00000494945 TIAM1Q13009 1591 aa17.27■□□□□ 0.35
PKP4-215ENST00000494945 APLP2Q06481 763 aa17.23■□□□□ 0.35
PKP4-215ENST00000494945 OSCARQ8IYS5 282 aa17.22■□□□□ 0.35
PKP4-215ENST00000494945 ERCC6L2Q5T890 1561 aa17.22■□□□□ 0.35
PKP4-215ENST00000494945 ABCA8O94911 1581 aa17.19■□□□□ 0.34
PKP4-215ENST00000494945 CCDC18Q5T9S5 1454 aa17.19■□□□□ 0.34
PKP4-215ENST00000494945 PTPRGP23470 1445 aa17.13■□□□□ 0.33
PKP4-215ENST00000494945 EPRSP07814 1512 aaKnown RBP17.13■□□□□ 0.33
PKP4-215ENST00000494945 NUP153P49790 1475 aaKnown RBP17.12■□□□□ 0.33
PKP4-215ENST00000494945 PLB1Q6P1J6 1458 aa17.12■□□□□ 0.33
PKP4-215ENST00000494945 LRRC9Q6ZRR7 1453 aa17.12■□□□□ 0.33
PKP4-215ENST00000494945 ATP1B4Q9UN42 357 aaPredicted RBP17.1■□□□□ 0.33
PKP4-215ENST00000494945 SUPT6HQ7KZ85 1726 aaKnown RBP17.1■□□□□ 0.33
PKP4-215ENST00000494945 PPARGC1BQ86YN6 1023 aaKnown RBP17.09■□□□□ 0.33
PKP4-215ENST00000494945 EHBP1L1Q8N3D4 1523 aa17.09■□□□□ 0.33
PKP4-215ENST00000494945 CDK13Q14004 1512 aaKnown RBP17.08■□□□□ 0.32
PKP4-215ENST00000494945 ABCC2Q92887 1545 aa17.08■□□□□ 0.32
PKP4-215ENST00000494945 TTBK1Q5TCY1 1321 aaPredicted RBP17.07■□□□□ 0.32
PKP4-215ENST00000494945 UACAQ9BZF9 1416 aa17.06■□□□□ 0.32
PKP4-215ENST00000494945 TRIM26Q12899 539 aaPredicted RBP17.05■□□□□ 0.32
PKP4-215ENST00000494945 UHRF1BP1LA0JNW5 1464 aa17.05■□□□□ 0.32
PKP4-215ENST00000494945 ADCY10Q96PN6 1610 aa17.04■□□□□ 0.32
PKP4-215ENST00000494945 KANK4Q5T7N3 995 aaPredicted RBP17.04■□□□□ 0.32
PKP4-215ENST00000494945 MAGI3Q5TCQ9 1506 aa17.03■□□□□ 0.32
PKP4-215ENST00000494945 ZCCHC11Q5TAX3 1644 aaKnown RBP17.03■□□□□ 0.32
PKP4-215ENST00000494945 ARHGEF11O15085 1522 aa17.02■□□□□ 0.32
PKP4-215ENST00000494945 RIMBP3CA6NJZ7 1639 aa17.02■□□□□ 0.31
PKP4-215ENST00000494945 RIMBP3BA6NNM3 1639 aa17.02■□□□□ 0.31
PKP4-215ENST00000494945 RIMBP3Q9UFD9 1639 aa17.02■□□□□ 0.31
PKP4-215ENST00000494945 MTUS2Q5JR59 1369 aa17.01■□□□□ 0.31
PKP4-215ENST00000494945 ATP10BO94823 1461 aa16.99■□□□□ 0.31
PKP4-215ENST00000494945 CDK11AQ9UQ88 783 aaPredicted RBP16.96■□□□□ 0.31
PKP4-215ENST00000494945 ITSN2Q9NZM3 1697 aa16.96■□□□□ 0.31
PKP4-215ENST00000494945 KDM5BQ9UGL1 1544 aa16.96■□□□□ 0.3
PKP4-215ENST00000494945 KIF14Q15058 1648 aa16.95■□□□□ 0.3
PKP4-215ENST00000494945 TROQ12816 1431 aaPredicted RBP16.95■□□□□ 0.3
PKP4-215ENST00000494945 NCOA2Q15596 1464 aa16.94■□□□□ 0.3
PKP4-215ENST00000494945 ARID3CA6NKF2 412 aa16.92■□□□□ 0.3
PKP4-215ENST00000494945 RRBP1Q9P2E9 1410 aaKnown RBP16.92■□□□□ 0.3
PKP4-215ENST00000494945 CDC42BPAQ5VT25 1732 aa16.92■□□□□ 0.3
PKP4-215ENST00000494945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.91■□□□□ 0.3
PKP4-215ENST00000494945 HNRNPUL2Q1KMD3 747 aaKnown RBP16.91■□□□□ 0.3
PKP4-215ENST00000494945 PCGF6Q9BYE7 350 aa16.91■□□□□ 0.3
PKP4-215ENST00000494945 PHLDB1Q86UU1 1377 aa16.89■□□□□ 0.29
PKP4-215ENST00000494945 MYO5CQ9NQX4 1742 aa16.87■□□□□ 0.29
PKP4-215ENST00000494945 PLEKHD1A6NEE1 506 aa16.87■□□□□ 0.29
PKP4-215ENST00000494945 MYOM3Q5VTT5 1437 aa16.87■□□□□ 0.29
PKP4-215ENST00000494945 PTPN23Q9H3S7 1636 aa16.85■□□□□ 0.29
PKP4-215ENST00000494945 CCNB3Q8WWL7 1395 aa16.84■□□□□ 0.29
PKP4-215ENST00000494945 CDC42BPBQ9Y5S2 1711 aa16.84■□□□□ 0.29
PKP4-215ENST00000494945 FGD6Q6ZV73 1430 aa16.83■□□□□ 0.28
PKP4-215ENST00000494945 PREX2Q70Z35 1606 aa16.83■□□□□ 0.28
PKP4-215ENST00000494945 ABCC10Q5T3U5 1492 aa16.81■□□□□ 0.28
PKP4-215ENST00000494945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.81■□□□□ 0.28
PKP4-215ENST00000494945 TTC37Q6PGP7 1564 aa16.81■□□□□ 0.28
PKP4-215ENST00000494945 MIA2Q96PC5 1412 aa16.8■□□□□ 0.28
PKP4-215ENST00000494945 WDR7Q9Y4E6 1490 aa16.8■□□□□ 0.28
PKP4-215ENST00000494945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.79■□□□□ 0.28
PKP4-215ENST00000494945 TCOF1Q13428 1488 aaKnown RBP16.78■□□□□ 0.28
PKP4-215ENST00000494945 ABCA9Q8IUA7 1624 aa16.78■□□□□ 0.28
PKP4-215ENST00000494945 MAPKBP1O60336 1514 aa16.76■□□□□ 0.27
PKP4-215ENST00000494945 GPATCH8Q9UKJ3 1502 aaKnown RBP16.76■□□□□ 0.27
PKP4-215ENST00000494945 NPM1P06748 294 aaKnown RBP eCLIP16.76■□□□□ 0.27
PKP4-215ENST00000494945 ASXL2Q76L83 1435 aa16.74■□□□□ 0.27
PKP4-215ENST00000494945 CROCC2H7BZ55 1655 aa16.74■□□□□ 0.27
PKP4-215ENST00000494945 CYB5RLQ6IPT4 315 aa16.73■□□□□ 0.27
PKP4-215ENST00000494945 DNMT1P26358 1616 aaKnown RBP16.73■□□□□ 0.27
PKP4-215ENST00000494945 ARAP3Q8WWN8 1544 aa16.71■□□□□ 0.27
PKP4-215ENST00000494945 ADGBQ8N7X0 1667 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 237.3 ms