RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 KIAA0586Q9BVV6 1533 aa27.15■■□□□ 1.94
YIF1A-209ENST00000494836 PRXQ9BXM0 1461 aa27.13■■□□□ 1.93
YIF1A-209ENST00000494836 ARAP1Q96P48 1450 aa27.13■■□□□ 1.93
YIF1A-209ENST00000494836 CSRNP3Q8WYN3 585 aa27.11■■□□□ 1.93
YIF1A-209ENST00000494836 JPH4Q96JJ6 628 aa27.08■■□□□ 1.93
YIF1A-209ENST00000494836 ERCC6L2Q5T890 1561 aa27.07■■□□□ 1.92
YIF1A-209ENST00000494836 FAM9AQ8IZU1 332 aaPredicted RBP27.06■■□□□ 1.92
YIF1A-209ENST00000494836 CYB5RLQ6IPT4 315 aa27.05■■□□□ 1.92
YIF1A-209ENST00000494836 PRG4Q92954 1404 aaPredicted RBP27.05■■□□□ 1.92
YIF1A-209ENST00000494836 IQGAP2Q13576 1575 aa27.04■■□□□ 1.92
YIF1A-209ENST00000494836 CTTNBP2Q8WZ74 1663 aa26.98■■□□□ 1.91
YIF1A-209ENST00000494836 KIF21BO75037 1637 aa26.92■■□□□ 1.9
YIF1A-209ENST00000494836 UGGT2Q9NYU1 1516 aa26.88■■□□□ 1.89
YIF1A-209ENST00000494836 CARMIL2Q6F5E8 1435 aa26.87■■□□□ 1.89
YIF1A-209ENST00000494836 DISP1Q96F81 1524 aa26.81■■□□□ 1.88
YIF1A-209ENST00000494836 KIAA0556O60303 1618 aa26.78■■□□□ 1.88
YIF1A-209ENST00000494836 GOLGA3Q08378 1498 aa26.76■■□□□ 1.87
YIF1A-209ENST00000494836 TNIKQ9UKE5 1360 aa26.76■■□□□ 1.87
YIF1A-209ENST00000494836 PTPRGP23470 1445 aa26.73■■□□□ 1.87
YIF1A-209ENST00000494836 EHMT2Q96KQ7 1210 aa26.69■■□□□ 1.86
YIF1A-209ENST00000494836 TTBK1Q5TCY1 1321 aaPredicted RBP26.68■■□□□ 1.86
YIF1A-209ENST00000494836 UBTFP17480 764 aaKnown RBP26.66■■□□□ 1.86
YIF1A-209ENST00000494836 ADCY10Q96PN6 1610 aa26.64■■□□□ 1.85
YIF1A-209ENST00000494836 SAMD9Q5K651 1589 aa26.63■■□□□ 1.85
YIF1A-209ENST00000494836 RANGAP1P46060 587 aaPredicted RBP26.58■■□□□ 1.85
YIF1A-209ENST00000494836 UACAQ9BZF9 1416 aa26.56■■□□□ 1.84
YIF1A-209ENST00000494836 EFCAB5A4FU69 1503 aa26.55■■□□□ 1.84
YIF1A-209ENST00000494836 NPM1P06748 294 aaKnown RBP eCLIP26.54■■□□□ 1.84
YIF1A-209ENST00000494836 P3H3Q8IVL6 736 aa26.54■■□□□ 1.84
YIF1A-209ENST00000494836 UHRF1BP1LA0JNW5 1464 aa26.54■■□□□ 1.84
YIF1A-209ENST00000494836 ABCC2Q92887 1545 aa26.54■■□□□ 1.84
YIF1A-209ENST00000494836 TRHP20396 242 aaPredicted RBP26.49■■□□□ 1.83
YIF1A-209ENST00000494836 PLB1Q6P1J6 1458 aa26.49■■□□□ 1.83
YIF1A-209ENST00000494836 FHOD3Q2V2M9 1422 aa26.47■■□□□ 1.83
YIF1A-209ENST00000494836 ABCA8O94911 1581 aa26.46■■□□□ 1.83
YIF1A-209ENST00000494836 MAPKBP1O60336 1514 aa26.46■■□□□ 1.83
YIF1A-209ENST00000494836 KDM5BQ9UGL1 1544 aa26.41■■□□□ 1.82
YIF1A-209ENST00000494836 ARHGAP35Q9NRY4 1499 aa26.39■■□□□ 1.82
YIF1A-209ENST00000494836 ZCCHC11Q5TAX3 1644 aaKnown RBP26.37■■□□□ 1.81
YIF1A-209ENST00000494836 RAPGEF6Q8TEU7 1601 aa26.36■■□□□ 1.81
YIF1A-209ENST00000494836 ASXL2Q76L83 1435 aa26.31■■□□□ 1.8
YIF1A-209ENST00000494836 ABCC10Q5T3U5 1492 aa26.31■■□□□ 1.8
YIF1A-209ENST00000494836 KIF13AQ9H1H9 1805 aa26.3■■□□□ 1.8
YIF1A-209ENST00000494836 DIP2BQ9P265 1576 aa26.29■■□□□ 1.8
YIF1A-209ENST00000494836 CLIP1P30622 1438 aa26.28■■□□□ 1.8
YIF1A-209ENST00000494836 FMN1Q68DA7 1419 aa26.28■■□□□ 1.8
YIF1A-209ENST00000494836 NUP153P49790 1475 aaKnown RBP26.25■■□□□ 1.79
YIF1A-209ENST00000494836 ARID3CA6NKF2 412 aa26.23■■□□□ 1.79
YIF1A-209ENST00000494836 FAM69CQ0P6D2 419 aa26.23■■□□□ 1.79
YIF1A-209ENST00000494836 ATP10BO94823 1461 aa26.23■■□□□ 1.79
YIF1A-209ENST00000494836 LOC105371045A0A1W2PR82 267 aa26.21■■□□□ 1.79
YIF1A-209ENST00000494836 WDR7Q9Y4E6 1490 aa26.21■■□□□ 1.79
YIF1A-209ENST00000494836 CEP162Q5TB80 1403 aa26.18■■□□□ 1.78
YIF1A-209ENST00000494836 HECW1Q76N89 1606 aa26.17■■□□□ 1.78
YIF1A-209ENST00000494836 EPRSP07814 1512 aaKnown RBP26.16■■□□□ 1.78
YIF1A-209ENST00000494836 GLI2P10070 1586 aa26.15■■□□□ 1.78
YIF1A-209ENST00000494836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.14■■□□□ 1.78
YIF1A-209ENST00000494836 HNRNPUL2Q1KMD3 747 aaKnown RBP26.14■■□□□ 1.78
YIF1A-209ENST00000494836 ATP1B4Q9UN42 357 aaPredicted RBP26.1■■□□□ 1.77
YIF1A-209ENST00000494836 PCF11O94913 1555 aaKnown RBP26.1■■□□□ 1.77
YIF1A-209ENST00000494836 CDK13Q14004 1512 aaKnown RBP26.08■■□□□ 1.77
YIF1A-209ENST00000494836 CASKIN1Q8WXD9 1431 aa26.07■■□□□ 1.76
YIF1A-209ENST00000494836 KCNH8Q96L42 1107 aa26.06■■□□□ 1.76
YIF1A-209ENST00000494836 TSPOAP1O95153 1857 aa26.05■■□□□ 1.76
YIF1A-209ENST00000494836 MAP3K4Q9Y6R4 1608 aa26.04■■□□□ 1.76
YIF1A-209ENST00000494836 FYCO1Q9BQS8 1478 aa26.04■■□□□ 1.76
YIF1A-209ENST00000494836 PLEKHD1A6NEE1 506 aa26.01■■□□□ 1.75
YIF1A-209ENST00000494836 LRRIQ1Q96JM4 1722 aa26■■□□□ 1.75
YIF1A-209ENST00000494836 CFAP43Q8NDM7 1665 aa25.99■■□□□ 1.75
YIF1A-209ENST00000494836 CCDC18Q5T9S5 1454 aa25.98■■□□□ 1.75
YIF1A-209ENST00000494836 PPRC1Q5VV67 1664 aaKnown RBP25.97■■□□□ 1.75
YIF1A-209ENST00000494836 ABCA9Q8IUA7 1624 aa25.95■■□□□ 1.74
YIF1A-209ENST00000494836 CDK11AQ9UQ88 783 aaPredicted RBP25.94■■□□□ 1.74
YIF1A-209ENST00000494836 CD109Q6YHK3 1445 aa25.94■■□□□ 1.74
YIF1A-209ENST00000494836 TEX14Q8IWB6 1497 aa25.92■■□□□ 1.74
YIF1A-209ENST00000494836 MAGI3Q5TCQ9 1506 aa25.89■■□□□ 1.74
YIF1A-209ENST00000494836 TROQ12816 1431 aaPredicted RBP25.87■■□□□ 1.73
YIF1A-209ENST00000494836 VPS8Q8N3P4 1428 aa25.87■■□□□ 1.73
YIF1A-209ENST00000494836 KDM6BO15054 1643 aa25.85■■□□□ 1.73
YIF1A-209ENST00000494836 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.85■■□□□ 1.73
YIF1A-209ENST00000494836 KIF14Q15058 1648 aa25.84■■□□□ 1.73
YIF1A-209ENST00000494836 TTC37Q6PGP7 1564 aa25.83■■□□□ 1.73
YIF1A-209ENST00000494836 NEO1Q92859 1461 aa25.72■■□□□ 1.71
YIF1A-209ENST00000494836 MYO5CQ9NQX4 1742 aa25.71■■□□□ 1.71
YIF1A-209ENST00000494836 MTUS2Q5JR59 1369 aa25.71■■□□□ 1.71
YIF1A-209ENST00000494836 COL17A1Q9UMD9 1497 aaPredicted RBP25.71■■□□□ 1.71
YIF1A-209ENST00000494836 PHLDB1Q86UU1 1377 aa25.7■■□□□ 1.71
YIF1A-209ENST00000494836 CFAP74Q9C0B2 1584 aa25.7■■□□□ 1.71
YIF1A-209ENST00000494836 TIAM1Q13009 1591 aa25.69■■□□□ 1.7
YIF1A-209ENST00000494836 FANCAO15360 1455 aa25.69■■□□□ 1.7
YIF1A-209ENST00000494836 PLCH2O75038 1416 aa25.69■■□□□ 1.7
YIF1A-209ENST00000494836 EHBP1L1Q8N3D4 1523 aa25.68■■□□□ 1.7
YIF1A-209ENST00000494836 ARAP3Q8WWN8 1544 aa25.67■■□□□ 1.7
YIF1A-209ENST00000494836 MAP3K1Q13233 1512 aa25.63■■□□□ 1.69
YIF1A-209ENST00000494836 PREX2Q70Z35 1606 aa25.62■■□□□ 1.69
YIF1A-209ENST00000494836 ARHGAP5Q13017 1502 aa25.62■■□□□ 1.69
YIF1A-209ENST00000494836 AKNAQ7Z591 1439 aa25.62■■□□□ 1.69
YIF1A-209ENST00000494836 EFCAB2Q5VUJ9 269 aa25.59■■□□□ 1.69
YIF1A-209ENST00000494836 CDC42BPAQ5VT25 1732 aa25.58■■□□□ 1.69
YIF1A-209ENST00000494836 CDC42BPBQ9Y5S2 1711 aa25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms