RNA–Protein interactions for RNA: ENST00000494655.5

CCDC12-207, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-207ENST00000494655 KIAA0586Q9BVV6 1533 aa34.94■■■■□ 3.18
CCDC12-207ENST00000494655 ERCC6L2Q5T890 1561 aa34.89■■■■□ 3.18
CCDC12-207ENST00000494655 PRG4Q92954 1404 aaPredicted RBP34.87■■■■□ 3.17
CCDC12-207ENST00000494655 JPH4Q96JJ6 628 aa34.85■■■■□ 3.17
CCDC12-207ENST00000494655 EEA1Q15075 1411 aa34.83■■■■□ 3.17
CCDC12-207ENST00000494655 IQGAP2Q13576 1575 aa34.82■■■■□ 3.16
CCDC12-207ENST00000494655 CTTNBP2Q8WZ74 1663 aa34.75■■■■□ 3.15
CCDC12-207ENST00000494655 PRXQ9BXM0 1461 aa34.74■■■■□ 3.15
CCDC12-207ENST00000494655 CHIC1Q5VXU3 224 aa34.73■■■■□ 3.15
CCDC12-207ENST00000494655 CSRNP3Q8WYN3 585 aa34.66■■■■□ 3.14
CCDC12-207ENST00000494655 CARMIL2Q6F5E8 1435 aa34.64■■■■□ 3.14
CCDC12-207ENST00000494655 UGGT2Q9NYU1 1516 aa34.56■■■■□ 3.12
CCDC12-207ENST00000494655 FAM9AQ8IZU1 332 aaPredicted RBP34.53■■■■□ 3.12
CCDC12-207ENST00000494655 KIF21BO75037 1637 aa34.48■■■■□ 3.11
CCDC12-207ENST00000494655 KIAA0556O60303 1618 aa34.47■■■■□ 3.11
CCDC12-207ENST00000494655 TNIKQ9UKE5 1360 aa34.47■■■■□ 3.11
CCDC12-207ENST00000494655 DISP1Q96F81 1524 aa34.46■■■■□ 3.11
CCDC12-207ENST00000494655 GOLGA3Q08378 1498 aa34.45■■■■□ 3.1
CCDC12-207ENST00000494655 PTPRGP23470 1445 aa34.44■■■■□ 3.1
CCDC12-207ENST00000494655 TRHP20396 242 aaPredicted RBP34.41■■■■□ 3.1
CCDC12-207ENST00000494655 ADCY10Q96PN6 1610 aa34.38■■■■□ 3.09
CCDC12-207ENST00000494655 TTBK1Q5TCY1 1321 aaPredicted RBP34.36■■■■□ 3.09
CCDC12-207ENST00000494655 NPM1P06748 294 aaKnown RBP eCLIP34.33■■■■□ 3.09
CCDC12-207ENST00000494655 UACAQ9BZF9 1416 aa34.21■■■■□ 3.07
CCDC12-207ENST00000494655 MAPKBP1O60336 1514 aa34.21■■■■□ 3.07
CCDC12-207ENST00000494655 ABCC2Q92887 1545 aa34.21■■■■□ 3.07
CCDC12-207ENST00000494655 UHRF1BP1LA0JNW5 1464 aa34.2■■■■□ 3.07
CCDC12-207ENST00000494655 SAMD9Q5K651 1589 aa34.19■■■■□ 3.06
CCDC12-207ENST00000494655 UBTFP17480 764 aaKnown RBP34.12■■■■□ 3.05
CCDC12-207ENST00000494655 EFCAB5A4FU69 1503 aa34.1■■■■□ 3.05
CCDC12-207ENST00000494655 EHMT2Q96KQ7 1210 aa34.09■■■■□ 3.05
CCDC12-207ENST00000494655 KIF13AQ9H1H9 1805 aa34.07■■■■□ 3.04
CCDC12-207ENST00000494655 RANGAP1P46060 587 aaPredicted RBP34.06■■■■□ 3.04
CCDC12-207ENST00000494655 PLB1Q6P1J6 1458 aa34.05■■■■□ 3.04
CCDC12-207ENST00000494655 ABCA8O94911 1581 aa34.04■■■■□ 3.04
CCDC12-207ENST00000494655 P3H3Q8IVL6 736 aa34.03■■■■□ 3.04
CCDC12-207ENST00000494655 ZCCHC11Q5TAX3 1644 aaKnown RBP34.03■■■■□ 3.04
CCDC12-207ENST00000494655 KDM5BQ9UGL1 1544 aa34.03■■■■□ 3.04
CCDC12-207ENST00000494655 ABCC10Q5T3U5 1492 aa34.01■■■■□ 3.04
CCDC12-207ENST00000494655 DIP2BQ9P265 1576 aa34.01■■■■□ 3.03
CCDC12-207ENST00000494655 ASXL2Q76L83 1435 aa33.95■■■■□ 3.02
CCDC12-207ENST00000494655 FHOD3Q2V2M9 1422 aa33.94■■■■□ 3.02
CCDC12-207ENST00000494655 RAPGEF6Q8TEU7 1601 aa33.92■■■■□ 3.02
CCDC12-207ENST00000494655 FAM69CQ0P6D2 419 aa33.9■■■■□ 3.02
CCDC12-207ENST00000494655 WDR7Q9Y4E6 1490 aa33.81■■■■□ 3
CCDC12-207ENST00000494655 GLI2P10070 1586 aa33.79■■■■□ 3
CCDC12-207ENST00000494655 ARHGAP35Q9NRY4 1499 aa33.77■■■■□ 3
CCDC12-207ENST00000494655 TSPOAP1O95153 1857 aa33.75■■■□□ 2.99
CCDC12-207ENST00000494655 EPRSP07814 1512 aaKnown RBP33.74■■■□□ 2.99
CCDC12-207ENST00000494655 FMN1Q68DA7 1419 aa33.74■■■□□ 2.99
CCDC12-207ENST00000494655 NUP153P49790 1475 aaKnown RBP33.7■■■□□ 2.99
CCDC12-207ENST00000494655 ARID3CA6NKF2 412 aa33.7■■■□□ 2.99
CCDC12-207ENST00000494655 ATP10BO94823 1461 aa33.69■■■□□ 2.98
CCDC12-207ENST00000494655 HECW1Q76N89 1606 aa33.66■■■□□ 2.98
CCDC12-207ENST00000494655 MAP3K4Q9Y6R4 1608 aa33.66■■■□□ 2.98
CCDC12-207ENST00000494655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.65■■■□□ 2.98
CCDC12-207ENST00000494655 HNRNPUL2Q1KMD3 747 aaKnown RBP33.65■■■□□ 2.98
CCDC12-207ENST00000494655 CFAP43Q8NDM7 1665 aa33.61■■■□□ 2.97
CCDC12-207ENST00000494655 CLIP1P30622 1438 aa33.6■■■□□ 2.97
CCDC12-207ENST00000494655 TEX14Q8IWB6 1497 aa33.56■■■□□ 2.96
CCDC12-207ENST00000494655 PPRC1Q5VV67 1664 aaKnown RBP33.56■■■□□ 2.96
CCDC12-207ENST00000494655 KCNH8Q96L42 1107 aa33.55■■■□□ 2.96
CCDC12-207ENST00000494655 KDM6BO15054 1643 aa33.54■■■□□ 2.96
CCDC12-207ENST00000494655 ATP1B4Q9UN42 357 aaPredicted RBP33.51■■■□□ 2.95
CCDC12-207ENST00000494655 CDK13Q14004 1512 aaKnown RBP33.48■■■□□ 2.95
CCDC12-207ENST00000494655 PCF11O94913 1555 aaKnown RBP33.47■■■□□ 2.95
CCDC12-207ENST00000494655 ABCA9Q8IUA7 1624 aa33.46■■■□□ 2.95
CCDC12-207ENST00000494655 CD109Q6YHK3 1445 aa33.46■■■□□ 2.95
CCDC12-207ENST00000494655 PLEKHD1A6NEE1 506 aa33.45■■■□□ 2.95
CCDC12-207ENST00000494655 CEP162Q5TB80 1403 aa33.43■■■□□ 2.94
CCDC12-207ENST00000494655 MAGI3Q5TCQ9 1506 aa33.42■■■□□ 2.94
CCDC12-207ENST00000494655 CASKIN1Q8WXD9 1431 aa33.41■■■□□ 2.94
CCDC12-207ENST00000494655 FYCO1Q9BQS8 1478 aa33.4■■■□□ 2.94
CCDC12-207ENST00000494655 CCDC18Q5T9S5 1454 aa33.38■■■□□ 2.93
CCDC12-207ENST00000494655 CDK11AQ9UQ88 783 aaPredicted RBP33.37■■■□□ 2.93
CCDC12-207ENST00000494655 LRRIQ1Q96JM4 1722 aa33.36■■■□□ 2.93
CCDC12-207ENST00000494655 KIF14Q15058 1648 aa33.28■■■□□ 2.92
CCDC12-207ENST00000494655 LOC105371045A0A1W2PR82 267 aa33.26■■■□□ 2.91
CCDC12-207ENST00000494655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.25■■■□□ 2.912e-6■■■□□ 16.6
CCDC12-207ENST00000494655 TTC37Q6PGP7 1564 aa33.25■■■□□ 2.91
CCDC12-207ENST00000494655 CFAP74Q9C0B2 1584 aa33.23■■■□□ 2.91
CCDC12-207ENST00000494655 TROQ12816 1431 aaPredicted RBP33.22■■■□□ 2.91
CCDC12-207ENST00000494655 PHLDB1Q86UU1 1377 aa33.19■■■□□ 2.9
CCDC12-207ENST00000494655 NEO1Q92859 1461 aa33.18■■■□□ 2.9
CCDC12-207ENST00000494655 MYO5CQ9NQX4 1742 aa33.16■■■□□ 2.9
CCDC12-207ENST00000494655 COL17A1Q9UMD9 1497 aaPredicted RBP33.13■■■□□ 2.89
CCDC12-207ENST00000494655 ARAP3Q8WWN8 1544 aa33.12■■■□□ 2.89
CCDC12-207ENST00000494655 FANCAO15360 1455 aa33.11■■■□□ 2.89
CCDC12-207ENST00000494655 VPS8Q8N3P4 1428 aa33.04■■■□□ 2.88
CCDC12-207ENST00000494655 PLCH2O75038 1416 aa33.03■■■□□ 2.88
CCDC12-207ENST00000494655 AKNAQ7Z591 1439 aa33■■■□□ 2.87
CCDC12-207ENST00000494655 ARHGAP5Q13017 1502 aa32.99■■■□□ 2.87
CCDC12-207ENST00000494655 MTUS2Q5JR59 1369 aa32.98■■■□□ 2.87
CCDC12-207ENST00000494655 PREX2Q70Z35 1606 aa32.97■■■□□ 2.87
CCDC12-207ENST00000494655 EHBP1L1Q8N3D4 1523 aa32.97■■■□□ 2.87
CCDC12-207ENST00000494655 DENND4BO75064 1496 aaPredicted RBP32.94■■■□□ 2.86
CCDC12-207ENST00000494655 ADGRL1O94910 1474 aa32.93■■■□□ 2.86
CCDC12-207ENST00000494655 EFCAB2Q5VUJ9 269 aa32.92■■■□□ 2.86
CCDC12-207ENST00000494655 RICTORQ6R327 1708 aa32.91■■■□□ 2.86
CCDC12-207ENST00000494655 FRMPD1Q5SYB0 1578 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms