RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
ITGB1-217ENST00000494395 SYNJ2O15056 1496 aa15.16■□□□□ 0.02
ITGB1-217ENST00000494395 ERICH3Q5RHP9 1530 aa15.16■□□□□ 0.02
ITGB1-217ENST00000494395 ADAMTS12P58397 1594 aa15.15■□□□□ 0.02
ITGB1-217ENST00000494395 CLASP1Q7Z460 1538 aa15.11■□□□□ 0.01
ITGB1-217ENST00000494395 FBLN2P98095 1184 aa15.08■□□□□ 0
ITGB1-217ENST00000494395 FHAD1B1AJZ9 1412 aa15.08■□□□□ 0
ITGB1-217ENST00000494395 CHMP7Q8WUX9 453 aaPredicted RBP15.07■□□□□ 0
ITGB1-217ENST00000494395 KIF27Q86VH2 1401 aa15.07■□□□□ 0
ITGB1-217ENST00000494395 GRIN2AQ12879 1464 aa15.07■□□□□ 0
ITGB1-217ENST00000494395 RIMBP3CA6NJZ7 1639 aa15.05■□□□□ -0
ITGB1-217ENST00000494395 RIMBP3BA6NNM3 1639 aa15.05■□□□□ -0
ITGB1-217ENST00000494395 RIMBP3Q9UFD9 1639 aa15.05■□□□□ -0
ITGB1-217ENST00000494395 ARHGEF11O15085 1522 aa15.03■□□□□ -0
ITGB1-217ENST00000494395 NUP160Q12769 1436 aa15.03■□□□□ -0
ITGB1-217ENST00000494395 IGF1RP08069 1367 aa15.03■□□□□ -0
ITGB1-217ENST00000494395 CUL7Q14999 1698 aa15.03■□□□□ -0
ITGB1-217ENST00000494395 CEP170Q5SW79 1584 aa15.02■□□□□ -0
ITGB1-217ENST00000494395 SLC4A2P04920 1241 aa15.02■□□□□ -0
ITGB1-217ENST00000494395 RUSC2Q8N2Y8 1516 aa14.98□□□□□ -0.01
ITGB1-217ENST00000494395 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
ITGB1-217ENST00000494395 SHROOM2Q13796 1616 aa14.95□□□□□ -0.02
ITGB1-217ENST00000494395 ARAP1Q96P48 1450 aa14.93□□□□□ -0.02
ITGB1-217ENST00000494395 CARMIL1Q5VZK9 1371 aa14.92□□□□□ -0.02
ITGB1-217ENST00000494395 ERCC6L2Q5T890 1561 aa14.88□□□□□ -0.03
ITGB1-217ENST00000494395 KIAA0586Q9BVV6 1533 aa14.86□□□□□ -0.03
ITGB1-217ENST00000494395 RAPGEF2Q9Y4G8 1499 aa14.85□□□□□ -0.03
ITGB1-217ENST00000494395 DCAF8L1A6NGE4 600 aa14.85□□□□□ -0.03
ITGB1-217ENST00000494395 PRXQ9BXM0 1461 aa14.83□□□□□ -0.03
ITGB1-217ENST00000494395 JPH4Q96JJ6 628 aa14.8□□□□□ -0.04
ITGB1-217ENST00000494395 EEA1Q15075 1411 aa14.8□□□□□ -0.04
ITGB1-217ENST00000494395 CYB5RLQ6IPT4 315 aa14.79□□□□□ -0.04
ITGB1-217ENST00000494395 PRG4Q92954 1404 aaPredicted RBP14.79□□□□□ -0.04
ITGB1-217ENST00000494395 IQGAP2Q13576 1575 aa14.78□□□□□ -0.04
ITGB1-217ENST00000494395 MYCNP04198 464 aaPredicted RBP14.78□□□□□ -0.04
ITGB1-217ENST00000494395 CTTNBP2Q8WZ74 1663 aa14.77□□□□□ -0.05
ITGB1-217ENST00000494395 UGGT2Q9NYU1 1516 aa14.72□□□□□ -0.05
ITGB1-217ENST00000494395 DISP1Q96F81 1524 aa14.7□□□□□ -0.06
ITGB1-217ENST00000494395 KIF21BO75037 1637 aa14.7□□□□□ -0.06
ITGB1-217ENST00000494395 KIAA0556O60303 1618 aa14.66□□□□□ -0.06
ITGB1-217ENST00000494395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.66□□□□□ -0.06
ITGB1-217ENST00000494395 CARMIL2Q6F5E8 1435 aa14.65□□□□□ -0.06
ITGB1-217ENST00000494395 ADCY10Q96PN6 1610 aa14.63□□□□□ -0.07
ITGB1-217ENST00000494395 ATXN8OSP0DMR3 200 aa14.63□□□□□ -0.07
ITGB1-217ENST00000494395 FAM9AQ8IZU1 332 aaPredicted RBP14.63□□□□□ -0.07
ITGB1-217ENST00000494395 TNIKQ9UKE5 1360 aa14.62□□□□□ -0.07
ITGB1-217ENST00000494395 PTPRGP23470 1445 aa14.59□□□□□ -0.07
ITGB1-217ENST00000494395 SAMD9Q5K651 1589 aa14.58□□□□□ -0.08
ITGB1-217ENST00000494395 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
ITGB1-217ENST00000494395 UHRF1BP1LA0JNW5 1464 aa14.55□□□□□ -0.08
ITGB1-217ENST00000494395 MAPKBP1O60336 1514 aa14.53□□□□□ -0.08
ITGB1-217ENST00000494395 ABCC2Q92887 1545 aa14.53□□□□□ -0.08
ITGB1-217ENST00000494395 UACAQ9BZF9 1416 aa14.52□□□□□ -0.08
ITGB1-217ENST00000494395 ABCA8O94911 1581 aa14.51□□□□□ -0.09
ITGB1-217ENST00000494395 KIF13AQ9H1H9 1805 aa14.5□□□□□ -0.09
ITGB1-217ENST00000494395 U3KPZ7 1027 aaPredicted RBP14.49□□□□□ -0.09
ITGB1-217ENST00000494395 PLB1Q6P1J6 1458 aa14.49□□□□□ -0.09
ITGB1-217ENST00000494395 KDM5BQ9UGL1 1544 aa14.48□□□□□ -0.09
ITGB1-217ENST00000494395 EFCAB5A4FU69 1503 aa14.47□□□□□ -0.09
ITGB1-217ENST00000494395 TTBK1Q5TCY1 1321 aaPredicted RBP14.46□□□□□ -0.09
ITGB1-217ENST00000494395 ZCCHC11Q5TAX3 1644 aaKnown RBP14.46□□□□□ -0.09
ITGB1-217ENST00000494395 TRHP20396 242 aaPredicted RBP14.45□□□□□ -0.1
ITGB1-217ENST00000494395 DIP2BQ9P265 1576 aa14.45□□□□□ -0.1
ITGB1-217ENST00000494395 ABCC10Q5T3U5 1492 aa14.44□□□□□ -0.1
ITGB1-217ENST00000494395 FHOD3Q2V2M9 1422 aa14.43□□□□□ -0.1
ITGB1-217ENST00000494395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
ITGB1-217ENST00000494395 NPM1P06748 294 aaKnown RBP eCLIP14.42□□□□□ -0.1
ITGB1-217ENST00000494395 UBTFP17480 764 aaKnown RBP14.42□□□□□ -0.1
ITGB1-217ENST00000494395 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
ITGB1-217ENST00000494395 P3H3Q8IVL6 736 aa14.42□□□□□ -0.1
ITGB1-217ENST00000494395 RAPGEF6Q8TEU7 1601 aa14.41□□□□□ -0.1
ITGB1-217ENST00000494395 ARHGAP35Q9NRY4 1499 aa14.41□□□□□ -0.1
ITGB1-217ENST00000494395 ASXL2Q76L83 1435 aa14.41□□□□□ -0.1
ITGB1-217ENST00000494395 SAMD1Q6SPF0 538 aaPredicted RBP14.4□□□□□ -0.1
ITGB1-217ENST00000494395 ATF5Q9Y2D1 282 aaPredicted RBP14.38□□□□□ -0.11
ITGB1-217ENST00000494395 RANGAP1P46060 587 aaPredicted RBP14.37□□□□□ -0.11
ITGB1-217ENST00000494395 GLI2P10070 1586 aa14.36□□□□□ -0.11
ITGB1-217ENST00000494395 ATP10BO94823 1461 aa14.36□□□□□ -0.11
ITGB1-217ENST00000494395 NUP153P49790 1475 aaKnown RBP14.36□□□□□ -0.11
ITGB1-217ENST00000494395 WDR7Q9Y4E6 1490 aa14.34□□□□□ -0.11
ITGB1-217ENST00000494395 EPRSP07814 1512 aaKnown RBP14.34□□□□□ -0.11
ITGB1-217ENST00000494395 FAM69CQ0P6D2 419 aa14.33□□□□□ -0.12
ITGB1-217ENST00000494395 PPRC1Q5VV67 1664 aaKnown RBP14.32□□□□□ -0.12
ITGB1-217ENST00000494395 MAP3K4Q9Y6R4 1608 aa14.31□□□□□ -0.12
ITGB1-217ENST00000494395 FMN1Q68DA7 1419 aa14.31□□□□□ -0.12
ITGB1-217ENST00000494395 TSPOAP1O95153 1857 aa14.29□□□□□ -0.12
ITGB1-217ENST00000494395 HECW1Q76N89 1606 aa14.28□□□□□ -0.12
ITGB1-217ENST00000494395 CLIP1P30622 1438 aa14.27□□□□□ -0.12
ITGB1-217ENST00000494395 LRRIQ1Q96JM4 1722 aa14.27□□□□□ -0.13
ITGB1-217ENST00000494395 CFAP43Q8NDM7 1665 aa14.26□□□□□ -0.13
ITGB1-217ENST00000494395 CDK13Q14004 1512 aaKnown RBP14.25□□□□□ -0.13
ITGB1-217ENST00000494395 PCF11O94913 1555 aaKnown RBP14.25□□□□□ -0.13
ITGB1-217ENST00000494395 ARID3CA6NKF2 412 aa14.24□□□□□ -0.13
ITGB1-217ENST00000494395 ABCA9Q8IUA7 1624 aa14.23□□□□□ -0.13
ITGB1-217ENST00000494395 CEP162Q5TB80 1403 aa14.23□□□□□ -0.13
ITGB1-217ENST00000494395 CASKIN1Q8WXD9 1431 aa14.21□□□□□ -0.13
ITGB1-217ENST00000494395 LOC105371045A0A1W2PR82 267 aa14.2□□□□□ -0.14
ITGB1-217ENST00000494395 MAGI3Q5TCQ9 1506 aa14.2□□□□□ -0.14
ITGB1-217ENST00000494395 FYCO1Q9BQS8 1478 aa14.19□□□□□ -0.14
ITGB1-217ENST00000494395 KCNH8Q96L42 1107 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms