RNA–Protein interactions for RNA: ENST00000494014.1

EPHA3-203, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-203ENST00000494014 FHAD1B1AJZ9 1412 aa10.99□□□□□ -0.65
EPHA3-203ENST00000494014 CEP170Q5SW79 1584 aa10.99□□□□□ -0.65
EPHA3-203ENST00000494014 CUL7Q14999 1698 aa10.95□□□□□ -0.66
EPHA3-203ENST00000494014 CENPBP07199 599 aaPredicted RBP10.94□□□□□ -0.66
EPHA3-203ENST00000494014 RUSC2Q8N2Y8 1516 aa10.94□□□□□ -0.66
EPHA3-203ENST00000494014 NEUROD1Q13562 356 aa10.91□□□□□ -0.66
EPHA3-203ENST00000494014 CHMP7Q8WUX9 453 aaPredicted RBP10.91□□□□□ -0.66
EPHA3-203ENST00000494014 GTF3C3Q9Y5Q9 886 aa10.88□□□□□ -0.67
EPHA3-203ENST00000494014 MAPKBP1O60336 1514 aa10.87□□□□□ -0.67
EPHA3-203ENST00000494014 KIF13AQ9H1H9 1805 aa10.85□□□□□ -0.67
EPHA3-203ENST00000494014 ERCC6L2Q5T890 1561 aa10.85□□□□□ -0.67
EPHA3-203ENST00000494014 LOC105371045A0A1W2PR82 267 aa10.85□□□□□ -0.67
EPHA3-203ENST00000494014 CYB5RLQ6IPT4 315 aa10.84□□□□□ -0.67
EPHA3-203ENST00000494014 KIAA0586Q9BVV6 1533 aa10.82□□□□□ -0.68
EPHA3-203ENST00000494014 FBLN2P98095 1184 aa10.8□□□□□ -0.68
EPHA3-203ENST00000494014 KIF27Q86VH2 1401 aa10.78□□□□□ -0.68
EPHA3-203ENST00000494014 ADCY10Q96PN6 1610 aa10.77□□□□□ -0.68
EPHA3-203ENST00000494014 UHRF1BP1LA0JNW5 1464 aa10.77□□□□□ -0.69
EPHA3-203ENST00000494014 DIP2BQ9P265 1576 aa10.76□□□□□ -0.69
EPHA3-203ENST00000494014 PRG4Q92954 1404 aaPredicted RBP10.76□□□□□ -0.69
EPHA3-203ENST00000494014 GLI2P10070 1586 aa10.76□□□□□ -0.69
EPHA3-203ENST00000494014 ABCC10Q5T3U5 1492 aa10.75□□□□□ -0.69
EPHA3-203ENST00000494014 IGF1RP08069 1367 aa10.75□□□□□ -0.69
EPHA3-203ENST00000494014 UGGT2Q9NYU1 1516 aa10.72□□□□□ -0.69
EPHA3-203ENST00000494014 IQGAP2Q13576 1575 aa10.71□□□□□ -0.69
EPHA3-203ENST00000494014 DIEXFQ68CQ4 756 aaKnown RBP10.7□□□□□ -0.7
EPHA3-203ENST00000494014 JPH4Q96JJ6 628 aa10.69□□□□□ -0.7
EPHA3-203ENST00000494014 CTTNBP2Q8WZ74 1663 aa10.68□□□□□ -0.7
EPHA3-203ENST00000494014 ABCC2Q92887 1545 aa10.66□□□□□ -0.7
EPHA3-203ENST00000494014 PPRC1Q5VV67 1664 aaKnown RBP10.66□□□□□ -0.7
EPHA3-203ENST00000494014 TRHP20396 242 aaPredicted RBP10.65□□□□□ -0.7
EPHA3-203ENST00000494014 MAP3K4Q9Y6R4 1608 aa10.64□□□□□ -0.71
EPHA3-203ENST00000494014 CARMIL2Q6F5E8 1435 aa10.64□□□□□ -0.71
EPHA3-203ENST00000494014 DISP1Q96F81 1524 aa10.64□□□□□ -0.71
EPHA3-203ENST00000494014 CARMIL1Q5VZK9 1371 aa10.64□□□□□ -0.71
EPHA3-203ENST00000494014 TNIKQ9UKE5 1360 aa10.64□□□□□ -0.71
EPHA3-203ENST00000494014 KIAA0556O60303 1618 aa10.64□□□□□ -0.71
EPHA3-203ENST00000494014 KDM5BQ9UGL1 1544 aa10.64□□□□□ -0.71
EPHA3-203ENST00000494014 PLB1Q6P1J6 1458 aa10.63□□□□□ -0.71
EPHA3-203ENST00000494014 RAPGEF2Q9Y4G8 1499 aa10.63□□□□□ -0.71
EPHA3-203ENST00000494014 BCL11AQ9H165 835 aa10.61□□□□□ -0.71
EPHA3-203ENST00000494014 KDM6BO15054 1643 aa10.59□□□□□ -0.71
EPHA3-203ENST00000494014 ZCCHC11Q5TAX3 1644 aaKnown RBP10.58□□□□□ -0.72
EPHA3-203ENST00000494014 PTPRGP23470 1445 aa10.58□□□□□ -0.72
EPHA3-203ENST00000494014 UACAQ9BZF9 1416 aa10.58□□□□□ -0.72
EPHA3-203ENST00000494014 GOLGA3Q08378 1498 aa10.58□□□□□ -0.72
EPHA3-203ENST00000494014 ABCA8O94911 1581 aa10.58□□□□□ -0.72
EPHA3-203ENST00000494014 PRXQ9BXM0 1461 aa10.58□□□□□ -0.72
EPHA3-203ENST00000494014 CFAP43Q8NDM7 1665 aa10.57□□□□□ -0.72
EPHA3-203ENST00000494014 CCER1Q8TC90 406 aaPredicted RBP10.57□□□□□ -0.72
EPHA3-203ENST00000494014 CLSPNQ9HAW4 1339 aa10.57□□□□□ -0.72
EPHA3-203ENST00000494014 ANP32EQ9BTT0 268 aa10.54□□□□□ -0.72
EPHA3-203ENST00000494014 EPRSP07814 1512 aaKnown RBP10.54□□□□□ -0.72
EPHA3-203ENST00000494014 SAMD9Q5K651 1589 aa10.54□□□□□ -0.72
EPHA3-203ENST00000494014 TEX14Q8IWB6 1497 aa10.54□□□□□ -0.72
EPHA3-203ENST00000494014 ASXL2Q76L83 1435 aa10.53□□□□□ -0.72
EPHA3-203ENST00000494014 MAGI3Q5TCQ9 1506 aa10.53□□□□□ -0.72
EPHA3-203ENST00000494014 NPM1P06748 294 aaKnown RBP eCLIP10.52□□□□□ -0.73
EPHA3-203ENST00000494014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.51□□□□□ -0.73
EPHA3-203ENST00000494014 EEA1Q15075 1411 aa10.51□□□□□ -0.73
EPHA3-203ENST00000494014 WDR7Q9Y4E6 1490 aa10.49□□□□□ -0.73
EPHA3-203ENST00000494014 ZNF316A6NFI3 1004 aaPredicted RBP10.49□□□□□ -0.73
EPHA3-203ENST00000494014 FAM9AQ8IZU1 332 aaPredicted RBP10.48□□□□□ -0.73
EPHA3-203ENST00000494014 FAM69CQ0P6D2 419 aa10.47□□□□□ -0.73
EPHA3-203ENST00000494014 TSPOAP1O95153 1857 aa10.47□□□□□ -0.73
EPHA3-203ENST00000494014 ABCA9Q8IUA7 1624 aa10.47□□□□□ -0.73
EPHA3-203ENST00000494014 PHLDB1Q86UU1 1377 aa10.47□□□□□ -0.73
EPHA3-203ENST00000494014 ARAP3Q8WWN8 1544 aa10.45□□□□□ -0.74
EPHA3-203ENST00000494014 KIF21BO75037 1637 aa10.44□□□□□ -0.74
EPHA3-203ENST00000494014 YTHDC1Q96MU7 727 aaKnown RBP10.43□□□□□ -0.74
EPHA3-203ENST00000494014 EFCAB5A4FU69 1503 aa10.43□□□□□ -0.74
EPHA3-203ENST00000494014 RAPGEF6Q8TEU7 1601 aa10.41□□□□□ -0.74
EPHA3-203ENST00000494014 CFAP74Q9C0B2 1584 aa10.41□□□□□ -0.74
EPHA3-203ENST00000494014 NEO1Q92859 1461 aa10.39□□□□□ -0.75
EPHA3-203ENST00000494014 AEBP2Q6ZN18 517 aaPredicted RBP10.39□□□□□ -0.75
EPHA3-203ENST00000494014 COL17A1Q9UMD9 1497 aaPredicted RBP10.37□□□□□ -0.75
EPHA3-203ENST00000494014 TSHZ2Q9NRE2 1034 aa10.36□□□□□ -0.75
EPHA3-203ENST00000494014 ATP10BO94823 1461 aa10.35□□□□□ -0.75
EPHA3-203ENST00000494014 MIER1Q8N108 512 aa10.35□□□□□ -0.75
EPHA3-203ENST00000494014 ADGRL1O94910 1474 aa10.35□□□□□ -0.75
EPHA3-203ENST00000494014 SUPT16HQ9Y5B9 1047 aaKnown RBP10.35□□□□□ -0.75
EPHA3-203ENST00000494014 ZMYM4Q5VZL5 1548 aa10.34□□□□□ -0.75
EPHA3-203ENST00000494014 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
EPHA3-203ENST00000494014 ADAMTSL3P82987 1691 aa10.34□□□□□ -0.75
EPHA3-203ENST00000494014 KDM4FA0A1W2PPD8 638 aa10.34□□□□□ -0.75
EPHA3-203ENST00000494014 CD109Q6YHK3 1445 aa10.34□□□□□ -0.75
EPHA3-203ENST00000494014 FRMPD1Q5SYB0 1578 aa10.33□□□□□ -0.75
EPHA3-203ENST00000494014 PRKCSHP14314 528 aaPredicted RBP10.33□□□□□ -0.76
EPHA3-203ENST00000494014 RICTORQ6R327 1708 aa10.31□□□□□ -0.76
EPHA3-203ENST00000494014 ERICH6Q7L0X2 663 aa10.31□□□□□ -0.76
EPHA3-203ENST00000494014 NUP153P49790 1475 aaKnown RBP10.31□□□□□ -0.76
EPHA3-203ENST00000494014 ARHGEF40Q8TER5 1519 aa10.3□□□□□ -0.76
EPHA3-203ENST00000494014 BCORL1Q5H9F3 1711 aa10.29□□□□□ -0.76
EPHA3-203ENST00000494014 MAGI2Q86UL8 1455 aa10.28□□□□□ -0.76
EPHA3-203ENST00000494014 FHOD3Q2V2M9 1422 aa10.27□□□□□ -0.77
EPHA3-203ENST00000494014 HECW1Q76N89 1606 aa10.26□□□□□ -0.77
EPHA3-203ENST00000494014 REREQ9P2R6 1566 aa10.26□□□□□ -0.77
EPHA3-203ENST00000494014 HECW2Q9P2P5 1572 aa10.24□□□□□ -0.77
EPHA3-203ENST00000494014 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.24□□□□□ -0.77
EPHA3-203ENST00000494014 MYO5CQ9NQX4 1742 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms