RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 PBRM1Q86U86 1689 aa16.4■□□□□ 0.22
PHACTR4-204ENST00000493669 TIAM1Q13009 1591 aa16.37■□□□□ 0.21
PHACTR4-204ENST00000493669 AQRO60306 1485 aaKnown RBP eCLIP16.37■□□□□ 0.213e-6■■■■□ 24.1
PHACTR4-204ENST00000493669 CCER1Q8TC90 406 aaPredicted RBP16.37■□□□□ 0.21
PHACTR4-204ENST00000493669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.35■□□□□ 0.21
PHACTR4-204ENST00000493669 GRIN2BQ13224 1484 aa16.34■□□□□ 0.21
PHACTR4-204ENST00000493669 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
PHACTR4-204ENST00000493669 RRBP1Q9P2E9 1410 aaKnown RBP16.34■□□□□ 0.21
PHACTR4-204ENST00000493669 KANK4Q5T7N3 995 aaPredicted RBP16.34■□□□□ 0.21
PHACTR4-204ENST00000493669 FYCO1Q9BQS8 1478 aa16.34■□□□□ 0.21
PHACTR4-204ENST00000493669 SAMD9Q5K651 1589 aa16.34■□□□□ 0.21
PHACTR4-204ENST00000493669 CFAP43Q8NDM7 1665 aa16.33■□□□□ 0.21
PHACTR4-204ENST00000493669 PCF11O94913 1555 aaKnown RBP16.33■□□□□ 0.2
PHACTR4-204ENST00000493669 ERCC6Q03468 1493 aa16.31■□□□□ 0.2
PHACTR4-204ENST00000493669 FMN1Q68DA7 1419 aa16.31■□□□□ 0.2
PHACTR4-204ENST00000493669 CASKIN1Q8WXD9 1431 aa16.31■□□□□ 0.2
PHACTR4-204ENST00000493669 THOC2Q8NI27 1593 aaKnown RBP16.31■□□□□ 0.2
PHACTR4-204ENST00000493669 FHOD3Q2V2M9 1422 aa16.3■□□□□ 0.2
PHACTR4-204ENST00000493669 LRRC9Q6ZRR7 1453 aa16.29■□□□□ 0.2
PHACTR4-204ENST00000493669 HNRNPUL2Q1KMD3 747 aaKnown RBP16.25■□□□□ 0.19
PHACTR4-204ENST00000493669 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
PHACTR4-204ENST00000493669 CCNB3Q8WWL7 1395 aa16.24■□□□□ 0.19
PHACTR4-204ENST00000493669 SNAPC4Q5SXM2 1469 aa16.24■□□□□ 0.19
PHACTR4-204ENST00000493669 IQGAP2Q13576 1575 aa16.23■□□□□ 0.19
PHACTR4-204ENST00000493669 EIF4G3O43432 1585 aaKnown RBP16.23■□□□□ 0.19
PHACTR4-204ENST00000493669 P3H3Q8IVL6 736 aa16.22■□□□□ 0.19
PHACTR4-204ENST00000493669 MAGI1Q96QZ7 1491 aaPredicted RBP16.18■□□□□ 0.18
PHACTR4-204ENST00000493669 UGGT2Q9NYU1 1516 aa16.17■□□□□ 0.18
PHACTR4-204ENST00000493669 KIAA0586Q9BVV6 1533 aa16.15■□□□□ 0.18
PHACTR4-204ENST00000493669 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
PHACTR4-204ENST00000493669 CLSPNQ9HAW4 1339 aa16.13■□□□□ 0.17
PHACTR4-204ENST00000493669 PHLDB1Q86UU1 1377 aa16.13■□□□□ 0.17
PHACTR4-204ENST00000493669 CCDC18Q5T9S5 1454 aa16.12■□□□□ 0.17
PHACTR4-204ENST00000493669 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.12■□□□□ 0.17
PHACTR4-204ENST00000493669 HECW1Q76N89 1606 aa16.1■□□□□ 0.17
PHACTR4-204ENST00000493669 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
PHACTR4-204ENST00000493669 ATP1B4Q9UN42 357 aaPredicted RBP16.1■□□□□ 0.17
PHACTR4-204ENST00000493669 LRRIQ1Q96JM4 1722 aa16.09■□□□□ 0.17
PHACTR4-204ENST00000493669 EHBP1L1Q8N3D4 1523 aa16.09■□□□□ 0.17
PHACTR4-204ENST00000493669 MTUS2Q5JR59 1369 aa16.07■□□□□ 0.16
PHACTR4-204ENST00000493669 KIAA0556O60303 1618 aa16.06■□□□□ 0.16
PHACTR4-204ENST00000493669 DHX57Q6P158 1386 aaKnown RBP16.04■□□□□ 0.16
PHACTR4-204ENST00000493669 SUPT6HQ7KZ85 1726 aaKnown RBP16.04■□□□□ 0.16
PHACTR4-204ENST00000493669 DISP1Q96F81 1524 aa16.03■□□□□ 0.16
PHACTR4-204ENST00000493669 NUP160Q12769 1436 aa16.02■□□□□ 0.15
PHACTR4-204ENST00000493669 FGD6Q6ZV73 1430 aa16.02■□□□□ 0.15
PHACTR4-204ENST00000493669 CEP170Q5SW79 1584 aa16.01■□□□□ 0.15
PHACTR4-204ENST00000493669 ARHGEF11O15085 1522 aa16.01■□□□□ 0.15
PHACTR4-204ENST00000493669 EPRSP07814 1512 aaKnown RBP16.01■□□□□ 0.15
PHACTR4-204ENST00000493669 CHMP7Q8WUX9 453 aaPredicted RBP16■□□□□ 0.15
PHACTR4-204ENST00000493669 NCOA2Q15596 1464 aa16■□□□□ 0.15
PHACTR4-204ENST00000493669 MYOM3Q5VTT5 1437 aa15.99■□□□□ 0.15
PHACTR4-204ENST00000493669 SETD5Q9C0A6 1442 aa15.99■□□□□ 0.15
PHACTR4-204ENST00000493669 FAM50AQ14320 339 aaKnown RBP15.97■□□□□ 0.15
PHACTR4-204ENST00000493669 RAB3GAP2Q9H2M9 1393 aa15.96■□□□□ 0.15
PHACTR4-204ENST00000493669 MAGI3Q5TCQ9 1506 aa15.96■□□□□ 0.15
PHACTR4-204ENST00000493669 RAPGEF6Q8TEU7 1601 aa15.95■□□□□ 0.14
PHACTR4-204ENST00000493669 ITGAEP38570 1179 aa15.94■□□□□ 0.14
PHACTR4-204ENST00000493669 CARMIL2Q6F5E8 1435 aa15.93■□□□□ 0.14
PHACTR4-204ENST00000493669 CDK13Q14004 1512 aaKnown RBP15.91■□□□□ 0.14
PHACTR4-204ENST00000493669 TCOF1Q13428 1488 aaKnown RBP15.91■□□□□ 0.14
PHACTR4-204ENST00000493669 NUP153P49790 1475 aaKnown RBP15.91■□□□□ 0.14
PHACTR4-204ENST00000493669 PTPN23Q9H3S7 1636 aa15.9■□□□□ 0.14
PHACTR4-204ENST00000493669 MIA2Q96PC5 1412 aa15.89■□□□□ 0.13
PHACTR4-204ENST00000493669 FBLN2P98095 1184 aa15.88■□□□□ 0.13
PHACTR4-204ENST00000493669 ZNF316A6NFI3 1004 aaPredicted RBP15.87■□□□□ 0.13
PHACTR4-204ENST00000493669 JPH4Q96JJ6 628 aa15.87■□□□□ 0.13
PHACTR4-204ENST00000493669 HFM1A2PYH4 1435 aa15.86■□□□□ 0.13
PHACTR4-204ENST00000493669 MAPKBP1O60336 1514 aa15.85■□□□□ 0.13
PHACTR4-204ENST00000493669 CDK11AQ9UQ88 783 aaPredicted RBP15.85■□□□□ 0.13
PHACTR4-204ENST00000493669 AKNAQ7Z591 1439 aa15.82■□□□□ 0.12
PHACTR4-204ENST00000493669 PTPRKQ15262 1439 aa15.82■□□□□ 0.12
PHACTR4-204ENST00000493669 ABCA8O94911 1581 aa15.81■□□□□ 0.12
PHACTR4-204ENST00000493669 TROQ12816 1431 aaPredicted RBP15.8■□□□□ 0.12
PHACTR4-204ENST00000493669 PLB1Q6P1J6 1458 aa15.8■□□□□ 0.12
PHACTR4-204ENST00000493669 ADCY10Q96PN6 1610 aa15.8■□□□□ 0.12
PHACTR4-204ENST00000493669 DIEXFQ68CQ4 756 aaKnown RBP15.8■□□□□ 0.12
PHACTR4-204ENST00000493669 CHD1O14646 1710 aa15.8■□□□□ 0.12
PHACTR4-204ENST00000493669 NAIPQ13075 1403 aa15.78■□□□□ 0.12
PHACTR4-204ENST00000493669 GCC2Q8IWJ2 1684 aa15.77■□□□□ 0.11
PHACTR4-204ENST00000493669 SHROOM2Q13796 1616 aa15.76■□□□□ 0.11
PHACTR4-204ENST00000493669 UACAQ9BZF9 1416 aa15.76■□□□□ 0.11
PHACTR4-204ENST00000493669 ITSN2Q9NZM3 1697 aa15.75■□□□□ 0.11
PHACTR4-204ENST00000493669 TIMELESSQ9UNS1 1208 aa15.75■□□□□ 0.11
PHACTR4-204ENST00000493669 PRG4Q92954 1404 aaPredicted RBP15.74■□□□□ 0.11
PHACTR4-204ENST00000493669 ACIN1Q9UKV3 1341 aaKnown RBP15.74■□□□□ 0.11
PHACTR4-204ENST00000493669 DNMT1P26358 1616 aaKnown RBP15.72■□□□□ 0.11
PHACTR4-204ENST00000493669 ARID3CA6NKF2 412 aa15.72■□□□□ 0.11
PHACTR4-204ENST00000493669 ROCK1Q13464 1354 aa15.71■□□□□ 0.11
PHACTR4-204ENST00000493669 PTPRGP23470 1445 aa15.7■□□□□ 0.1
PHACTR4-204ENST00000493669 DAPK1P53355 1430 aa15.69■□□□□ 0.1
PHACTR4-204ENST00000493669 ATP10BO94823 1461 aa15.69■□□□□ 0.1
PHACTR4-204ENST00000493669 KIF14Q15058 1648 aa15.68■□□□□ 0.1
PHACTR4-204ENST00000493669 GPATCH8Q9UKJ3 1502 aaKnown RBP15.67■□□□□ 0.1
PHACTR4-204ENST00000493669 ABCC5O15440 1437 aa15.66■□□□□ 0.1
PHACTR4-204ENST00000493669 PLEKHD1A6NEE1 506 aa15.65■□□□□ 0.1
PHACTR4-204ENST00000493669 CAMSAP2Q08AD1 1489 aa15.65■□□□□ 0.1
PHACTR4-204ENST00000493669 CLASP1Q7Z460 1538 aa15.64■□□□□ 0.1
PHACTR4-204ENST00000493669 ABCC10Q5T3U5 1492 aa15.64■□□□□ 0.09
PHACTR4-204ENST00000493669 CFDP1Q9UEE9 299 aaPredicted RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms