RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 UBTFP17480 764 aaKnown RBP11.39□□□□□ -0.59
SMARCE1-211ENST00000493660 SNAPC4Q5SXM2 1469 aa11.38□□□□□ -0.59
SMARCE1-211ENST00000493660 CEP162Q5TB80 1403 aa11.38□□□□□ -0.59
SMARCE1-211ENST00000493660 EHMT2Q96KQ7 1210 aa11.36□□□□□ -0.59
SMARCE1-211ENST00000493660 SYNJ2O15056 1496 aa11.35□□□□□ -0.59
SMARCE1-211ENST00000493660 GRIN2AQ12879 1464 aa11.33□□□□□ -0.6
SMARCE1-211ENST00000493660 CLIP1P30622 1438 aa11.32□□□□□ -0.6
SMARCE1-211ENST00000493660 FOXD1Q16676 465 aa11.32□□□□□ -0.6
SMARCE1-211ENST00000493660 EFCAB5A4FU69 1503 aa11.3□□□□□ -0.6
SMARCE1-211ENST00000493660 CHD1O14646 1710 aa11.29□□□□□ -0.6
SMARCE1-211ENST00000493660 IQGAP2Q13576 1575 aa11.29□□□□□ -0.6
SMARCE1-211ENST00000493660 SCAF1Q9H7N4 1312 aaKnown RBP11.28□□□□□ -0.6
SMARCE1-211ENST00000493660 SAMD9Q5K651 1589 aa11.27□□□□□ -0.61
SMARCE1-211ENST00000493660 NUP160Q12769 1436 aa11.26□□□□□ -0.61
SMARCE1-211ENST00000493660 CEP170Q5SW79 1584 aa11.26□□□□□ -0.61
SMARCE1-211ENST00000493660 KIAA0586Q9BVV6 1533 aa11.26□□□□□ -0.61
SMARCE1-211ENST00000493660 ARHGAP35Q9NRY4 1499 aa11.26□□□□□ -0.61
SMARCE1-211ENST00000493660 ARAP1Q96P48 1450 aa11.24□□□□□ -0.61
SMARCE1-211ENST00000493660 PRKCSHP14314 528 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-211ENST00000493660 UGGT2Q9NYU1 1516 aa11.24□□□□□ -0.61
SMARCE1-211ENST00000493660 CHMP7Q8WUX9 453 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-211ENST00000493660 VPS8Q8N3P4 1428 aa11.23□□□□□ -0.61
SMARCE1-211ENST00000493660 MSH5O43196 834 aa11.2□□□□□ -0.62
SMARCE1-211ENST00000493660 ERICH6Q7L0X2 663 aa11.19□□□□□ -0.62
SMARCE1-211ENST00000493660 KIAA0556O60303 1618 aa11.18□□□□□ -0.62
SMARCE1-211ENST00000493660 SHROOM2Q13796 1616 aa11.17□□□□□ -0.62
SMARCE1-211ENST00000493660 FBLN2P98095 1184 aa11.16□□□□□ -0.62
SMARCE1-211ENST00000493660 CLASP1Q7Z460 1538 aa11.16□□□□□ -0.62
SMARCE1-211ENST00000493660 FMN1Q68DA7 1419 aa11.15□□□□□ -0.62
SMARCE1-211ENST00000493660 RANGAP1P46060 587 aaPredicted RBP11.15□□□□□ -0.62
SMARCE1-211ENST00000493660 DISP1Q96F81 1524 aa11.14□□□□□ -0.63
SMARCE1-211ENST00000493660 FHOD3Q2V2M9 1422 aa11.14□□□□□ -0.63
SMARCE1-211ENST00000493660 PCF11O94913 1555 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-211ENST00000493660 MAP3K1Q13233 1512 aa11.13□□□□□ -0.63
SMARCE1-211ENST00000493660 FYCO1Q9BQS8 1478 aa11.13□□□□□ -0.63
SMARCE1-211ENST00000493660 DNAJC5Q9H3Z4 198 aa11.12□□□□□ -0.63
SMARCE1-211ENST00000493660 CFAP43Q8NDM7 1665 aa11.12□□□□□ -0.63
SMARCE1-211ENST00000493660 CARMIL2Q6F5E8 1435 aa11.12□□□□□ -0.63
SMARCE1-211ENST00000493660 CASKIN1Q8WXD9 1431 aa11.11□□□□□ -0.63
SMARCE1-211ENST00000493660 BCL11AQ9H165 835 aa11.1□□□□□ -0.63
SMARCE1-211ENST00000493660 PPARGC1BQ86YN6 1023 aaKnown RBP11.09□□□□□ -0.63
SMARCE1-211ENST00000493660 JPH4Q96JJ6 628 aa11.09□□□□□ -0.63
SMARCE1-211ENST00000493660 HECW1Q76N89 1606 aa11.09□□□□□ -0.63
SMARCE1-211ENST00000493660 APLP2Q06481 763 aa11.08□□□□□ -0.64
SMARCE1-211ENST00000493660 TIAM1Q13009 1591 aa11.08□□□□□ -0.64
SMARCE1-211ENST00000493660 LRRIQ1Q96JM4 1722 aa11.06□□□□□ -0.64
SMARCE1-211ENST00000493660 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
SMARCE1-211ENST00000493660 RAPGEF6Q8TEU7 1601 aa11.06□□□□□ -0.64
SMARCE1-211ENST00000493660 PRG4Q92954 1404 aaPredicted RBP11.06□□□□□ -0.64
SMARCE1-211ENST00000493660 CCDC18Q5T9S5 1454 aa11.05□□□□□ -0.64
SMARCE1-211ENST00000493660 ABCA8O94911 1581 aa11.02□□□□□ -0.64
SMARCE1-211ENST00000493660 LRRC9Q6ZRR7 1453 aa11□□□□□ -0.65
SMARCE1-211ENST00000493660 OSCARQ8IYS5 282 aa11□□□□□ -0.65
SMARCE1-211ENST00000493660 ERCC6L2Q5T890 1561 aa10.99□□□□□ -0.65
SMARCE1-211ENST00000493660 EPRSP07814 1512 aaKnown RBP10.99□□□□□ -0.65
SMARCE1-211ENST00000493660 TRIM26Q12899 539 aaPredicted RBP10.98□□□□□ -0.65
SMARCE1-211ENST00000493660 EHBP1L1Q8N3D4 1523 aa10.98□□□□□ -0.65
SMARCE1-211ENST00000493660 NUP153P49790 1475 aaKnown RBP10.98□□□□□ -0.65
SMARCE1-211ENST00000493660 PTPRGP23470 1445 aa10.98□□□□□ -0.65
SMARCE1-211ENST00000493660 PLB1Q6P1J6 1458 aa10.96□□□□□ -0.65
SMARCE1-211ENST00000493660 SUPT6HQ7KZ85 1726 aaKnown RBP10.95□□□□□ -0.66
SMARCE1-211ENST00000493660 ABCC2Q92887 1545 aa10.95□□□□□ -0.66
SMARCE1-211ENST00000493660 UHRF1BP1LA0JNW5 1464 aa10.94□□□□□ -0.66
SMARCE1-211ENST00000493660 CENPBP07199 599 aaPredicted RBP10.94□□□□□ -0.66
SMARCE1-211ENST00000493660 UACAQ9BZF9 1416 aa10.94□□□□□ -0.66
SMARCE1-211ENST00000493660 CDK13Q14004 1512 aaKnown RBP10.94□□□□□ -0.66
SMARCE1-211ENST00000493660 KANK4Q5T7N3 995 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-211ENST00000493660 ATP1B4Q9UN42 357 aaPredicted RBP10.93□□□□□ -0.66
SMARCE1-211ENST00000493660 ADCY10Q96PN6 1610 aa10.92□□□□□ -0.66
SMARCE1-211ENST00000493660 MTUS2Q5JR59 1369 aa10.91□□□□□ -0.66
SMARCE1-211ENST00000493660 MAGI3Q5TCQ9 1506 aa10.91□□□□□ -0.66
SMARCE1-211ENST00000493660 ARHGEF11O15085 1522 aa10.9□□□□□ -0.66
SMARCE1-211ENST00000493660 RRBP1Q9P2E9 1410 aaKnown RBP10.89□□□□□ -0.67
SMARCE1-211ENST00000493660 ATP10BO94823 1461 aa10.89□□□□□ -0.67
SMARCE1-211ENST00000493660 CDK11AQ9UQ88 783 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-211ENST00000493660 ZCCHC11Q5TAX3 1644 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-211ENST00000493660 ACIN1Q9UKV3 1341 aaKnown RBP10.88□□□□□ -0.67
SMARCE1-211ENST00000493660 TROQ12816 1431 aaPredicted RBP10.88□□□□□ -0.67
SMARCE1-211ENST00000493660 NCOA2Q15596 1464 aa10.87□□□□□ -0.67
SMARCE1-211ENST00000493660 KDM5BQ9UGL1 1544 aa10.87□□□□□ -0.67
SMARCE1-211ENST00000493660 PCGF6Q9BYE7 350 aa10.86□□□□□ -0.67
SMARCE1-211ENST00000493660 ITSN2Q9NZM3 1697 aa10.86□□□□□ -0.67
SMARCE1-211ENST00000493660 KIF14Q15058 1648 aa10.86□□□□□ -0.67
SMARCE1-211ENST00000493660 RIMBP3CA6NJZ7 1639 aa10.85□□□□□ -0.67
SMARCE1-211ENST00000493660 RIMBP3BA6NNM3 1639 aa10.85□□□□□ -0.67
SMARCE1-211ENST00000493660 RIMBP3Q9UFD9 1639 aa10.85□□□□□ -0.67
SMARCE1-211ENST00000493660 PHLDB1Q86UU1 1377 aa10.84□□□□□ -0.67
SMARCE1-211ENST00000493660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.84□□□□□ -0.67
SMARCE1-211ENST00000493660 SLC24A1O60721 1099 aa10.83□□□□□ -0.68
SMARCE1-211ENST00000493660 MYOM3Q5VTT5 1437 aa10.83□□□□□ -0.68
SMARCE1-211ENST00000493660 CCNB3Q8WWL7 1395 aa10.82□□□□□ -0.68
SMARCE1-211ENST00000493660 FGD6Q6ZV73 1430 aa10.81□□□□□ -0.68
SMARCE1-211ENST00000493660 MIA2Q96PC5 1412 aa10.81□□□□□ -0.68
SMARCE1-211ENST00000493660 PLEKHD1A6NEE1 506 aa10.81□□□□□ -0.68
SMARCE1-211ENST00000493660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.81□□□□□ -0.68
SMARCE1-211ENST00000493660 HNRNPUL2Q1KMD3 747 aaKnown RBP10.81□□□□□ -0.68
SMARCE1-211ENST00000493660 PTPN23Q9H3S7 1636 aa10.8□□□□□ -0.68
SMARCE1-211ENST00000493660 CDC42BPAQ5VT25 1732 aa10.8□□□□□ -0.68
SMARCE1-211ENST00000493660 ZEB1P37275 1124 aaPredicted RBP10.8□□□□□ -0.68
SMARCE1-211ENST00000493660 TCOF1Q13428 1488 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms