RNA–Protein interactions for RNA: ENST00000493622.5

PHGDH-206, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 742 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-206ENST00000493622 SENP3Q9H4L4 574 aaPredicted RBP13.97□□□□□ -0.17
PHGDH-206ENST00000493622 CFAP43Q8NDM7 1665 aa13.97□□□□□ -0.17
PHGDH-206ENST00000493622 EIF4G3O43432 1585 aaKnown RBP13.96□□□□□ -0.18
PHGDH-206ENST00000493622 MAP3K1Q13233 1512 aa13.95□□□□□ -0.18
PHGDH-206ENST00000493622 PCF11O94913 1555 aaKnown RBP13.95□□□□□ -0.18
PHGDH-206ENST00000493622 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
PHGDH-206ENST00000493622 GRIN2BQ13224 1484 aa13.93□□□□□ -0.18
PHGDH-206ENST00000493622 TIAM1Q13009 1591 aa13.93□□□□□ -0.18
PHGDH-206ENST00000493622 FHAD1B1AJZ9 1412 aa13.93□□□□□ -0.18
PHGDH-206ENST00000493622 AQRO60306 1485 aaKnown RBP eCLIP13.93□□□□□ -0.182e-7■□□□□ 9.8
PHGDH-206ENST00000493622 ERCC6Q03468 1493 aa13.93□□□□□ -0.18
PHGDH-206ENST00000493622 RANGAP1P46060 587 aaPredicted RBP13.92□□□□□ -0.18
PHGDH-206ENST00000493622 LRRIQ1Q96JM4 1722 aa13.89□□□□□ -0.19
PHGDH-206ENST00000493622 FHOD3Q2V2M9 1422 aa13.87□□□□□ -0.19
PHGDH-206ENST00000493622 TTBK1Q5TCY1 1321 aaPredicted RBP13.87□□□□□ -0.19
PHGDH-206ENST00000493622 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
PHGDH-206ENST00000493622 FYCO1Q9BQS8 1478 aa13.87□□□□□ -0.19
PHGDH-206ENST00000493622 IQGAP2Q13576 1575 aa13.86□□□□□ -0.19
PHGDH-206ENST00000493622 CASKIN1Q8WXD9 1431 aa13.84□□□□□ -0.19
PHGDH-206ENST00000493622 KANK4Q5T7N3 995 aaPredicted RBP13.83□□□□□ -0.2
PHGDH-206ENST00000493622 RRBP1Q9P2E9 1410 aaKnown RBP13.82□□□□□ -0.2
PHGDH-206ENST00000493622 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
PHGDH-206ENST00000493622 UGGT2Q9NYU1 1516 aa13.82□□□□□ -0.2
PHGDH-206ENST00000493622 APLP2Q06481 763 aa13.82□□□□□ -0.2
PHGDH-206ENST00000493622 LRRC9Q6ZRR7 1453 aa13.81□□□□□ -0.2
PHGDH-206ENST00000493622 GRIN2AQ12879 1464 aa13.8□□□□□ -0.2
PHGDH-206ENST00000493622 FMN1Q68DA7 1419 aa13.79□□□□□ -0.2
PHGDH-206ENST00000493622 ZEB1P37275 1124 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-206ENST00000493622 CEP170Q5SW79 1584 aa13.76□□□□□ -0.21
PHGDH-206ENST00000493622 SYNJ2O15056 1496 aa13.76□□□□□ -0.21
PHGDH-206ENST00000493622 KIAA0556O60303 1618 aa13.75□□□□□ -0.21
PHGDH-206ENST00000493622 KIAA0586Q9BVV6 1533 aa13.75□□□□□ -0.21
PHGDH-206ENST00000493622 P3H3Q8IVL6 736 aa13.73□□□□□ -0.21
PHGDH-206ENST00000493622 HECW1Q76N89 1606 aa13.72□□□□□ -0.21
PHGDH-206ENST00000493622 DISP1Q96F81 1524 aa13.72□□□□□ -0.21
PHGDH-206ENST00000493622 NUP160Q12769 1436 aa13.72□□□□□ -0.21
PHGDH-206ENST00000493622 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-206ENST00000493622 PHLDB1Q86UU1 1377 aa13.69□□□□□ -0.22
PHGDH-206ENST00000493622 CCNB3Q8WWL7 1395 aa13.69□□□□□ -0.22
PHGDH-206ENST00000493622 ARHGEF11O15085 1522 aa13.67□□□□□ -0.22
PHGDH-206ENST00000493622 MAGI3Q5TCQ9 1506 aa13.67□□□□□ -0.22
PHGDH-206ENST00000493622 EHBP1L1Q8N3D4 1523 aa13.67□□□□□ -0.22
PHGDH-206ENST00000493622 CHD1O14646 1710 aa13.67□□□□□ -0.22
PHGDH-206ENST00000493622 CCDC18Q5T9S5 1454 aa13.66□□□□□ -0.22
PHGDH-206ENST00000493622 SUPT6HQ7KZ85 1726 aaKnown RBP13.65□□□□□ -0.22
PHGDH-206ENST00000493622 HNRNPUL2Q1KMD3 747 aaKnown RBP13.64□□□□□ -0.23
PHGDH-206ENST00000493622 RAPGEF6Q8TEU7 1601 aa13.63□□□□□ -0.23
PHGDH-206ENST00000493622 EPRSP07814 1512 aaKnown RBP13.63□□□□□ -0.23
PHGDH-206ENST00000493622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.61□□□□□ -0.23
PHGDH-206ENST00000493622 CCER1Q8TC90 406 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-206ENST00000493622 CDK13Q14004 1512 aaKnown RBP13.59□□□□□ -0.23
PHGDH-206ENST00000493622 NCOA2Q15596 1464 aa13.59□□□□□ -0.23
PHGDH-206ENST00000493622 SHROOM2Q13796 1616 aa13.58□□□□□ -0.24
PHGDH-206ENST00000493622 NUP153P49790 1475 aaKnown RBP13.58□□□□□ -0.24
PHGDH-206ENST00000493622 FGD6Q6ZV73 1430 aa13.57□□□□□ -0.24
PHGDH-206ENST00000493622 CHMP7Q8WUX9 453 aaPredicted RBP13.56□□□□□ -0.24
PHGDH-206ENST00000493622 MTUS2Q5JR59 1369 aa13.55□□□□□ -0.24
PHGDH-206ENST00000493622 MYOM3Q5VTT5 1437 aa13.55□□□□□ -0.24
PHGDH-206ENST00000493622 ABCA8O94911 1581 aa13.54□□□□□ -0.24
PHGDH-206ENST00000493622 DHX57Q6P158 1386 aaKnown RBP13.54□□□□□ -0.24
PHGDH-206ENST00000493622 ADCY10Q96PN6 1610 aa13.53□□□□□ -0.24
PHGDH-206ENST00000493622 PTPN23Q9H3S7 1636 aa13.53□□□□□ -0.24
PHGDH-206ENST00000493622 TCOF1Q13428 1488 aaKnown RBP13.53□□□□□ -0.24
PHGDH-206ENST00000493622 ATP1B4Q9UN42 357 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-206ENST00000493622 CARMIL2Q6F5E8 1435 aa13.49□□□□□ -0.25
PHGDH-206ENST00000493622 CLASP1Q7Z460 1538 aa13.49□□□□□ -0.25
PHGDH-206ENST00000493622 PLB1Q6P1J6 1458 aa13.48□□□□□ -0.25
PHGDH-206ENST00000493622 GCC2Q8IWJ2 1684 aa13.47□□□□□ -0.25
PHGDH-206ENST00000493622 CLSPNQ9HAW4 1339 aa13.47□□□□□ -0.25
PHGDH-206ENST00000493622 JPH4Q96JJ6 628 aa13.47□□□□□ -0.25
PHGDH-206ENST00000493622 PTPRKQ15262 1439 aa13.47□□□□□ -0.25
PHGDH-206ENST00000493622 SETD5Q9C0A6 1442 aa13.47□□□□□ -0.25
PHGDH-206ENST00000493622 RAB3GAP2Q9H2M9 1393 aa13.46□□□□□ -0.25
PHGDH-206ENST00000493622 MAPKBP1O60336 1514 aa13.46□□□□□ -0.25
PHGDH-206ENST00000493622 ITSN2Q9NZM3 1697 aa13.44□□□□□ -0.26
PHGDH-206ENST00000493622 FBLN2P98095 1184 aa13.44□□□□□ -0.26
PHGDH-206ENST00000493622 MIA2Q96PC5 1412 aa13.44□□□□□ -0.26
PHGDH-206ENST00000493622 KIF14Q15058 1648 aa13.43□□□□□ -0.26
PHGDH-206ENST00000493622 TROQ12816 1431 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-206ENST00000493622 PRG4Q92954 1404 aaPredicted RBP13.42□□□□□ -0.26
PHGDH-206ENST00000493622 FAM50AQ14320 339 aaKnown RBP13.42□□□□□ -0.26
PHGDH-206ENST00000493622 ERCC6L2Q5T890 1561 aa13.41□□□□□ -0.26
PHGDH-206ENST00000493622 HFM1A2PYH4 1435 aa13.41□□□□□ -0.26
PHGDH-206ENST00000493622 DNMT1P26358 1616 aaKnown RBP13.41□□□□□ -0.26
PHGDH-206ENST00000493622 CDC42BPAQ5VT25 1732 aa13.41□□□□□ -0.26
PHGDH-206ENST00000493622 AKNAQ7Z591 1439 aa13.4□□□□□ -0.26
PHGDH-206ENST00000493622 ITGAEP38570 1179 aa13.39□□□□□ -0.27
PHGDH-206ENST00000493622 CROCC2H7BZ55 1655 aa13.38□□□□□ -0.27
PHGDH-206ENST00000493622 ATP10BO94823 1461 aa13.38□□□□□ -0.27
PHGDH-206ENST00000493622 NAIPQ13075 1403 aa13.38□□□□□ -0.27
PHGDH-206ENST00000493622 ABCC10Q5T3U5 1492 aa13.37□□□□□ -0.27
PHGDH-206ENST00000493622 ADGBQ8N7X0 1667 aa13.35□□□□□ -0.27
PHGDH-206ENST00000493622 GPATCH8Q9UKJ3 1502 aaKnown RBP13.34□□□□□ -0.27
PHGDH-206ENST00000493622 KDM6BO15054 1643 aa13.34□□□□□ -0.27
PHGDH-206ENST00000493622 PTPRGP23470 1445 aa13.33□□□□□ -0.28
PHGDH-206ENST00000493622 ARID3CA6NKF2 412 aa13.33□□□□□ -0.28
PHGDH-206ENST00000493622 ABCC2Q92887 1545 aa13.33□□□□□ -0.28
PHGDH-206ENST00000493622 CAMSAP2Q08AD1 1489 aa13.32□□□□□ -0.28
PHGDH-206ENST00000493622 DAPK1P53355 1430 aa13.31□□□□□ -0.28
PHGDH-206ENST00000493622 CDC42BPBQ9Y5S2 1711 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms