RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 KIAA0586Q9BVV6 1533 aa15.39■□□□□ 0.05
TM4SF1-203ENST00000493298 PRG4Q92954 1404 aaPredicted RBP15.36■□□□□ 0.05
TM4SF1-203ENST00000493298 CARMIL1Q5VZK9 1371 aa15.36■□□□□ 0.05
TM4SF1-203ENST00000493298 JPH4Q96JJ6 628 aa15.34■□□□□ 0.05
TM4SF1-203ENST00000493298 ADCY10Q96PN6 1610 aa15.31■□□□□ 0.04
TM4SF1-203ENST00000493298 KIF13AQ9H1H9 1805 aa15.31■□□□□ 0.04
TM4SF1-203ENST00000493298 IQGAP2Q13576 1575 aa15.3■□□□□ 0.04
TM4SF1-203ENST00000493298 CTTNBP2Q8WZ74 1663 aa15.28■□□□□ 0.04
TM4SF1-203ENST00000493298 PRXQ9BXM0 1461 aa15.27■□□□□ 0.04
TM4SF1-203ENST00000493298 RAPGEF2Q9Y4G8 1499 aa15.27■□□□□ 0.04
TM4SF1-203ENST00000493298 DISP1Q96F81 1524 aa15.27■□□□□ 0.03
TM4SF1-203ENST00000493298 UGGT2Q9NYU1 1516 aa15.24■□□□□ 0.03
TM4SF1-203ENST00000493298 MAPKBP1O60336 1514 aa15.2■□□□□ 0.02
TM4SF1-203ENST00000493298 KIAA0556O60303 1618 aa15.19■□□□□ 0.02
TM4SF1-203ENST00000493298 DIP2BQ9P265 1576 aa15.15■□□□□ 0.02
TM4SF1-203ENST00000493298 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
TM4SF1-203ENST00000493298 UHRF1BP1LA0JNW5 1464 aa15.13■□□□□ 0.01
TM4SF1-203ENST00000493298 TNIKQ9UKE5 1360 aa15.12■□□□□ 0.01
TM4SF1-203ENST00000493298 PTPRGP23470 1445 aa15.11■□□□□ 0.01
TM4SF1-203ENST00000493298 ABCC10Q5T3U5 1492 aa15.11■□□□□ 0.01
TM4SF1-203ENST00000493298 CARMIL2Q6F5E8 1435 aa15.1■□□□□ 0.01
TM4SF1-203ENST00000493298 FAM9AQ8IZU1 332 aaPredicted RBP15.1■□□□□ 0.01
TM4SF1-203ENST00000493298 ABCC2Q92887 1545 aa15.1■□□□□ 0.01
TM4SF1-203ENST00000493298 SAMD9Q5K651 1589 aa15.08■□□□□ 0
TM4SF1-203ENST00000493298 KDM5BQ9UGL1 1544 aa15.07■□□□□ 0
TM4SF1-203ENST00000493298 PPRC1Q5VV67 1664 aaKnown RBP15.07■□□□□ 0
TM4SF1-203ENST00000493298 ABCA8O94911 1581 aa15.07■□□□□ 0
TM4SF1-203ENST00000493298 ZCCHC11Q5TAX3 1644 aaKnown RBP15.06■□□□□ 0
TM4SF1-203ENST00000493298 EEA1Q15075 1411 aa15.06■□□□□ 0
TM4SF1-203ENST00000493298 KIF21BO75037 1637 aa15.06■□□□□ 0
TM4SF1-203ENST00000493298 LOC105371045A0A1W2PR82 267 aa15.05■□□□□ -0
TM4SF1-203ENST00000493298 UACAQ9BZF9 1416 aa15.05■□□□□ -0
TM4SF1-203ENST00000493298 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
TM4SF1-203ENST00000493298 PLB1Q6P1J6 1458 aa15.02■□□□□ -0
TM4SF1-203ENST00000493298 TSPOAP1O95153 1857 aa15.01□□□□□ -0.01
TM4SF1-203ENST00000493298 GLI2P10070 1586 aa15.01□□□□□ -0.01
TM4SF1-203ENST00000493298 GOLGA3Q08378 1498 aa15□□□□□ -0.01
TM4SF1-203ENST00000493298 ASXL2Q76L83 1435 aa14.99□□□□□ -0.01
TM4SF1-203ENST00000493298 MAP3K4Q9Y6R4 1608 aa14.99□□□□□ -0.01
TM4SF1-203ENST00000493298 EPRSP07814 1512 aaKnown RBP14.94□□□□□ -0.02
TM4SF1-203ENST00000493298 FAM69CQ0P6D2 419 aa14.93□□□□□ -0.02
TM4SF1-203ENST00000493298 TTBK1Q5TCY1 1321 aaPredicted RBP14.92□□□□□ -0.02
TM4SF1-203ENST00000493298 NPM1P06748 294 aaKnown RBP eCLIP14.9□□□□□ -0.02
TM4SF1-203ENST00000493298 RAPGEF6Q8TEU7 1601 aa14.9□□□□□ -0.02
TM4SF1-203ENST00000493298 WDR7Q9Y4E6 1490 aa14.89□□□□□ -0.03
TM4SF1-203ENST00000493298 ATP10BO94823 1461 aa14.88□□□□□ -0.03
TM4SF1-203ENST00000493298 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
TM4SF1-203ENST00000493298 KDM6BO15054 1643 aa14.87□□□□□ -0.03
TM4SF1-203ENST00000493298 NUP153P49790 1475 aaKnown RBP14.87□□□□□ -0.03
TM4SF1-203ENST00000493298 CFAP43Q8NDM7 1665 aa14.87□□□□□ -0.03
TM4SF1-203ENST00000493298 EFCAB5A4FU69 1503 aa14.87□□□□□ -0.03
TM4SF1-203ENST00000493298 COL17A1Q9UMD9 1497 aaPredicted RBP14.86□□□□□ -0.03
TM4SF1-203ENST00000493298 FHOD3Q2V2M9 1422 aa14.84□□□□□ -0.03
TM4SF1-203ENST00000493298 LRRIQ1Q96JM4 1722 aa14.83□□□□□ -0.03
TM4SF1-203ENST00000493298 P3H3Q8IVL6 736 aa14.82□□□□□ -0.04
TM4SF1-203ENST00000493298 ABCA9Q8IUA7 1624 aa14.81□□□□□ -0.04
TM4SF1-203ENST00000493298 ARHGAP35Q9NRY4 1499 aa14.81□□□□□ -0.04
TM4SF1-203ENST00000493298 MAGI3Q5TCQ9 1506 aa14.79□□□□□ -0.04
TM4SF1-203ENST00000493298 TEX14Q8IWB6 1497 aa14.73□□□□□ -0.05
TM4SF1-203ENST00000493298 CD109Q6YHK3 1445 aa14.72□□□□□ -0.05
TM4SF1-203ENST00000493298 CDK13Q14004 1512 aaKnown RBP14.71□□□□□ -0.05
TM4SF1-203ENST00000493298 TTC37Q6PGP7 1564 aa14.7□□□□□ -0.06
TM4SF1-203ENST00000493298 ARID3CA6NKF2 412 aa14.7□□□□□ -0.06
TM4SF1-203ENST00000493298 UBTFP17480 764 aaKnown RBP14.69□□□□□ -0.06
TM4SF1-203ENST00000493298 ARAP3Q8WWN8 1544 aa14.69□□□□□ -0.06
TM4SF1-203ENST00000493298 FRMPD1Q5SYB0 1578 aa14.68□□□□□ -0.06
TM4SF1-203ENST00000493298 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.68□□□□□ -0.06
TM4SF1-203ENST00000493298 RANGAP1P46060 587 aaPredicted RBP14.68□□□□□ -0.06
TM4SF1-203ENST00000493298 HECW1Q76N89 1606 aa14.67□□□□□ -0.06
TM4SF1-203ENST00000493298 CEP162Q5TB80 1403 aa14.66□□□□□ -0.06
TM4SF1-203ENST00000493298 PCF11O94913 1555 aaKnown RBP14.66□□□□□ -0.06
TM4SF1-203ENST00000493298 KCNH8Q96L42 1107 aa14.66□□□□□ -0.06
TM4SF1-203ENST00000493298 FMN1Q68DA7 1419 aa14.65□□□□□ -0.06
TM4SF1-203ENST00000493298 RICTORQ6R327 1708 aa14.64□□□□□ -0.07
TM4SF1-203ENST00000493298 KIF14Q15058 1648 aa14.63□□□□□ -0.07
TM4SF1-203ENST00000493298 KDM4FA0A1W2PPD8 638 aa14.62□□□□□ -0.07
TM4SF1-203ENST00000493298 NEO1Q92859 1461 aa14.61□□□□□ -0.07
TM4SF1-203ENST00000493298 CLIP1P30622 1438 aa14.58□□□□□ -0.07
TM4SF1-203ENST00000493298 CASKIN1Q8WXD9 1431 aa14.58□□□□□ -0.07
TM4SF1-203ENST00000493298 SIGLEC1Q9BZZ2 1709 aa14.58□□□□□ -0.07
TM4SF1-203ENST00000493298 MYO5CQ9NQX4 1742 aa14.58□□□□□ -0.07
TM4SF1-203ENST00000493298 CDC42BPBQ9Y5S2 1711 aa14.58□□□□□ -0.08
TM4SF1-203ENST00000493298 CFAP74Q9C0B2 1584 aa14.56□□□□□ -0.08
TM4SF1-203ENST00000493298 PHLDB1Q86UU1 1377 aa14.55□□□□□ -0.08
TM4SF1-203ENST00000493298 ADGRL1O94910 1474 aa14.55□□□□□ -0.08
TM4SF1-203ENST00000493298 FYCO1Q9BQS8 1478 aa14.55□□□□□ -0.08
TM4SF1-203ENST00000493298 CDC42BPAQ5VT25 1732 aa14.54□□□□□ -0.08
TM4SF1-203ENST00000493298 ZMYM4Q5VZL5 1548 aa14.53□□□□□ -0.08
TM4SF1-203ENST00000493298 FANCAO15360 1455 aa14.53□□□□□ -0.08
TM4SF1-203ENST00000493298 TROQ12816 1431 aaPredicted RBP14.53□□□□□ -0.08
TM4SF1-203ENST00000493298 PLCH2O75038 1416 aa14.52□□□□□ -0.08
TM4SF1-203ENST00000493298 PLEKHD1A6NEE1 506 aa14.52□□□□□ -0.09
TM4SF1-203ENST00000493298 PREX2Q70Z35 1606 aa14.52□□□□□ -0.09
TM4SF1-203ENST00000493298 ARHGEF40Q8TER5 1519 aa14.51□□□□□ -0.09
TM4SF1-203ENST00000493298 CCDC18Q5T9S5 1454 aa14.5□□□□□ -0.09
TM4SF1-203ENST00000493298 AKNAQ7Z591 1439 aa14.5□□□□□ -0.09
TM4SF1-203ENST00000493298 ADAMTSL3P82987 1691 aa14.5□□□□□ -0.09
TM4SF1-203ENST00000493298 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.49□□□□□ -0.09
TM4SF1-203ENST00000493298 RAPGEF3O95398 923 aa14.49□□□□□ -0.09
TM4SF1-203ENST00000493298 HNRNPUL2Q1KMD3 747 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms