RNA–Protein interactions for RNA: ENST00000493288.1

PGD-208, Transcript of phosphogluconate dehydrogenase, humanhuman

TSL 3

Gene PGD, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGD-208ENST00000493288 CEP162Q5TB80 1403 aa18.23■□□□□ 0.51
PGD-208ENST00000493288 CLIP1P30622 1438 aa18.18■□□□□ 0.5
PGD-208ENST00000493288 KIAA0586Q9BVV6 1533 aa18.12■□□□□ 0.49
PGD-208ENST00000493288 CTTNBP2Q8WZ74 1663 aa18.12■□□□□ 0.49
PGD-208ENST00000493288 NUP160Q12769 1436 aa18.11■□□□□ 0.49
PGD-208ENST00000493288 IQGAP2Q13576 1575 aa18.08■□□□□ 0.49
PGD-208ENST00000493288 CEP170Q5SW79 1584 aa18.08■□□□□ 0.48
PGD-208ENST00000493288 CHD1O14646 1710 aa18.06■□□□□ 0.48
PGD-208ENST00000493288 EFCAB5A4FU69 1503 aa18.03■□□□□ 0.48
PGD-208ENST00000493288 ARHGAP35Q9NRY4 1499 aa18.03■□□□□ 0.48
PGD-208ENST00000493288 P3H3Q8IVL6 736 aa18.03■□□□□ 0.48
PGD-208ENST00000493288 JPH4Q96JJ6 628 aa18.03■□□□□ 0.48
PGD-208ENST00000493288 UGGT2Q9NYU1 1516 aa17.99■□□□□ 0.47
PGD-208ENST00000493288 OSCARQ8IYS5 282 aa17.99■□□□□ 0.47
PGD-208ENST00000493288 ARAP1Q96P48 1450 aa17.98■□□□□ 0.47
PGD-208ENST00000493288 CARMIL2Q6F5E8 1435 aa17.97■□□□□ 0.47
PGD-208ENST00000493288 VPS8Q8N3P4 1428 aa17.97■□□□□ 0.47
PGD-208ENST00000493288 FHOD3Q2V2M9 1422 aa17.95■□□□□ 0.46
PGD-208ENST00000493288 SAMD9Q5K651 1589 aa17.94■□□□□ 0.46
PGD-208ENST00000493288 FMN1Q68DA7 1419 aa17.91■□□□□ 0.46
PGD-208ENST00000493288 APLP2Q06481 763 aa17.91■□□□□ 0.46
PGD-208ENST00000493288 CLASP1Q7Z460 1538 aa17.91■□□□□ 0.46
PGD-208ENST00000493288 PRG4Q92954 1404 aaPredicted RBP17.9■□□□□ 0.46
PGD-208ENST00000493288 DISP1Q96F81 1524 aa17.9■□□□□ 0.46
PGD-208ENST00000493288 KIAA0556O60303 1618 aa17.88■□□□□ 0.45
PGD-208ENST00000493288 TTBK1Q5TCY1 1321 aaPredicted RBP17.87■□□□□ 0.45
PGD-208ENST00000493288 ATP1B4Q9UN42 357 aaPredicted RBP17.86■□□□□ 0.45
PGD-208ENST00000493288 SHROOM2Q13796 1616 aa17.84■□□□□ 0.45
PGD-208ENST00000493288 CASKIN1Q8WXD9 1431 aa17.81■□□□□ 0.44
PGD-208ENST00000493288 PTPRGP23470 1445 aa17.8■□□□□ 0.44
PGD-208ENST00000493288 FYCO1Q9BQS8 1478 aa17.79■□□□□ 0.44
PGD-208ENST00000493288 PCF11O94913 1555 aaKnown RBP17.75■□□□□ 0.43
PGD-208ENST00000493288 PPARGC1BQ86YN6 1023 aaKnown RBP17.74■□□□□ 0.43
PGD-208ENST00000493288 ERCC6L2Q5T890 1561 aa17.72■□□□□ 0.43
PGD-208ENST00000493288 HECW1Q76N89 1606 aa17.7■□□□□ 0.42
PGD-208ENST00000493288 MAP3K1Q13233 1512 aa17.69■□□□□ 0.42
PGD-208ENST00000493288 PLB1Q6P1J6 1458 aa17.69■□□□□ 0.42
PGD-208ENST00000493288 RAPGEF6Q8TEU7 1601 aa17.69■□□□□ 0.42
PGD-208ENST00000493288 CCDC18Q5T9S5 1454 aa17.68■□□□□ 0.42
PGD-208ENST00000493288 UACAQ9BZF9 1416 aa17.67■□□□□ 0.42
PGD-208ENST00000493288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.67■□□□□ 0.42
PGD-208ENST00000493288 HNRNPUL2Q1KMD3 747 aaKnown RBP17.67■□□□□ 0.42
PGD-208ENST00000493288 ARID3CA6NKF2 412 aa17.66■□□□□ 0.42
PGD-208ENST00000493288 TIAM1Q13009 1591 aa17.66■□□□□ 0.42
PGD-208ENST00000493288 ABCA8O94911 1581 aa17.65■□□□□ 0.42
PGD-208ENST00000493288 EPRSP07814 1512 aaKnown RBP17.64■□□□□ 0.41
PGD-208ENST00000493288 KANK4Q5T7N3 995 aaPredicted RBP17.64■□□□□ 0.41
PGD-208ENST00000493288 CDK11AQ9UQ88 783 aaPredicted RBP17.64■□□□□ 0.41
PGD-208ENST00000493288 NUP153P49790 1475 aaKnown RBP17.63■□□□□ 0.41
PGD-208ENST00000493288 MTUS2Q5JR59 1369 aa17.61■□□□□ 0.41
PGD-208ENST00000493288 LRRC9Q6ZRR7 1453 aa17.6■□□□□ 0.41
PGD-208ENST00000493288 CFAP43Q8NDM7 1665 aa17.59■□□□□ 0.41
PGD-208ENST00000493288 ARHGEF11O15085 1522 aa17.59■□□□□ 0.41
PGD-208ENST00000493288 CDK13Q14004 1512 aaKnown RBP17.58■□□□□ 0.41
PGD-208ENST00000493288 ABCC2Q92887 1545 aa17.58■□□□□ 0.41
PGD-208ENST00000493288 UHRF1BP1LA0JNW5 1464 aa17.57■□□□□ 0.4
PGD-208ENST00000493288 TRIM26Q12899 539 aaPredicted RBP17.57■□□□□ 0.4
PGD-208ENST00000493288 PLEKHD1A6NEE1 506 aa17.56■□□□□ 0.4
PGD-208ENST00000493288 ATP10BO94823 1461 aa17.55■□□□□ 0.4
PGD-208ENST00000493288 NPM1P06748 294 aaKnown RBP eCLIP17.54■□□□□ 0.4
PGD-208ENST00000493288 LRRIQ1Q96JM4 1722 aa17.52■□□□□ 0.4
PGD-208ENST00000493288 EHBP1L1Q8N3D4 1523 aa17.52■□□□□ 0.4
PGD-208ENST00000493288 CYB5RLQ6IPT4 315 aa17.51■□□□□ 0.39
PGD-208ENST00000493288 RIMBP3CA6NJZ7 1639 aa17.5■□□□□ 0.39
PGD-208ENST00000493288 RIMBP3BA6NNM3 1639 aa17.5■□□□□ 0.39
PGD-208ENST00000493288 RIMBP3Q9UFD9 1639 aa17.5■□□□□ 0.39
PGD-208ENST00000493288 TROQ12816 1431 aaPredicted RBP17.48■□□□□ 0.39
PGD-208ENST00000493288 KDM5BQ9UGL1 1544 aa17.47■□□□□ 0.39
PGD-208ENST00000493288 ADCY10Q96PN6 1610 aa17.47■□□□□ 0.39
PGD-208ENST00000493288 MAGI3Q5TCQ9 1506 aa17.47■□□□□ 0.39
PGD-208ENST00000493288 PCGF6Q9BYE7 350 aa17.45■□□□□ 0.38
PGD-208ENST00000493288 SUPT6HQ7KZ85 1726 aaKnown RBP17.44■□□□□ 0.38
PGD-208ENST00000493288 NCOA2Q15596 1464 aa17.44■□□□□ 0.38
PGD-208ENST00000493288 ZCCHC11Q5TAX3 1644 aaKnown RBP17.43■□□□□ 0.38
PGD-208ENST00000493288 PHLDB1Q86UU1 1377 aa17.41■□□□□ 0.38
PGD-208ENST00000493288 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
PGD-208ENST00000493288 KCNH8Q96L42 1107 aa17.39■□□□□ 0.37
PGD-208ENST00000493288 KIF14Q15058 1648 aa17.37■□□□□ 0.37
PGD-208ENST00000493288 MYOM3Q5VTT5 1437 aa17.37■□□□□ 0.37
PGD-208ENST00000493288 RRBP1Q9P2E9 1410 aaKnown RBP17.36■□□□□ 0.37
PGD-208ENST00000493288 ASXL2Q76L83 1435 aa17.35■□□□□ 0.37
PGD-208ENST00000493288 WDR7Q9Y4E6 1490 aa17.35■□□□□ 0.37
PGD-208ENST00000493288 FAM50AQ14320 339 aaKnown RBP17.34■□□□□ 0.37
PGD-208ENST00000493288 FGD6Q6ZV73 1430 aa17.33■□□□□ 0.36
PGD-208ENST00000493288 MIA2Q96PC5 1412 aa17.31■□□□□ 0.36
PGD-208ENST00000493288 DNAJC5Q9H3Z4 198 aa17.31■□□□□ 0.36
PGD-208ENST00000493288 CFDP1Q9UEE9 299 aaPredicted RBP17.31■□□□□ 0.36
PGD-208ENST00000493288 ABCC10Q5T3U5 1492 aa17.3■□□□□ 0.36
PGD-208ENST00000493288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.28■□□□□ 0.36
PGD-208ENST00000493288 GPATCH8Q9UKJ3 1502 aaKnown RBP17.28■□□□□ 0.36
PGD-208ENST00000493288 ITGAEP38570 1179 aa17.26■□□□□ 0.35
PGD-208ENST00000493288 ZNF777Q9ULD5 760 aaPredicted RBP17.26■□□□□ 0.35
PGD-208ENST00000493288 MAPKBP1O60336 1514 aa17.26■□□□□ 0.35
PGD-208ENST00000493288 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.26■□□□□ 0.35
PGD-208ENST00000493288 ITSN2Q9NZM3 1697 aa17.25■□□□□ 0.35
PGD-208ENST00000493288 PTPN23Q9H3S7 1636 aa17.23■□□□□ 0.35
PGD-208ENST00000493288 TCOF1Q13428 1488 aaKnown RBP17.23■□□□□ 0.35
PGD-208ENST00000493288 TTC37Q6PGP7 1564 aa17.21■□□□□ 0.35
PGD-208ENST00000493288 EFCAB2Q5VUJ9 269 aa17.21■□□□□ 0.35
PGD-208ENST00000493288 PLCH2O75038 1416 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms