RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 SNAPC4Q5SXM2 1469 aa12.91□□□□□ -0.34
FDPS-218ENST00000492887 IGF1RP08069 1367 aa12.91□□□□□ -0.34
FDPS-218ENST00000492887 CHD1O14646 1710 aa12.9□□□□□ -0.34
FDPS-218ENST00000492887 TNIKQ9UKE5 1360 aa12.87□□□□□ -0.35
FDPS-218ENST00000492887 MAGI1Q96QZ7 1491 aaPredicted RBP12.86□□□□□ -0.35
FDPS-218ENST00000492887 FHAD1B1AJZ9 1412 aa12.86□□□□□ -0.35
FDPS-218ENST00000492887 RANGAP1P46060 587 aaPredicted RBP12.85□□□□□ -0.35
FDPS-218ENST00000492887 CEP162Q5TB80 1403 aa12.85□□□□□ -0.35
FDPS-218ENST00000492887 SYNJ2O15056 1496 aa12.8□□□□□ -0.36
FDPS-218ENST00000492887 FBLN2P98095 1184 aa12.8□□□□□ -0.36
FDPS-218ENST00000492887 CLIP1P30622 1438 aa12.79□□□□□ -0.36
FDPS-218ENST00000492887 GRIN2AQ12879 1464 aa12.78□□□□□ -0.36
FDPS-218ENST00000492887 CHMP7Q8WUX9 453 aaPredicted RBP12.78□□□□□ -0.36
FDPS-218ENST00000492887 IQGAP2Q13576 1575 aa12.77□□□□□ -0.37
FDPS-218ENST00000492887 CEP170Q5SW79 1584 aa12.74□□□□□ -0.37
FDPS-218ENST00000492887 EFCAB5A4FU69 1503 aa12.72□□□□□ -0.37
FDPS-218ENST00000492887 SAMD9Q5K651 1589 aa12.69□□□□□ -0.38
FDPS-218ENST00000492887 ARHGAP35Q9NRY4 1499 aa12.68□□□□□ -0.38
FDPS-218ENST00000492887 ARAP1Q96P48 1450 aa12.66□□□□□ -0.38
FDPS-218ENST00000492887 KIAA0586Q9BVV6 1533 aa12.66□□□□□ -0.38
FDPS-218ENST00000492887 KIAA0556O60303 1618 aa12.65□□□□□ -0.38
FDPS-218ENST00000492887 NUP160Q12769 1436 aa12.64□□□□□ -0.39
FDPS-218ENST00000492887 VPS8Q8N3P4 1428 aa12.64□□□□□ -0.39
FDPS-218ENST00000492887 P3H3Q8IVL6 736 aa12.64□□□□□ -0.39
FDPS-218ENST00000492887 FHOD3Q2V2M9 1422 aa12.63□□□□□ -0.39
FDPS-218ENST00000492887 UGGT2Q9NYU1 1516 aa12.62□□□□□ -0.39
FDPS-218ENST00000492887 PCF11O94913 1555 aaKnown RBP12.62□□□□□ -0.39
FDPS-218ENST00000492887 APLP2Q06481 763 aa12.59□□□□□ -0.39
FDPS-218ENST00000492887 TTBK1Q5TCY1 1321 aaPredicted RBP12.59□□□□□ -0.39
FDPS-218ENST00000492887 CFAP43Q8NDM7 1665 aa12.58□□□□□ -0.4
FDPS-218ENST00000492887 SHROOM2Q13796 1616 aa12.58□□□□□ -0.4
FDPS-218ENST00000492887 CLASP1Q7Z460 1538 aa12.57□□□□□ -0.4
FDPS-218ENST00000492887 CARMIL2Q6F5E8 1435 aa12.57□□□□□ -0.4
FDPS-218ENST00000492887 LRRIQ1Q96JM4 1722 aa12.57□□□□□ -0.4
FDPS-218ENST00000492887 HECW1Q76N89 1606 aa12.56□□□□□ -0.4
FDPS-218ENST00000492887 ATP1B4Q9UN42 357 aaPredicted RBP12.56□□□□□ -0.4
FDPS-218ENST00000492887 FMN1Q68DA7 1419 aa12.55□□□□□ -0.4
FDPS-218ENST00000492887 DISP1Q96F81 1524 aa12.54□□□□□ -0.4
FDPS-218ENST00000492887 RAPGEF6Q8TEU7 1601 aa12.54□□□□□ -0.4
FDPS-218ENST00000492887 PPARGC1BQ86YN6 1023 aaKnown RBP12.53□□□□□ -0.4
FDPS-218ENST00000492887 JPH4Q96JJ6 628 aa12.53□□□□□ -0.4
FDPS-218ENST00000492887 FYCO1Q9BQS8 1478 aa12.53□□□□□ -0.4
FDPS-218ENST00000492887 PRG4Q92954 1404 aaPredicted RBP12.51□□□□□ -0.41
FDPS-218ENST00000492887 TIAM1Q13009 1591 aa12.51□□□□□ -0.41
FDPS-218ENST00000492887 ERCC6L2Q5T890 1561 aa12.48□□□□□ -0.41
FDPS-218ENST00000492887 CASKIN1Q8WXD9 1431 aa12.48□□□□□ -0.41
FDPS-218ENST00000492887 OSCARQ8IYS5 282 aa12.46□□□□□ -0.41
FDPS-218ENST00000492887 SCAF1Q9H7N4 1312 aaKnown RBP12.45□□□□□ -0.42
FDPS-218ENST00000492887 CCDC18Q5T9S5 1454 aa12.45□□□□□ -0.42
FDPS-218ENST00000492887 SUPT6HQ7KZ85 1726 aaKnown RBP12.43□□□□□ -0.42
FDPS-218ENST00000492887 ABCA8O94911 1581 aa12.42□□□□□ -0.42
FDPS-218ENST00000492887 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
FDPS-218ENST00000492887 CDK13Q14004 1512 aaKnown RBP12.42□□□□□ -0.42
FDPS-218ENST00000492887 ARID3CA6NKF2 412 aa12.41□□□□□ -0.42
FDPS-218ENST00000492887 PLB1Q6P1J6 1458 aa12.4□□□□□ -0.42
FDPS-218ENST00000492887 PTPRGP23470 1445 aa12.4□□□□□ -0.42
FDPS-218ENST00000492887 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.42
FDPS-218ENST00000492887 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.42
FDPS-218ENST00000492887 EHBP1L1Q8N3D4 1523 aa12.4□□□□□ -0.42
FDPS-218ENST00000492887 EPRSP07814 1512 aaKnown RBP12.39□□□□□ -0.43
FDPS-218ENST00000492887 DMRT2Q9Y5R5 561 aa12.39□□□□□ -0.43
FDPS-218ENST00000492887 MTUS2Q5JR59 1369 aa12.38□□□□□ -0.43
FDPS-218ENST00000492887 LRRC9Q6ZRR7 1453 aa12.38□□□□□ -0.43
FDPS-218ENST00000492887 NUP153P49790 1475 aaKnown RBP12.37□□□□□ -0.43
FDPS-218ENST00000492887 TRIM26Q12899 539 aaPredicted RBP12.36□□□□□ -0.43
FDPS-218ENST00000492887 RIMBP3CA6NJZ7 1639 aa12.36□□□□□ -0.43
FDPS-218ENST00000492887 RIMBP3BA6NNM3 1639 aa12.36□□□□□ -0.43
FDPS-218ENST00000492887 ZCCHC11Q5TAX3 1644 aaKnown RBP12.36□□□□□ -0.43
FDPS-218ENST00000492887 RIMBP3Q9UFD9 1639 aa12.36□□□□□ -0.43
FDPS-218ENST00000492887 ABCC2Q92887 1545 aa12.36□□□□□ -0.43
FDPS-218ENST00000492887 UACAQ9BZF9 1416 aa12.35□□□□□ -0.43
FDPS-218ENST00000492887 ARHGEF11O15085 1522 aa12.33□□□□□ -0.44
FDPS-218ENST00000492887 KANK4Q5T7N3 995 aaPredicted RBP12.33□□□□□ -0.44
FDPS-218ENST00000492887 PCGF6Q9BYE7 350 aa12.33□□□□□ -0.44
FDPS-218ENST00000492887 ADCY10Q96PN6 1610 aa12.33□□□□□ -0.44
FDPS-218ENST00000492887 ITSN2Q9NZM3 1697 aa12.32□□□□□ -0.44
FDPS-218ENST00000492887 KIF14Q15058 1648 aa12.32□□□□□ -0.44
FDPS-218ENST00000492887 MAGI3Q5TCQ9 1506 aa12.32□□□□□ -0.44
FDPS-218ENST00000492887 CDK11AQ9UQ88 783 aaPredicted RBP12.3□□□□□ -0.44
FDPS-218ENST00000492887 MAPK8IP2Q13387 824 aaPredicted RBP12.28□□□□□ -0.44
FDPS-218ENST00000492887 NCOA2Q15596 1464 aa12.27□□□□□ -0.44
FDPS-218ENST00000492887 CDC42BPAQ5VT25 1732 aa12.27□□□□□ -0.45
FDPS-218ENST00000492887 MYO5CQ9NQX4 1742 aa12.27□□□□□ -0.45
FDPS-218ENST00000492887 UHRF1BP1LA0JNW5 1464 aa12.27□□□□□ -0.45
FDPS-218ENST00000492887 ATP10BO94823 1461 aa12.27□□□□□ -0.45
FDPS-218ENST00000492887 TROQ12816 1431 aaPredicted RBP12.26□□□□□ -0.45
FDPS-218ENST00000492887 PLEKHD1A6NEE1 506 aa12.24□□□□□ -0.45
FDPS-218ENST00000492887 PTPN23Q9H3S7 1636 aa12.24□□□□□ -0.45
FDPS-218ENST00000492887 PHLDB1Q86UU1 1377 aa12.22□□□□□ -0.45
FDPS-218ENST00000492887 KDM5BQ9UGL1 1544 aa12.21□□□□□ -0.45
FDPS-218ENST00000492887 NPM1P06748 294 aaKnown RBP eCLIP12.21□□□□□ -0.45
FDPS-218ENST00000492887 MYOM3Q5VTT5 1437 aa12.2□□□□□ -0.46
FDPS-218ENST00000492887 CCNB3Q8WWL7 1395 aa12.2□□□□□ -0.46
FDPS-218ENST00000492887 PREX2Q70Z35 1606 aa12.2□□□□□ -0.46
FDPS-218ENST00000492887 FAM50AQ14320 339 aaKnown RBP12.2□□□□□ -0.46
FDPS-218ENST00000492887 CDC42BPBQ9Y5S2 1711 aa12.2□□□□□ -0.46
FDPS-218ENST00000492887 RRBP1Q9P2E9 1410 aaKnown RBP12.2□□□□□ -0.46
FDPS-218ENST00000492887 TTC37Q6PGP7 1564 aa12.19□□□□□ -0.46
FDPS-218ENST00000492887 FGD6Q6ZV73 1430 aa12.18□□□□□ -0.46
FDPS-218ENST00000492887 ITGAEP38570 1179 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms