RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 JPH4Q96JJ6 628 aa19.65■□□□□ 0.74
SND1-215ENST00000492772 MAPKBP1O60336 1514 aa19.63■□□□□ 0.73
SND1-215ENST00000492772 ABCC10Q5T3U5 1492 aa19.6■□□□□ 0.73
SND1-215ENST00000492772 CUL7Q14999 1698 aa19.59■□□□□ 0.73
SND1-215ENST00000492772 ADCY10Q96PN6 1610 aa19.58■□□□□ 0.73
SND1-215ENST00000492772 DIP2BQ9P265 1576 aa19.58■□□□□ 0.73
SND1-215ENST00000492772 NPM1P06748 294 aaKnown RBP eCLIP19.55■□□□□ 0.72
SND1-215ENST00000492772 KIAA0586Q9BVV6 1533 aa19.55■□□□□ 0.72
SND1-215ENST00000492772 FAM69CQ0P6D2 419 aa19.52■□□□□ 0.72
SND1-215ENST00000492772 KIF27Q86VH2 1401 aa19.51■□□□□ 0.71
SND1-215ENST00000492772 KDM6BO15054 1643 aa19.47■□□□□ 0.71
SND1-215ENST00000492772 IGF1RP08069 1367 aa19.47■□□□□ 0.71
SND1-215ENST00000492772 TSPOAP1O95153 1857 aa19.41■□□□□ 0.7
SND1-215ENST00000492772 PTPRGP23470 1445 aa19.38■□□□□ 0.69
SND1-215ENST00000492772 IQGAP2Q13576 1575 aa19.37■□□□□ 0.69
SND1-215ENST00000492772 CARMIL2Q6F5E8 1435 aa19.37■□□□□ 0.69
SND1-215ENST00000492772 ABCC2Q92887 1545 aa19.36■□□□□ 0.69
SND1-215ENST00000492772 CARMIL1Q5VZK9 1371 aa19.35■□□□□ 0.69
SND1-215ENST00000492772 TNIKQ9UKE5 1360 aa19.35■□□□□ 0.69
SND1-215ENST00000492772 GLI2P10070 1586 aa19.32■□□□□ 0.68
SND1-215ENST00000492772 PLB1Q6P1J6 1458 aa19.31■□□□□ 0.68
SND1-215ENST00000492772 UHRF1BP1LA0JNW5 1464 aa19.3■□□□□ 0.68
SND1-215ENST00000492772 PPRC1Q5VV67 1664 aaKnown RBP19.29■□□□□ 0.68
SND1-215ENST00000492772 ASXL2Q76L83 1435 aa19.28■□□□□ 0.68
SND1-215ENST00000492772 TTBK1Q5TCY1 1321 aaPredicted RBP19.25■□□□□ 0.67
SND1-215ENST00000492772 KDM4FA0A1W2PPD8 638 aa19.25■□□□□ 0.67
SND1-215ENST00000492772 DISP1Q96F81 1524 aa19.25■□□□□ 0.67
SND1-215ENST00000492772 UACAQ9BZF9 1416 aa19.25■□□□□ 0.67
SND1-215ENST00000492772 UGGT2Q9NYU1 1516 aa19.22■□□□□ 0.67
SND1-215ENST00000492772 MAP3K4Q9Y6R4 1608 aa19.21■□□□□ 0.67
SND1-215ENST00000492772 KDM5BQ9UGL1 1544 aa19.2■□□□□ 0.66
SND1-215ENST00000492772 KIAA0556O60303 1618 aa19.2■□□□□ 0.66
SND1-215ENST00000492772 RAPGEF2Q9Y4G8 1499 aa19.2■□□□□ 0.66
SND1-215ENST00000492772 ZCCHC11Q5TAX3 1644 aaKnown RBP19.19■□□□□ 0.66
SND1-215ENST00000492772 EPRSP07814 1512 aaKnown RBP19.18■□□□□ 0.66
SND1-215ENST00000492772 TEX14Q8IWB6 1497 aa19.17■□□□□ 0.66
SND1-215ENST00000492772 ADGRL1O94910 1474 aa19.14■□□□□ 0.65
SND1-215ENST00000492772 CTTNBP2Q8WZ74 1663 aa19.14■□□□□ 0.65
SND1-215ENST00000492772 WDR7Q9Y4E6 1490 aa19.09■□□□□ 0.65
SND1-215ENST00000492772 COL17A1Q9UMD9 1497 aaPredicted RBP19.09■□□□□ 0.65
SND1-215ENST00000492772 GOLGA3Q08378 1498 aa19.06■□□□□ 0.64
SND1-215ENST00000492772 CFAP43Q8NDM7 1665 aa19.05■□□□□ 0.64
SND1-215ENST00000492772 ABCA8O94911 1581 aa19.02■□□□□ 0.63
SND1-215ENST00000492772 MAGI3Q5TCQ9 1506 aa19■□□□□ 0.63
SND1-215ENST00000492772 HECW2Q9P2P5 1572 aa18.97■□□□□ 0.63
SND1-215ENST00000492772 CD109Q6YHK3 1445 aa18.96■□□□□ 0.63
SND1-215ENST00000492772 PRXQ9BXM0 1461 aa18.93■□□□□ 0.62
SND1-215ENST00000492772 ILDR1Q86SU0 546 aaPredicted RBP18.91■□□□□ 0.62
SND1-215ENST00000492772 KIF21BO75037 1637 aa18.88■□□□□ 0.61
SND1-215ENST00000492772 KCNH8Q96L42 1107 aa18.87■□□□□ 0.61
SND1-215ENST00000492772 ARAP3Q8WWN8 1544 aa18.85■□□□□ 0.61
SND1-215ENST00000492772 FAM9AQ8IZU1 332 aaPredicted RBP18.84■□□□□ 0.61
SND1-215ENST00000492772 ABCA9Q8IUA7 1624 aa18.84■□□□□ 0.61
SND1-215ENST00000492772 SAMD9Q5K651 1589 aa18.81■□□□□ 0.6
SND1-215ENST00000492772 ATP10BO94823 1461 aa18.8■□□□□ 0.6
SND1-215ENST00000492772 PHLDB1Q86UU1 1377 aa18.8■□□□□ 0.6
SND1-215ENST00000492772 RAPGEF6Q8TEU7 1601 aa18.78■□□□□ 0.6
SND1-215ENST00000492772 NEO1Q92859 1461 aa18.75■□□□□ 0.59
SND1-215ENST00000492772 ADAMTSL3P82987 1691 aa18.73■□□□□ 0.59
SND1-215ENST00000492772 ARID3CA6NKF2 412 aa18.73■□□□□ 0.59
SND1-215ENST00000492772 P3H3Q8IVL6 736 aa18.72■□□□□ 0.59
SND1-215ENST00000492772 FRMPD1Q5SYB0 1578 aa18.7■□□□□ 0.58
SND1-215ENST00000492772 PTPRMP28827 1452 aa18.69■□□□□ 0.58
SND1-215ENST00000492772 NUP153P49790 1475 aaKnown RBP18.68■□□□□ 0.58
SND1-215ENST00000492772 BCORL1Q5H9F3 1711 aa18.68■□□□□ 0.58
SND1-215ENST00000492772 ARHGEF40Q8TER5 1519 aa18.66■□□□□ 0.58
SND1-215ENST00000492772 CSRNP3Q8WYN3 585 aa18.66■□□□□ 0.58
SND1-215ENST00000492772 CFAP74Q9C0B2 1584 aa18.66■□□□□ 0.58
SND1-215ENST00000492772 EEA1Q15075 1411 aa18.65■□□□□ 0.58
SND1-215ENST00000492772 MADDQ8WXG6 1647 aa18.64■□□□□ 0.57
SND1-215ENST00000492772 RAPGEF3O95398 923 aa18.64■□□□□ 0.57
SND1-215ENST00000492772 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.63■□□□□ 0.57
SND1-215ENST00000492772 HNRNPUL2Q1KMD3 747 aaKnown RBP18.63■□□□□ 0.57
SND1-215ENST00000492772 RICTORQ6R327 1708 aa18.62■□□□□ 0.57
SND1-215ENST00000492772 FHOD3Q2V2M9 1422 aa18.61■□□□□ 0.57
SND1-215ENST00000492772 PCF11O94913 1555 aaKnown RBP18.6■□□□□ 0.57
SND1-215ENST00000492772 EFCAB5A4FU69 1503 aa18.59■□□□□ 0.57
SND1-215ENST00000492772 DENND4BO75064 1496 aaPredicted RBP18.58■□□□□ 0.57
SND1-215ENST00000492772 RIMS1Q86UR5 1692 aaKnown RBP18.57■□□□□ 0.56
SND1-215ENST00000492772 ARID4BQ4LE39 1312 aaPredicted RBP18.57■□□□□ 0.56
SND1-215ENST00000492772 ZMYM4Q5VZL5 1548 aa18.57■□□□□ 0.56
SND1-215ENST00000492772 FANCAO15360 1455 aa18.57■□□□□ 0.56
SND1-215ENST00000492772 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.56■□□□□ 0.56
SND1-215ENST00000492772 TTC37Q6PGP7 1564 aa18.55■□□□□ 0.56
SND1-215ENST00000492772 PLEKHD1A6NEE1 506 aa18.55■□□□□ 0.56
SND1-215ENST00000492772 FBXO41Q8TF61 875 aa18.55■□□□□ 0.56
SND1-215ENST00000492772 AKNAQ7Z591 1439 aa18.55■□□□□ 0.56
SND1-215ENST00000492772 LMTK3Q96Q04 1460 aa18.54■□□□□ 0.56
SND1-215ENST00000492772 ZFYVE16Q7Z3T8 1539 aa18.52■□□□□ 0.56
SND1-215ENST00000492772 POGZQ7Z3K3 1410 aa18.51■□□□□ 0.55
SND1-215ENST00000492772 RANGAP1P46060 587 aaPredicted RBP18.51■□□□□ 0.55
SND1-215ENST00000492772 MAGI2Q86UL8 1455 aa18.5■□□□□ 0.55
SND1-215ENST00000492772 CDK13Q14004 1512 aaKnown RBP18.47■□□□□ 0.55
SND1-215ENST00000492772 SIGLEC1Q9BZZ2 1709 aa18.46■□□□□ 0.55
SND1-215ENST00000492772 HECW1Q76N89 1606 aa18.45■□□□□ 0.54
SND1-215ENST00000492772 FER1L4A9Z1Z3 1794 aa18.45■□□□□ 0.54
SND1-215ENST00000492772 YEATS2Q9ULM3 1422 aa18.44■□□□□ 0.54
SND1-215ENST00000492772 MYO5CQ9NQX4 1742 aa18.43■□□□□ 0.54
SND1-215ENST00000492772 PLCH2O75038 1416 aa18.41■□□□□ 0.54
SND1-215ENST00000492772 FMN1Q68DA7 1419 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms