RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 CTTNBP2Q8WZ74 1663 aa35.28■■■■□ 3.24
PSPC1-204ENST00000492741 CEP162Q5TB80 1403 aa35.27■■■■□ 3.24
PSPC1-204ENST00000492741 CEP170Q5SW79 1584 aa35.22■■■■□ 3.23
PSPC1-204ENST00000492741 NUP160Q12769 1436 aa35.22■■■■□ 3.23
PSPC1-204ENST00000492741 KIAA0586Q9BVV6 1533 aa35.19■■■■□ 3.22
PSPC1-204ENST00000492741 CLIP1P30622 1438 aa35.18■■■■□ 3.22
PSPC1-204ENST00000492741 IQGAP2Q13576 1575 aa35.15■■■■□ 3.22
PSPC1-204ENST00000492741 OSCARQ8IYS5 282 aa35.04■■■■□ 3.2
PSPC1-204ENST00000492741 JPH4Q96JJ6 628 aa35.02■■■■□ 3.2
PSPC1-204ENST00000492741 P3H3Q8IVL6 736 aa35.01■■■■□ 3.19
PSPC1-204ENST00000492741 ARHGAP35Q9NRY4 1499 aa34.98■■■■□ 3.19
PSPC1-204ENST00000492741 UGGT2Q9NYU1 1516 aa34.95■■■■□ 3.18
PSPC1-204ENST00000492741 EFCAB5A4FU69 1503 aa34.93■■■■□ 3.18
PSPC1-204ENST00000492741 CLASP1Q7Z460 1538 aa34.9■■■■□ 3.18
PSPC1-204ENST00000492741 SAMD9Q5K651 1589 aa34.86■■■■□ 3.17
PSPC1-204ENST00000492741 ARAP1Q96P48 1450 aa34.86■■■■□ 3.17
PSPC1-204ENST00000492741 FHOD3Q2V2M9 1422 aa34.85■■■■□ 3.17
PSPC1-204ENST00000492741 CARMIL2Q6F5E8 1435 aa34.84■■■■□ 3.17
PSPC1-204ENST00000492741 PRG4Q92954 1404 aaPredicted RBP34.82■■■■□ 3.16
PSPC1-204ENST00000492741 DISP1Q96F81 1524 aa34.81■■■■□ 3.16
PSPC1-204ENST00000492741 KIAA0556O60303 1618 aa34.77■■■■□ 3.16
PSPC1-204ENST00000492741 SHROOM2Q13796 1616 aa34.77■■■■□ 3.16
PSPC1-204ENST00000492741 TTBK1Q5TCY1 1321 aaPredicted RBP34.76■■■■□ 3.15
PSPC1-204ENST00000492741 VPS8Q8N3P4 1428 aa34.75■■■■□ 3.15
PSPC1-204ENST00000492741 FMN1Q68DA7 1419 aa34.68■■■■□ 3.14
PSPC1-204ENST00000492741 ATP1B4Q9UN42 357 aaPredicted RBP34.62■■■■□ 3.13
PSPC1-204ENST00000492741 ERCC6L2Q5T890 1561 aa34.6■■■■□ 3.13
PSPC1-204ENST00000492741 PTPRGP23470 1445 aa34.55■■■■□ 3.12
PSPC1-204ENST00000492741 APLP2Q06481 763 aa34.55■■■■□ 3.12
PSPC1-204ENST00000492741 CASKIN1Q8WXD9 1431 aa34.49■■■■□ 3.11
PSPC1-204ENST00000492741 PCF11O94913 1555 aaKnown RBP34.48■■■■□ 3.11
PSPC1-204ENST00000492741 FYCO1Q9BQS8 1478 aa34.46■■■■□ 3.11
PSPC1-204ENST00000492741 PLB1Q6P1J6 1458 aa34.41■■■■□ 3.1
PSPC1-204ENST00000492741 RAPGEF6Q8TEU7 1601 aa34.37■■■■□ 3.09
PSPC1-204ENST00000492741 PPARGC1BQ86YN6 1023 aaKnown RBP34.36■■■■□ 3.09
PSPC1-204ENST00000492741 ARHGEF11O15085 1522 aa34.36■■■■□ 3.09
PSPC1-204ENST00000492741 HECW1Q76N89 1606 aa34.35■■■■□ 3.09
PSPC1-204ENST00000492741 ARID3CA6NKF2 412 aa34.34■■■■□ 3.09
PSPC1-204ENST00000492741 UACAQ9BZF9 1416 aa34.32■■■■□ 3.08
PSPC1-204ENST00000492741 ABCA8O94911 1581 aa34.31■■■■□ 3.08
PSPC1-204ENST00000492741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.27■■■■□ 3.08
PSPC1-204ENST00000492741 HNRNPUL2Q1KMD3 747 aaKnown RBP34.27■■■■□ 3.08
PSPC1-204ENST00000492741 NUP153P49790 1475 aaKnown RBP34.26■■■■□ 3.08
PSPC1-204ENST00000492741 CCDC18Q5T9S5 1454 aa34.24■■■■□ 3.07
PSPC1-204ENST00000492741 EPRSP07814 1512 aaKnown RBP34.24■■■■□ 3.07
PSPC1-204ENST00000492741 RIMBP3CA6NJZ7 1639 aa34.23■■■■□ 3.07
PSPC1-204ENST00000492741 RIMBP3BA6NNM3 1639 aa34.23■■■■□ 3.07
PSPC1-204ENST00000492741 RIMBP3Q9UFD9 1639 aa34.23■■■■□ 3.07
PSPC1-204ENST00000492741 TIAM1Q13009 1591 aa34.22■■■■□ 3.07
PSPC1-204ENST00000492741 MAP3K1Q13233 1512 aa34.22■■■■□ 3.07
PSPC1-204ENST00000492741 KANK4Q5T7N3 995 aaPredicted RBP34.19■■■■□ 3.06
PSPC1-204ENST00000492741 LRRIQ1Q96JM4 1722 aa34.19■■■■□ 3.06
PSPC1-204ENST00000492741 ABCC2Q92887 1545 aa34.19■■■■□ 3.06
PSPC1-204ENST00000492741 CDK13Q14004 1512 aaKnown RBP34.18■■■■□ 3.06
PSPC1-204ENST00000492741 CYB5RLQ6IPT4 315 aa34.16■■■■□ 3.06
PSPC1-204ENST00000492741 CFAP43Q8NDM7 1665 aa34.15■■■■□ 3.06
PSPC1-204ENST00000492741 UHRF1BP1LA0JNW5 1464 aa34.14■■■■□ 3.06
PSPC1-204ENST00000492741 CDK11AQ9UQ88 783 aaPredicted RBP34.13■■■■□ 3.05
PSPC1-204ENST00000492741 ATP10BO94823 1461 aa34.11■■■■□ 3.05
PSPC1-204ENST00000492741 MTUS2Q5JR59 1369 aa34.1■■■■□ 3.05
PSPC1-204ENST00000492741 LRRC9Q6ZRR7 1453 aa34.09■■■■□ 3.05
PSPC1-204ENST00000492741 ADCY10Q96PN6 1610 aa34.06■■■■□ 3.04
PSPC1-204ENST00000492741 PLEKHD1A6NEE1 506 aa34.03■■■■□ 3.04
PSPC1-204ENST00000492741 NPM1P06748 294 aaKnown RBP eCLIP34.02■■■■□ 3.04
PSPC1-204ENST00000492741 KDM5BQ9UGL1 1544 aa33.99■■■■□ 3.03
PSPC1-204ENST00000492741 MAGI3Q5TCQ9 1506 aa33.96■■■■□ 3.03
PSPC1-204ENST00000492741 EHBP1L1Q8N3D4 1523 aa33.96■■■■□ 3.03
PSPC1-204ENST00000492741 ZCCHC11Q5TAX3 1644 aaKnown RBP33.95■■■■□ 3.03
PSPC1-204ENST00000492741 TROQ12816 1431 aaPredicted RBP33.91■■■■□ 3.02
PSPC1-204ENST00000492741 DNAJC5Q9H3Z4 198 aa33.9■■■■□ 3.02
PSPC1-204ENST00000492741 SUPT6HQ7KZ85 1726 aaKnown RBP33.84■■■■□ 3.01
PSPC1-204ENST00000492741 KCNH8Q96L42 1107 aa33.81■■■■□ 3
PSPC1-204ENST00000492741 NCOA2Q15596 1464 aa33.8■■■■□ 3
PSPC1-204ENST00000492741 TRIM26Q12899 539 aaPredicted RBP33.79■■■■□ 3
PSPC1-204ENST00000492741 PHLDB1Q86UU1 1377 aa33.75■■■□□ 2.99
PSPC1-204ENST00000492741 ASXL2Q76L83 1435 aa33.75■■■□□ 2.99
PSPC1-204ENST00000492741 KIF14Q15058 1648 aa33.73■■■□□ 2.99
PSPC1-204ENST00000492741 WDR7Q9Y4E6 1490 aa33.73■■■□□ 2.99
PSPC1-204ENST00000492741 CCNB3Q8WWL7 1395 aa33.69■■■□□ 2.98
PSPC1-204ENST00000492741 MYOM3Q5VTT5 1437 aa33.64■■■□□ 2.97
PSPC1-204ENST00000492741 PCGF6Q9BYE7 350 aa33.61■■■□□ 2.97
PSPC1-204ENST00000492741 MAPKBP1O60336 1514 aa33.6■■■□□ 2.97
PSPC1-204ENST00000492741 ABCC10Q5T3U5 1492 aa33.59■■■□□ 2.97
PSPC1-204ENST00000492741 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.57■■■□□ 2.97
PSPC1-204ENST00000492741 RRBP1Q9P2E9 1410 aaKnown RBP33.57■■■□□ 2.96
PSPC1-204ENST00000492741 FGD6Q6ZV73 1430 aa33.56■■■□□ 2.96
PSPC1-204ENST00000492741 FAM50AQ14320 339 aaKnown RBP33.56■■■□□ 2.96
PSPC1-204ENST00000492741 GPATCH8Q9UKJ3 1502 aaKnown RBP33.54■■■□□ 2.96
PSPC1-204ENST00000492741 CFDP1Q9UEE9 299 aaPredicted RBP33.54■■■□□ 2.96
PSPC1-204ENST00000492741 TTC37Q6PGP7 1564 aa33.51■■■□□ 2.96
PSPC1-204ENST00000492741 MIA2Q96PC5 1412 aa33.5■■■□□ 2.95
PSPC1-204ENST00000492741 ITSN2Q9NZM3 1697 aa33.49■■■□□ 2.95
PSPC1-204ENST00000492741 ZNF777Q9ULD5 760 aaPredicted RBP33.48■■■□□ 2.95
PSPC1-204ENST00000492741 CDC42BPAQ5VT25 1732 aa33.46■■■□□ 2.95
PSPC1-204ENST00000492741 ABCA9Q8IUA7 1624 aa33.43■■■□□ 2.94
PSPC1-204ENST00000492741 PTPN23Q9H3S7 1636 aa33.43■■■□□ 2.94
PSPC1-204ENST00000492741 MYO5CQ9NQX4 1742 aa33.41■■■□□ 2.94
PSPC1-204ENST00000492741 ITGAEP38570 1179 aa33.41■■■□□ 2.94
PSPC1-204ENST00000492741 PLCH2O75038 1416 aa33.4■■■□□ 2.94
PSPC1-204ENST00000492741 FAM69CQ0P6D2 419 aa33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms