RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 CYB5RLQ6IPT4 315 aa29.94■■■□□ 2.38
LMNB1-206ENST00000492190 RAPGEF2Q9Y4G8 1499 aa29.91■■■□□ 2.38
LMNB1-206ENST00000492190 KIAA0586Q9BVV6 1533 aa29.9■■■□□ 2.38
LMNB1-206ENST00000492190 JPH4Q96JJ6 628 aa29.86■■■□□ 2.37
LMNB1-206ENST00000492190 PRXQ9BXM0 1461 aa29.83■■■□□ 2.37
LMNB1-206ENST00000492190 PRG4Q92954 1404 aaPredicted RBP29.83■■■□□ 2.37
LMNB1-206ENST00000492190 IQGAP2Q13576 1575 aa29.76■■■□□ 2.35
LMNB1-206ENST00000492190 EEA1Q15075 1411 aa29.75■■■□□ 2.35
LMNB1-206ENST00000492190 CSRNP3Q8WYN3 585 aa29.75■■■□□ 2.35
LMNB1-206ENST00000492190 CTTNBP2Q8WZ74 1663 aa29.73■■■□□ 2.35
LMNB1-206ENST00000492190 FAM9AQ8IZU1 332 aaPredicted RBP29.68■■■□□ 2.34
LMNB1-206ENST00000492190 UGGT2Q9NYU1 1516 aa29.6■■■□□ 2.33
LMNB1-206ENST00000492190 DISP1Q96F81 1524 aa29.58■■■□□ 2.33
LMNB1-206ENST00000492190 KIF21BO75037 1637 aa29.55■■■□□ 2.32
LMNB1-206ENST00000492190 CARMIL2Q6F5E8 1435 aa29.52■■■□□ 2.32
LMNB1-206ENST00000492190 KIAA0556O60303 1618 aa29.49■■■□□ 2.31
LMNB1-206ENST00000492190 TNIKQ9UKE5 1360 aa29.46■■■□□ 2.31
LMNB1-206ENST00000492190 ADCY10Q96PN6 1610 aa29.45■■■□□ 2.31
LMNB1-206ENST00000492190 PTPRGP23470 1445 aa29.45■■■□□ 2.3
LMNB1-206ENST00000492190 TTBK1Q5TCY1 1321 aaPredicted RBP29.4■■■□□ 2.3
LMNB1-206ENST00000492190 GOLGA3Q08378 1498 aa29.36■■■□□ 2.29
LMNB1-206ENST00000492190 SAMD9Q5K651 1589 aa29.32■■■□□ 2.28
LMNB1-206ENST00000492190 EHMT2Q96KQ7 1210 aa29.31■■■□□ 2.28
LMNB1-206ENST00000492190 TRHP20396 242 aaPredicted RBP29.29■■■□□ 2.28
LMNB1-206ENST00000492190 UACAQ9BZF9 1416 aa29.26■■■□□ 2.27
LMNB1-206ENST00000492190 UHRF1BP1LA0JNW5 1464 aa29.25■■■□□ 2.27
LMNB1-206ENST00000492190 ABCC2Q92887 1545 aa29.24■■■□□ 2.27
LMNB1-206ENST00000492190 P3H3Q8IVL6 736 aa29.22■■■□□ 2.27
LMNB1-206ENST00000492190 KIF13AQ9H1H9 1805 aa29.22■■■□□ 2.27
LMNB1-206ENST00000492190 MAPKBP1O60336 1514 aa29.2■■■□□ 2.27
LMNB1-206ENST00000492190 UBTFP17480 764 aaKnown RBP29.2■■■□□ 2.26
LMNB1-206ENST00000492190 PLB1Q6P1J6 1458 aa29.19■■■□□ 2.26
LMNB1-206ENST00000492190 RANGAP1P46060 587 aaPredicted RBP29.19■■■□□ 2.26
LMNB1-206ENST00000492190 ABCA8O94911 1581 aa29.18■■■□□ 2.26
LMNB1-206ENST00000492190 NPM1P06748 294 aaKnown RBP eCLIP29.18■■■□□ 2.26
LMNB1-206ENST00000492190 KDM5BQ9UGL1 1544 aa29.13■■■□□ 2.25
LMNB1-206ENST00000492190 ZCCHC11Q5TAX3 1644 aaKnown RBP29.12■■■□□ 2.25
LMNB1-206ENST00000492190 EFCAB5A4FU69 1503 aa29.11■■■□□ 2.25
LMNB1-206ENST00000492190 FHOD3Q2V2M9 1422 aa29.11■■■□□ 2.25
LMNB1-206ENST00000492190 DIP2BQ9P265 1576 aa29.07■■■□□ 2.24
LMNB1-206ENST00000492190 ABCC10Q5T3U5 1492 aa29.06■■■□□ 2.24
LMNB1-206ENST00000492190 ASXL2Q76L83 1435 aa29.03■■■□□ 2.24
LMNB1-206ENST00000492190 RAPGEF6Q8TEU7 1601 aa29.02■■■□□ 2.24
LMNB1-206ENST00000492190 ARHGAP35Q9NRY4 1499 aa29.02■■■□□ 2.24
LMNB1-206ENST00000492190 FAM69CQ0P6D2 419 aa28.97■■■□□ 2.23
LMNB1-206ENST00000492190 ATP10BO94823 1461 aa28.92■■■□□ 2.22
LMNB1-206ENST00000492190 TSPOAP1O95153 1857 aa28.92■■■□□ 2.22
LMNB1-206ENST00000492190 NUP153P49790 1475 aaKnown RBP28.91■■■□□ 2.22
LMNB1-206ENST00000492190 ARID3CA6NKF2 412 aa28.9■■■□□ 2.22
LMNB1-206ENST00000492190 GLI2P10070 1586 aa28.88■■■□□ 2.21
LMNB1-206ENST00000492190 EPRSP07814 1512 aaKnown RBP28.88■■■□□ 2.21
LMNB1-206ENST00000492190 WDR7Q9Y4E6 1490 aa28.87■■■□□ 2.21
LMNB1-206ENST00000492190 PPRC1Q5VV67 1664 aaKnown RBP28.82■■■□□ 2.2
LMNB1-206ENST00000492190 FMN1Q68DA7 1419 aa28.8■■■□□ 2.2
LMNB1-206ENST00000492190 CLIP1P30622 1438 aa28.79■■■□□ 2.2
LMNB1-206ENST00000492190 MAP3K4Q9Y6R4 1608 aa28.79■■■□□ 2.2
LMNB1-206ENST00000492190 LOC105371045A0A1W2PR82 267 aa28.77■■■□□ 2.2
LMNB1-206ENST00000492190 LRRIQ1Q96JM4 1722 aa28.75■■■□□ 2.19
LMNB1-206ENST00000492190 KCNH8Q96L42 1107 aa28.73■■■□□ 2.19
LMNB1-206ENST00000492190 HECW1Q76N89 1606 aa28.72■■■□□ 2.19
LMNB1-206ENST00000492190 CDK13Q14004 1512 aaKnown RBP28.72■■■□□ 2.19
LMNB1-206ENST00000492190 CFAP43Q8NDM7 1665 aa28.7■■■□□ 2.18
LMNB1-206ENST00000492190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.69■■■□□ 2.18
LMNB1-206ENST00000492190 HNRNPUL2Q1KMD3 747 aaKnown RBP28.69■■■□□ 2.18
LMNB1-206ENST00000492190 PCF11O94913 1555 aaKnown RBP28.69■■■□□ 2.18
LMNB1-206ENST00000492190 CEP162Q5TB80 1403 aa28.68■■■□□ 2.18
LMNB1-206ENST00000492190 ABCA9Q8IUA7 1624 aa28.63■■■□□ 2.17
LMNB1-206ENST00000492190 ATP1B4Q9UN42 357 aaPredicted RBP28.63■■■□□ 2.17
LMNB1-206ENST00000492190 CASKIN1Q8WXD9 1431 aa28.62■■■□□ 2.17
LMNB1-206ENST00000492190 CD109Q6YHK3 1445 aa28.6■■■□□ 2.17
LMNB1-206ENST00000492190 KDM6BO15054 1643 aa28.58■■■□□ 2.17
LMNB1-206ENST00000492190 PLEKHD1A6NEE1 506 aa28.57■■■□□ 2.16
LMNB1-206ENST00000492190 MAGI3Q5TCQ9 1506 aa28.56■■■□□ 2.16
LMNB1-206ENST00000492190 FYCO1Q9BQS8 1478 aa28.55■■■□□ 2.16
LMNB1-206ENST00000492190 TEX14Q8IWB6 1497 aa28.53■■■□□ 2.16
LMNB1-206ENST00000492190 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.49■■■□□ 2.151e-6■□□□□ 10.8
LMNB1-206ENST00000492190 COL17A1Q9UMD9 1497 aaPredicted RBP28.49■■■□□ 2.15
LMNB1-206ENST00000492190 TTC37Q6PGP7 1564 aa28.49■■■□□ 2.15
LMNB1-206ENST00000492190 CCDC18Q5T9S5 1454 aa28.47■■■□□ 2.15
LMNB1-206ENST00000492190 KIF14Q15058 1648 aa28.46■■■□□ 2.15
LMNB1-206ENST00000492190 TROQ12816 1431 aaPredicted RBP28.43■■■□□ 2.14
LMNB1-206ENST00000492190 CDK11AQ9UQ88 783 aaPredicted RBP28.41■■■□□ 2.14
LMNB1-206ENST00000492190 MYO5CQ9NQX4 1742 aa28.35■■■□□ 2.13
LMNB1-206ENST00000492190 NEO1Q92859 1461 aa28.33■■■□□ 2.13
LMNB1-206ENST00000492190 ARAP3Q8WWN8 1544 aa28.33■■■□□ 2.13
LMNB1-206ENST00000492190 VPS8Q8N3P4 1428 aa28.32■■■□□ 2.12
LMNB1-206ENST00000492190 PLCH2O75038 1416 aa28.27■■■□□ 2.12
LMNB1-206ENST00000492190 FANCAO15360 1455 aa28.27■■■□□ 2.12
LMNB1-206ENST00000492190 CDC42BPBQ9Y5S2 1711 aa28.26■■■□□ 2.12
LMNB1-206ENST00000492190 PHLDB1Q86UU1 1377 aa28.26■■■□□ 2.12
LMNB1-206ENST00000492190 CFAP74Q9C0B2 1584 aa28.26■■■□□ 2.11
LMNB1-206ENST00000492190 CDC42BPAQ5VT25 1732 aa28.24■■■□□ 2.11
LMNB1-206ENST00000492190 AKNAQ7Z591 1439 aa28.23■■■□□ 2.11
LMNB1-206ENST00000492190 FRMPD1Q5SYB0 1578 aa28.22■■■□□ 2.11
LMNB1-206ENST00000492190 PREX2Q70Z35 1606 aa28.21■■■□□ 2.11
LMNB1-206ENST00000492190 RICTORQ6R327 1708 aa28.2■■■□□ 2.1
LMNB1-206ENST00000492190 TIAM1Q13009 1591 aa28.2■■■□□ 2.1
LMNB1-206ENST00000492190 MTUS2Q5JR59 1369 aa28.17■■■□□ 2.1
LMNB1-206ENST00000492190 RAPGEF3O95398 923 aa28.17■■■□□ 2.1
LMNB1-206ENST00000492190 EHBP1L1Q8N3D4 1523 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms