RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 PRG4Q92954 1404 aaPredicted RBP23.26■■□□□ 1.31
CDK9-204ENST00000491521 JPH4Q96JJ6 628 aa23.25■■□□□ 1.31
CDK9-204ENST00000491521 CARMIL1Q5VZK9 1371 aa23.18■■□□□ 1.3
CDK9-204ENST00000491521 KIAA0586Q9BVV6 1533 aa23.13■■□□□ 1.29
CDK9-204ENST00000491521 TTBK1Q5TCY1 1321 aaPredicted RBP23.06■■□□□ 1.28
CDK9-204ENST00000491521 IQGAP2Q13576 1575 aa23■■□□□ 1.27
CDK9-204ENST00000491521 RAPGEF2Q9Y4G8 1499 aa22.99■■□□□ 1.27
CDK9-204ENST00000491521 NPM1P06748 294 aaKnown RBP eCLIP22.97■■□□□ 1.27
CDK9-204ENST00000491521 ADCY10Q96PN6 1610 aa22.97■■□□□ 1.27
CDK9-204ENST00000491521 CARMIL2Q6F5E8 1435 aa22.93■■□□□ 1.26
CDK9-204ENST00000491521 PTPRGP23470 1445 aa22.92■■□□□ 1.26
CDK9-204ENST00000491521 KIF13AQ9H1H9 1805 aa22.9■■□□□ 1.26
CDK9-204ENST00000491521 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.25
CDK9-204ENST00000491521 DISP1Q96F81 1524 aa22.85■■□□□ 1.25
CDK9-204ENST00000491521 FAM69CQ0P6D2 419 aa22.84■■□□□ 1.25
CDK9-204ENST00000491521 CHIC1Q5VXU3 224 aa22.83■■□□□ 1.25
CDK9-204ENST00000491521 CTTNBP2Q8WZ74 1663 aa22.83■■□□□ 1.24
CDK9-204ENST00000491521 MAPKBP1O60336 1514 aa22.82■■□□□ 1.24
CDK9-204ENST00000491521 UGGT2Q9NYU1 1516 aa22.81■■□□□ 1.24
CDK9-204ENST00000491521 ABCC10Q5T3U5 1492 aa22.79■■□□□ 1.24
CDK9-204ENST00000491521 KIAA0556O60303 1618 aa22.78■■□□□ 1.24
CDK9-204ENST00000491521 PRXQ9BXM0 1461 aa22.78■■□□□ 1.24
CDK9-204ENST00000491521 DIP2BQ9P265 1576 aa22.77■■□□□ 1.24
CDK9-204ENST00000491521 ABCC2Q92887 1545 aa22.74■■□□□ 1.23
CDK9-204ENST00000491521 UACAQ9BZF9 1416 aa22.74■■□□□ 1.23
CDK9-204ENST00000491521 TSPOAP1O95153 1857 aa22.72■■□□□ 1.23
CDK9-204ENST00000491521 FAM9AQ8IZU1 332 aaPredicted RBP22.71■■□□□ 1.23
CDK9-204ENST00000491521 CSRNP3Q8WYN3 585 aa22.71■■□□□ 1.23
CDK9-204ENST00000491521 UHRF1BP1LA0JNW5 1464 aa22.69■■□□□ 1.22
CDK9-204ENST00000491521 GOLGA3Q08378 1498 aa22.67■■□□□ 1.22
CDK9-204ENST00000491521 ASXL2Q76L83 1435 aa22.67■■□□□ 1.22
CDK9-204ENST00000491521 P3H3Q8IVL6 736 aa22.63■■□□□ 1.21
CDK9-204ENST00000491521 ZCCHC11Q5TAX3 1644 aaKnown RBP22.63■■□□□ 1.21
CDK9-204ENST00000491521 PLB1Q6P1J6 1458 aa22.62■■□□□ 1.21
CDK9-204ENST00000491521 EEA1Q15075 1411 aa22.6■■□□□ 1.21
CDK9-204ENST00000491521 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
CDK9-204ENST00000491521 KDM5BQ9UGL1 1544 aa22.6■■□□□ 1.21
CDK9-204ENST00000491521 KDM6BO15054 1643 aa22.54■■□□□ 1.2
CDK9-204ENST00000491521 AEBP2Q6ZN18 517 aaPredicted RBP22.54■■□□□ 1.2
CDK9-204ENST00000491521 EHMT2Q96KQ7 1210 aa22.54■■□□□ 1.2
CDK9-204ENST00000491521 ARID3CA6NKF2 412 aa22.53■■□□□ 1.2
CDK9-204ENST00000491521 ABCA8O94911 1581 aa22.53■■□□□ 1.2
CDK9-204ENST00000491521 GLI2P10070 1586 aa22.52■■□□□ 1.2
CDK9-204ENST00000491521 EPRSP07814 1512 aaKnown RBP22.52■■□□□ 1.19
CDK9-204ENST00000491521 PPRC1Q5VV67 1664 aaKnown RBP22.49■■□□□ 1.19
CDK9-204ENST00000491521 WDR7Q9Y4E6 1490 aa22.47■■□□□ 1.19
CDK9-204ENST00000491521 SAMD9Q5K651 1589 aa22.47■■□□□ 1.19
CDK9-204ENST00000491521 KCNH8Q96L42 1107 aa22.46■■□□□ 1.19
CDK9-204ENST00000491521 KIF21BO75037 1637 aa22.45■■□□□ 1.18
CDK9-204ENST00000491521 MAP3K4Q9Y6R4 1608 aa22.44■■□□□ 1.18
CDK9-204ENST00000491521 FHOD3Q2V2M9 1422 aa22.4■■□□□ 1.18
CDK9-204ENST00000491521 RAPGEF6Q8TEU7 1601 aa22.38■■□□□ 1.17
CDK9-204ENST00000491521 UBTFP17480 764 aaKnown RBP22.37■■□□□ 1.17
CDK9-204ENST00000491521 ATP10BO94823 1461 aa22.36■■□□□ 1.17
CDK9-204ENST00000491521 TEX14Q8IWB6 1497 aa22.36■■□□□ 1.17
CDK9-204ENST00000491521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.36■■□□□ 1.17
CDK9-204ENST00000491521 HNRNPUL2Q1KMD3 747 aaKnown RBP22.36■■□□□ 1.17
CDK9-204ENST00000491521 CD109Q6YHK3 1445 aa22.33■■□□□ 1.17
CDK9-204ENST00000491521 CFAP43Q8NDM7 1665 aa22.32■■□□□ 1.16
CDK9-204ENST00000491521 COL17A1Q9UMD9 1497 aaPredicted RBP22.3■■□□□ 1.16
CDK9-204ENST00000491521 EFCAB5A4FU69 1503 aa22.29■■□□□ 1.16
CDK9-204ENST00000491521 NUP153P49790 1475 aaKnown RBP22.28■■□□□ 1.16
CDK9-204ENST00000491521 MAGI3Q5TCQ9 1506 aa22.24■■□□□ 1.15
CDK9-204ENST00000491521 KDM4FA0A1W2PPD8 638 aa22.2■■□□□ 1.14
CDK9-204ENST00000491521 ATP1B4Q9UN42 357 aaPredicted RBP22.2■■□□□ 1.14
CDK9-204ENST00000491521 ABCA9Q8IUA7 1624 aa22.18■■□□□ 1.14
CDK9-204ENST00000491521 PLEKHD1A6NEE1 506 aa22.15■■□□□ 1.14
CDK9-204ENST00000491521 ARHGAP35Q9NRY4 1499 aa22.15■■□□□ 1.14
CDK9-204ENST00000491521 CDK13Q14004 1512 aaKnown RBP22.14■■□□□ 1.13
CDK9-204ENST00000491521 ADGRL1O94910 1474 aa22.1■■□□□ 1.13
CDK9-204ENST00000491521 FMN1Q68DA7 1419 aa22.09■■□□□ 1.13
CDK9-204ENST00000491521 HECW1Q76N89 1606 aa22.07■■□□□ 1.12
CDK9-204ENST00000491521 ARAP3Q8WWN8 1544 aa22.06■■□□□ 1.12
CDK9-204ENST00000491521 RAPGEF3O95398 923 aa22.04■■□□□ 1.12
CDK9-204ENST00000491521 TTC37Q6PGP7 1564 aa22.04■■□□□ 1.12
CDK9-204ENST00000491521 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.03■■□□□ 1.12
CDK9-204ENST00000491521 NEO1Q92859 1461 aa22.03■■□□□ 1.12
CDK9-204ENST00000491521 PHLDB1Q86UU1 1377 aa22.01■■□□□ 1.11
CDK9-204ENST00000491521 LOC105371045A0A1W2PR82 267 aa21.97■■□□□ 1.11
CDK9-204ENST00000491521 LRRIQ1Q96JM4 1722 aa21.97■■□□□ 1.11
CDK9-204ENST00000491521 FANCAO15360 1455 aa21.96■■□□□ 1.11
CDK9-204ENST00000491521 CDK11AQ9UQ88 783 aaPredicted RBP21.95■■□□□ 1.1
CDK9-204ENST00000491521 AKNAQ7Z591 1439 aa21.95■■□□□ 1.1
CDK9-204ENST00000491521 PCF11O94913 1555 aaKnown RBP21.95■■□□□ 1.1
CDK9-204ENST00000491521 FRMPD1Q5SYB0 1578 aa21.95■■□□□ 1.1
CDK9-204ENST00000491521 CFAP74Q9C0B2 1584 aa21.95■■□□□ 1.1
CDK9-204ENST00000491521 KIF14Q15058 1648 aa21.92■■□□□ 1.1
CDK9-204ENST00000491521 CLIP1P30622 1438 aa21.92■■□□□ 1.1
CDK9-204ENST00000491521 DENND4BO75064 1496 aaPredicted RBP21.91■■□□□ 1.1
CDK9-204ENST00000491521 RICTORQ6R327 1708 aa21.89■■□□□ 1.09
CDK9-204ENST00000491521 MYO5CQ9NQX4 1742 aa21.89■■□□□ 1.09
CDK9-204ENST00000491521 TROQ12816 1431 aaPredicted RBP21.89■■□□□ 1.09
CDK9-204ENST00000491521 CASKIN1Q8WXD9 1431 aa21.89■■□□□ 1.09
CDK9-204ENST00000491521 ARID4BQ4LE39 1312 aaPredicted RBP21.87■■□□□ 1.09
CDK9-204ENST00000491521 PLCH2O75038 1416 aa21.87■■□□□ 1.09
CDK9-204ENST00000491521 CCDC18Q5T9S5 1454 aa21.84■■□□□ 1.09
CDK9-204ENST00000491521 FYCO1Q9BQS8 1478 aa21.83■■□□□ 1.08
CDK9-204ENST00000491521 SCAPERQ9BY12 1400 aa21.82■■□□□ 1.08
CDK9-204ENST00000491521 ARHGEF40Q8TER5 1519 aa21.82■■□□□ 1.08
CDK9-204ENST00000491521 EFCAB2Q5VUJ9 269 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms