RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 ADCY10Q96PN6 1610 aa20.85■□□□□ 0.93
SRSF4-204ENST00000489898 KIAA0586Q9BVV6 1533 aa20.83■□□□□ 0.92
SRSF4-204ENST00000489898 PRG4Q92954 1404 aaPredicted RBP20.82■□□□□ 0.92
SRSF4-204ENST00000489898 CTTNBP2Q8WZ74 1663 aa20.79■□□□□ 0.92
SRSF4-204ENST00000489898 IQGAP2Q13576 1575 aa20.77■□□□□ 0.92
SRSF4-204ENST00000489898 CARMIL1Q5VZK9 1371 aa20.72■□□□□ 0.91
SRSF4-204ENST00000489898 MAPKBP1O60336 1514 aa20.7■□□□□ 0.9
SRSF4-204ENST00000489898 DISP1Q96F81 1524 aa20.68■□□□□ 0.9
SRSF4-204ENST00000489898 DIP2BQ9P265 1576 aa20.68■□□□□ 0.9
SRSF4-204ENST00000489898 JPH4Q96JJ6 628 aa20.68■□□□□ 0.9
SRSF4-204ENST00000489898 UGGT2Q9NYU1 1516 aa20.66■□□□□ 0.9
SRSF4-204ENST00000489898 KIAA0556O60303 1618 aa20.65■□□□□ 0.9
SRSF4-204ENST00000489898 RAPGEF2Q9Y4G8 1499 aa20.64■□□□□ 0.89
SRSF4-204ENST00000489898 PRXQ9BXM0 1461 aa20.62■□□□□ 0.89
SRSF4-204ENST00000489898 PPRC1Q5VV67 1664 aaKnown RBP20.56■□□□□ 0.88
SRSF4-204ENST00000489898 TRHP20396 242 aaPredicted RBP20.55■□□□□ 0.88
SRSF4-204ENST00000489898 ABCC10Q5T3U5 1492 aa20.54■□□□□ 0.88
SRSF4-204ENST00000489898 ABCC2Q92887 1545 aa20.53■□□□□ 0.88
SRSF4-204ENST00000489898 UHRF1BP1LA0JNW5 1464 aa20.51■□□□□ 0.87
SRSF4-204ENST00000489898 ZCCHC11Q5TAX3 1644 aaKnown RBP20.51■□□□□ 0.87
SRSF4-204ENST00000489898 TNIKQ9UKE5 1360 aa20.46■□□□□ 0.87
SRSF4-204ENST00000489898 SAMD9Q5K651 1589 aa20.46■□□□□ 0.87
SRSF4-204ENST00000489898 TSPOAP1O95153 1857 aa20.45■□□□□ 0.86
SRSF4-204ENST00000489898 KDM5BQ9UGL1 1544 aa20.44■□□□□ 0.86
SRSF4-204ENST00000489898 ABCA8O94911 1581 aa20.44■□□□□ 0.86
SRSF4-204ENST00000489898 PTPRGP23470 1445 aa20.44■□□□□ 0.86
SRSF4-204ENST00000489898 CARMIL2Q6F5E8 1435 aa20.44■□□□□ 0.86
SRSF4-204ENST00000489898 GLI2P10070 1586 aa20.42■□□□□ 0.86
SRSF4-204ENST00000489898 MAP3K4Q9Y6R4 1608 aa20.42■□□□□ 0.86
SRSF4-204ENST00000489898 UACAQ9BZF9 1416 aa20.38■□□□□ 0.85
SRSF4-204ENST00000489898 KIF21BO75037 1637 aa20.38■□□□□ 0.85
SRSF4-204ENST00000489898 PLB1Q6P1J6 1458 aa20.35■□□□□ 0.85
SRSF4-204ENST00000489898 ASXL2Q76L83 1435 aa20.34■□□□□ 0.85
SRSF4-204ENST00000489898 KDM6BO15054 1643 aa20.31■□□□□ 0.84
SRSF4-204ENST00000489898 GOLGA3Q08378 1498 aa20.3■□□□□ 0.84
SRSF4-204ENST00000489898 EEA1Q15075 1411 aa20.29■□□□□ 0.84
SRSF4-204ENST00000489898 EPRSP07814 1512 aaKnown RBP20.29■□□□□ 0.84
SRSF4-204ENST00000489898 CFAP43Q8NDM7 1665 aa20.25■□□□□ 0.83
SRSF4-204ENST00000489898 RAPGEF6Q8TEU7 1601 aa20.23■□□□□ 0.83
SRSF4-204ENST00000489898 FAM69CQ0P6D2 419 aa20.22■□□□□ 0.83
SRSF4-204ENST00000489898 WDR7Q9Y4E6 1490 aa20.22■□□□□ 0.83
SRSF4-204ENST00000489898 CSRNP3Q8WYN3 585 aa20.17■□□□□ 0.82
SRSF4-204ENST00000489898 COL17A1Q9UMD9 1497 aaPredicted RBP20.17■□□□□ 0.82
SRSF4-204ENST00000489898 TTBK1Q5TCY1 1321 aaPredicted RBP20.16■□□□□ 0.82
SRSF4-204ENST00000489898 EFCAB5A4FU69 1503 aa20.15■□□□□ 0.82
SRSF4-204ENST00000489898 ABCA9Q8IUA7 1624 aa20.14■□□□□ 0.81
SRSF4-204ENST00000489898 NPM1P06748 294 aaKnown RBP eCLIP20.14■□□□□ 0.81
SRSF4-204ENST00000489898 LRRIQ1Q96JM4 1722 aa20.13■□□□□ 0.81
SRSF4-204ENST00000489898 NUP153P49790 1475 aaKnown RBP20.13■□□□□ 0.81
SRSF4-204ENST00000489898 ATP10BO94823 1461 aa20.11■□□□□ 0.81
SRSF4-204ENST00000489898 FHOD3Q2V2M9 1422 aa20.09■□□□□ 0.81
SRSF4-204ENST00000489898 MAGI3Q5TCQ9 1506 aa20.07■□□□□ 0.8
SRSF4-204ENST00000489898 CHIC1Q5VXU3 224 aa20.07■□□□□ 0.8
SRSF4-204ENST00000489898 TEX14Q8IWB6 1497 aa20.03■□□□□ 0.8
SRSF4-204ENST00000489898 FRMPD1Q5SYB0 1578 aa20.02■□□□□ 0.8
SRSF4-204ENST00000489898 ARHGAP35Q9NRY4 1499 aa20■□□□□ 0.79
SRSF4-204ENST00000489898 TTC37Q6PGP7 1564 aa19.99■□□□□ 0.79
SRSF4-204ENST00000489898 P3H3Q8IVL6 736 aa19.95■□□□□ 0.78
SRSF4-204ENST00000489898 CDK13Q14004 1512 aaKnown RBP19.95■□□□□ 0.78
SRSF4-204ENST00000489898 FAM9AQ8IZU1 332 aaPredicted RBP19.94■□□□□ 0.78
SRSF4-204ENST00000489898 CD109Q6YHK3 1445 aa19.93■□□□□ 0.78
SRSF4-204ENST00000489898 RICTORQ6R327 1708 aa19.93■□□□□ 0.78
SRSF4-204ENST00000489898 ARAP3Q8WWN8 1544 aa19.92■□□□□ 0.78
SRSF4-204ENST00000489898 HECW1Q76N89 1606 aa19.92■□□□□ 0.78
SRSF4-204ENST00000489898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.92■□□□□ 0.78
SRSF4-204ENST00000489898 PCF11O94913 1555 aaKnown RBP19.9■□□□□ 0.78
SRSF4-204ENST00000489898 SIGLEC1Q9BZZ2 1709 aa19.88■□□□□ 0.77
SRSF4-204ENST00000489898 KIF14Q15058 1648 aa19.87■□□□□ 0.77
SRSF4-204ENST00000489898 ADGRL1O94910 1474 aa19.86■□□□□ 0.77
SRSF4-204ENST00000489898 KDM4FA0A1W2PPD8 638 aa19.85■□□□□ 0.77
SRSF4-204ENST00000489898 ARID3CA6NKF2 412 aa19.84■□□□□ 0.77
SRSF4-204ENST00000489898 MYO5CQ9NQX4 1742 aa19.83■□□□□ 0.77
SRSF4-204ENST00000489898 NEO1Q92859 1461 aa19.83■□□□□ 0.76
SRSF4-204ENST00000489898 CFAP74Q9C0B2 1584 aa19.83■□□□□ 0.76
SRSF4-204ENST00000489898 ARHGEF40Q8TER5 1519 aa19.81■□□□□ 0.76
SRSF4-204ENST00000489898 ZMYM4Q5VZL5 1548 aa19.78■□□□□ 0.76
SRSF4-204ENST00000489898 FMN1Q68DA7 1419 aa19.77■□□□□ 0.76
SRSF4-204ENST00000489898 CDC42BPBQ9Y5S2 1711 aa19.77■□□□□ 0.76
SRSF4-204ENST00000489898 KCNH8Q96L42 1107 aa19.77■□□□□ 0.76
SRSF4-204ENST00000489898 ADAMTSL3P82987 1691 aa19.77■□□□□ 0.76
SRSF4-204ENST00000489898 RANGAP1P46060 587 aaPredicted RBP19.75■□□□□ 0.75
SRSF4-204ENST00000489898 BCORL1Q5H9F3 1711 aa19.73■□□□□ 0.75
SRSF4-204ENST00000489898 CDC42BPAQ5VT25 1732 aa19.73■□□□□ 0.75
SRSF4-204ENST00000489898 PREX2Q70Z35 1606 aa19.73■□□□□ 0.75
SRSF4-204ENST00000489898 FANCAO15360 1455 aa19.7■□□□□ 0.74
SRSF4-204ENST00000489898 CASKIN1Q8WXD9 1431 aa19.68■□□□□ 0.74
SRSF4-204ENST00000489898 EHMT2Q96KQ7 1210 aa19.68■□□□□ 0.74
SRSF4-204ENST00000489898 PHLDB1Q86UU1 1377 aa19.68■□□□□ 0.74
SRSF4-204ENST00000489898 FYCO1Q9BQS8 1478 aa19.67■□□□□ 0.74
SRSF4-204ENST00000489898 AEBP2Q6ZN18 517 aaPredicted RBP19.67■□□□□ 0.74
SRSF4-204ENST00000489898 TROQ12816 1431 aaPredicted RBP19.66■□□□□ 0.74
SRSF4-204ENST00000489898 MADDQ8WXG6 1647 aa19.65■□□□□ 0.74
SRSF4-204ENST00000489898 KDM5CP41229 1560 aa19.65■□□□□ 0.74
SRSF4-204ENST00000489898 ITSN2Q9NZM3 1697 aa19.65■□□□□ 0.74
SRSF4-204ENST00000489898 UBTFP17480 764 aaKnown RBP19.64■□□□□ 0.73
SRSF4-204ENST00000489898 AKNAQ7Z591 1439 aa19.64■□□□□ 0.73
SRSF4-204ENST00000489898 CCDC18Q5T9S5 1454 aa19.63■□□□□ 0.73
SRSF4-204ENST00000489898 PLCH2O75038 1416 aa19.63■□□□□ 0.73
SRSF4-204ENST00000489898 POGZQ7Z3K3 1410 aa19.61■□□□□ 0.73
SRSF4-204ENST00000489898 HECW2Q9P2P5 1572 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms