RNA–Protein interactions for RNA: ENST00000489647.4

POLR1D-206, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 1 (best) BASIC

Gene POLR1D, Length 1,723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-206ENST00000489647 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
POLR1D-206ENST00000489647 ERICH3Q5RHP9 1530 aa17.36■□□□□ 0.37
POLR1D-206ENST00000489647 UBTFP17480 764 aaKnown RBP17.35■□□□□ 0.37
POLR1D-206ENST00000489647 PBRM1Q86U86 1689 aa17.35■□□□□ 0.37
POLR1D-206ENST00000489647 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
POLR1D-206ENST00000489647 CUL7Q14999 1698 aa17.33■□□□□ 0.37
POLR1D-206ENST00000489647 AQRO60306 1485 aaKnown RBP eCLIP17.33■□□□□ 0.376e-7■□□□□ 10.5
POLR1D-206ENST00000489647 CARMIL1Q5VZK9 1371 aa17.32■□□□□ 0.36
POLR1D-206ENST00000489647 TNIKQ9UKE5 1360 aa17.32■□□□□ 0.36
POLR1D-206ENST00000489647 EIF4G3O43432 1585 aaKnown RBP17.3■□□□□ 0.36
POLR1D-206ENST00000489647 DCAF8L1A6NGE4 600 aa17.3■□□□□ 0.36
POLR1D-206ENST00000489647 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
POLR1D-206ENST00000489647 CEP162Q5TB80 1403 aa17.24■□□□□ 0.35
POLR1D-206ENST00000489647 ADAMTS12P58397 1594 aa17.21■□□□□ 0.35
POLR1D-206ENST00000489647 SNAPC4Q5SXM2 1469 aa17.18■□□□□ 0.34
POLR1D-206ENST00000489647 FHAD1B1AJZ9 1412 aa17.17■□□□□ 0.34
POLR1D-206ENST00000489647 CTTNBP2Q8WZ74 1663 aa17.16■□□□□ 0.34
POLR1D-206ENST00000489647 RANGAP1P46060 587 aaPredicted RBP17.15■□□□□ 0.34
POLR1D-206ENST00000489647 CLIP1P30622 1438 aa17.14■□□□□ 0.33
POLR1D-206ENST00000489647 MAGI1Q96QZ7 1491 aaPredicted RBP17.13■□□□□ 0.33
POLR1D-206ENST00000489647 POTEHQ6S545 545 aa17.07■□□□□ 0.32
POLR1D-206ENST00000489647 SYNJ2O15056 1496 aa17.07■□□□□ 0.32
POLR1D-206ENST00000489647 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
POLR1D-206ENST00000489647 CHMP7Q8WUX9 453 aaPredicted RBP17.03■□□□□ 0.32
POLR1D-206ENST00000489647 FBLN2P98095 1184 aa17.02■□□□□ 0.32
POLR1D-206ENST00000489647 ARHGAP35Q9NRY4 1499 aa17.01■□□□□ 0.31
POLR1D-206ENST00000489647 CHD1O14646 1710 aa17■□□□□ 0.31
POLR1D-206ENST00000489647 ARAP1Q96P48 1450 aa17■□□□□ 0.31
POLR1D-206ENST00000489647 IQGAP2Q13576 1575 aa16.98■□□□□ 0.31
POLR1D-206ENST00000489647 CEP170Q5SW79 1584 aa16.97■□□□□ 0.31
POLR1D-206ENST00000489647 EFCAB5A4FU69 1503 aa16.96■□□□□ 0.31
POLR1D-206ENST00000489647 VPS8Q8N3P4 1428 aa16.96■□□□□ 0.3
POLR1D-206ENST00000489647 KIAA0586Q9BVV6 1533 aa16.93■□□□□ 0.3
POLR1D-206ENST00000489647 SAMD9Q5K651 1589 aa16.92■□□□□ 0.3
POLR1D-206ENST00000489647 NUP160Q12769 1436 aa16.92■□□□□ 0.3
POLR1D-206ENST00000489647 P3H3Q8IVL6 736 aa16.91■□□□□ 0.3
POLR1D-206ENST00000489647 FHOD3Q2V2M9 1422 aa16.89■□□□□ 0.29
POLR1D-206ENST00000489647 UGGT2Q9NYU1 1516 aa16.88■□□□□ 0.29
POLR1D-206ENST00000489647 PPARGC1BQ86YN6 1023 aaKnown RBP16.85■□□□□ 0.29
POLR1D-206ENST00000489647 KIAA0556O60303 1618 aa16.81■□□□□ 0.28
POLR1D-206ENST00000489647 PCF11O94913 1555 aaKnown RBP16.81■□□□□ 0.28
POLR1D-206ENST00000489647 DISP1Q96F81 1524 aa16.8■□□□□ 0.28
POLR1D-206ENST00000489647 FMN1Q68DA7 1419 aa16.79■□□□□ 0.28
POLR1D-206ENST00000489647 APLP2Q06481 763 aa16.79■□□□□ 0.28
POLR1D-206ENST00000489647 JPH4Q96JJ6 628 aa16.79■□□□□ 0.28
POLR1D-206ENST00000489647 TTBK1Q5TCY1 1321 aaPredicted RBP16.76■□□□□ 0.27
POLR1D-206ENST00000489647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.275e-7■■■□□ 18.6
POLR1D-206ENST00000489647 FYCO1Q9BQS8 1478 aa16.75■□□□□ 0.27
POLR1D-206ENST00000489647 CASKIN1Q8WXD9 1431 aa16.74■□□□□ 0.27
POLR1D-206ENST00000489647 SHROOM2Q13796 1616 aa16.74■□□□□ 0.27
POLR1D-206ENST00000489647 CLASP1Q7Z460 1538 aa16.73■□□□□ 0.27
POLR1D-206ENST00000489647 CARMIL2Q6F5E8 1435 aa16.73■□□□□ 0.27
POLR1D-206ENST00000489647 RNF39Q9H2S5 420 aa16.73■□□□□ 0.27
POLR1D-206ENST00000489647 ATP1B4Q9UN42 357 aaPredicted RBP16.73■□□□□ 0.27
POLR1D-206ENST00000489647 PRG4Q92954 1404 aaPredicted RBP16.71■□□□□ 0.26
POLR1D-206ENST00000489647 LRRIQ1Q96JM4 1722 aa16.7■□□□□ 0.26
POLR1D-206ENST00000489647 TIAM1Q13009 1591 aa16.7■□□□□ 0.26
POLR1D-206ENST00000489647 CFAP43Q8NDM7 1665 aa16.7■□□□□ 0.26
POLR1D-206ENST00000489647 TRIM26Q12899 539 aaPredicted RBP16.68■□□□□ 0.26
POLR1D-206ENST00000489647 MAP3K1Q13233 1512 aa16.67■□□□□ 0.26
POLR1D-206ENST00000489647 PCGF6Q9BYE7 350 aa16.67■□□□□ 0.26
POLR1D-206ENST00000489647 HECW1Q76N89 1606 aa16.66■□□□□ 0.26
POLR1D-206ENST00000489647 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
POLR1D-206ENST00000489647 KANK4Q5T7N3 995 aaPredicted RBP16.65■□□□□ 0.26
POLR1D-206ENST00000489647 RAPGEF6Q8TEU7 1601 aa16.64■□□□□ 0.26
POLR1D-206ENST00000489647 ERCC6L2Q5T890 1561 aa16.64■□□□□ 0.25
POLR1D-206ENST00000489647 OSCARQ8IYS5 282 aa16.61■□□□□ 0.25
POLR1D-206ENST00000489647 PLB1Q6P1J6 1458 aa16.6■□□□□ 0.25
POLR1D-206ENST00000489647 LRRC9Q6ZRR7 1453 aa16.6■□□□□ 0.25
POLR1D-206ENST00000489647 CCDC18Q5T9S5 1454 aa16.59■□□□□ 0.25
POLR1D-206ENST00000489647 EPRSP07814 1512 aaKnown RBP16.58■□□□□ 0.24
POLR1D-206ENST00000489647 PTPRGP23470 1445 aa16.58■□□□□ 0.24
POLR1D-206ENST00000489647 NUP153P49790 1475 aaKnown RBP16.57■□□□□ 0.24
POLR1D-206ENST00000489647 CDK13Q14004 1512 aaKnown RBP16.57■□□□□ 0.24
POLR1D-206ENST00000489647 ARID3CA6NKF2 412 aa16.56■□□□□ 0.24
POLR1D-206ENST00000489647 ABCA8O94911 1581 aa16.56■□□□□ 0.24
POLR1D-206ENST00000489647 SLC4A2P04920 1241 aa16.55■□□□□ 0.24
POLR1D-206ENST00000489647 C1QBPQ07021 282 aaKnown RBP16.53■□□□□ 0.24
POLR1D-206ENST00000489647 MTUS2Q5JR59 1369 aa16.52■□□□□ 0.24
POLR1D-206ENST00000489647 MAGI3Q5TCQ9 1506 aa16.51■□□□□ 0.23
POLR1D-206ENST00000489647 EHBP1L1Q8N3D4 1523 aa16.51■□□□□ 0.23
POLR1D-206ENST00000489647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
POLR1D-206ENST00000489647 HNRNPUL2Q1KMD3 747 aaKnown RBP16.48■□□□□ 0.23
POLR1D-206ENST00000489647 SUPT6HQ7KZ85 1726 aaKnown RBP16.48■□□□□ 0.23
POLR1D-206ENST00000489647 UACAQ9BZF9 1416 aa16.48■□□□□ 0.23
POLR1D-206ENST00000489647 ABCC2Q92887 1545 aa16.44■□□□□ 0.22
POLR1D-206ENST00000489647 PHLDB1Q86UU1 1377 aa16.44■□□□□ 0.22
POLR1D-206ENST00000489647 ATP10BO94823 1461 aa16.44■□□□□ 0.22
POLR1D-206ENST00000489647 NCOA2Q15596 1464 aa16.43■□□□□ 0.22
POLR1D-206ENST00000489647 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
POLR1D-206ENST00000489647 CDK11AQ9UQ88 783 aaPredicted RBP16.42■□□□□ 0.22
POLR1D-206ENST00000489647 RRBP1Q9P2E9 1410 aaKnown RBP16.42■□□□□ 0.22
POLR1D-206ENST00000489647 UHRF1BP1LA0JNW5 1464 aa16.39■□□□□ 0.22
POLR1D-206ENST00000489647 ARHGEF11O15085 1522 aa16.39■□□□□ 0.21
POLR1D-206ENST00000489647 TROQ12816 1431 aaPredicted RBP16.39■□□□□ 0.21
POLR1D-206ENST00000489647 CCNB3Q8WWL7 1395 aa16.39■□□□□ 0.21
POLR1D-206ENST00000489647 ADCY10Q96PN6 1610 aa16.38■□□□□ 0.21
POLR1D-206ENST00000489647 ZCCHC11Q5TAX3 1644 aaKnown RBP16.37■□□□□ 0.21
POLR1D-206ENST00000489647 KIF14Q15058 1648 aa16.37■□□□□ 0.21
POLR1D-206ENST00000489647 PLEKHD1A6NEE1 506 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms