RNA–Protein interactions for RNA: ENST00000489647.4

POLR1D-206, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 1 (best) BASIC

Gene POLR1D, Length 1,723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-206ENST00000489647 AEBP2Q6ZN18 517 aaPredicted RBP26.64■■□□□ 1.85
POLR1D-206ENST00000489647 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
POLR1D-206ENST00000489647 NISCHQ9Y2I1 1504 aa24.72■■□□□ 1.55
POLR1D-206ENST00000489647 SENP3Q9H4L4 574 aaPredicted RBP22.69■■□□□ 1.22
POLR1D-206ENST00000489647 PHF23Q9BUL5 403 aaPredicted RBP22.61■■□□□ 1.21
POLR1D-206ENST00000489647 POTEDQ86YR6 584 aa22.31■■□□□ 1.16
POLR1D-206ENST00000489647 CCDC180Q9P1Z9 1646 aa21.65■■□□□ 1.06
POLR1D-206ENST00000489647 FOXD1Q16676 465 aa21.07■□□□□ 0.96
POLR1D-206ENST00000489647 PLPPR3Q6T4P5 718 aa20.81■□□□□ 0.92
POLR1D-206ENST00000489647 ZCCHC6Q5VYS8 1495 aaKnown RBP20.73■□□□□ 0.91
POLR1D-206ENST00000489647 ABCC9O60706 1549 aa20.6■□□□□ 0.89
POLR1D-206ENST00000489647 DCAF8L2P0C7V8 631 aa20.48■□□□□ 0.87
POLR1D-206ENST00000489647 DCAF1Q9Y4B6 1507 aa20.42■□□□□ 0.86
POLR1D-206ENST00000489647 MYO15BQ96JP2 1530 aa20.21■□□□□ 0.83
POLR1D-206ENST00000489647 NACADO15069 1562 aa20.17■□□□□ 0.82
POLR1D-206ENST00000489647 SHROOM4Q9ULL8 1493 aa20.1■□□□□ 0.81
POLR1D-206ENST00000489647 RB1CC1Q8TDY2 1594 aa20.05■□□□□ 0.8
POLR1D-206ENST00000489647 PPP6R1Q9UPN7 881 aa20.05■□□□□ 0.8
POLR1D-206ENST00000489647 ADRA2BP18089 450 aa20.02■□□□□ 0.79
POLR1D-206ENST00000489647 SCRIBQ14160 1630 aa19.91■□□□□ 0.78
POLR1D-206ENST00000489647 PIAS4Q8N2W9 510 aaPredicted RBP19.82■□□□□ 0.76
POLR1D-206ENST00000489647 UNC13AQ9UPW8 1703 aa19.72■□□□□ 0.75
POLR1D-206ENST00000489647 MSH5O43196 834 aa19.57■□□□□ 0.72
POLR1D-206ENST00000489647 BICRAQ9NZM4 1560 aa19.45■□□□□ 0.7
POLR1D-206ENST00000489647 PABPN1Q86U42 306 aaKnown RBP eCLIP19.38■□□□□ 0.69
POLR1D-206ENST00000489647 SUPT5HO00267 1087 aaKnown RBP19.25■□□□□ 0.67
POLR1D-206ENST00000489647 CECR2Q9BXF3 1484 aa19.22■□□□□ 0.67
POLR1D-206ENST00000489647 RSF1Q96T23 1441 aaPredicted RBP19.11■□□□□ 0.65
POLR1D-206ENST00000489647 MROH2BQ7Z745 1585 aa19.11■□□□□ 0.65
POLR1D-206ENST00000489647 BAZ1AQ9NRL2 1556 aaPredicted RBP19.11■□□□□ 0.65
POLR1D-206ENST00000489647 SMARCA4P51532 1647 aa19.06■□□□□ 0.64
POLR1D-206ENST00000489647 WIZO95785 1651 aa18.97■□□□□ 0.63
POLR1D-206ENST00000489647 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
POLR1D-206ENST00000489647 PEG3Q9GZU2 1588 aa18.8■□□□□ 0.6
POLR1D-206ENST00000489647 ATAD2BQ9ULI0 1458 aa18.75■□□□□ 0.59
POLR1D-206ENST00000489647 SMARCA2P51531 1590 aa18.75■□□□□ 0.59
POLR1D-206ENST00000489647 TOP2AP11388 1531 aaKnown RBP18.74■□□□□ 0.59
POLR1D-206ENST00000489647 BAZ1BQ9UIG0 1483 aaKnown RBP18.66■□□□□ 0.58
POLR1D-206ENST00000489647 CC2D2AQ9P2K1 1620 aa18.65■□□□□ 0.58
POLR1D-206ENST00000489647 NCAPD3P42695 1498 aa18.59■□□□□ 0.57
POLR1D-206ENST00000489647 HMGXB3Q12766 1538 aa18.58■□□□□ 0.57
POLR1D-206ENST00000489647 CCDC88BA6NC98 1476 aa18.53■□□□□ 0.56
POLR1D-206ENST00000489647 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
POLR1D-206ENST00000489647 PPP4R3CPQ6ZMV5 832 aa18.29■□□□□ 0.52
POLR1D-206ENST00000489647 DNAJC5BQ9UF47 199 aa18.26■□□□□ 0.51
POLR1D-206ENST00000489647 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
POLR1D-206ENST00000489647 PRDM2Q13029 1718 aa18.15■□□□□ 0.5
POLR1D-206ENST00000489647 CFTRP13569 1480 aa18.15■□□□□ 0.5
POLR1D-206ENST00000489647 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
POLR1D-206ENST00000489647 CADPSQ9ULU8 1353 aa18.11■□□□□ 0.49
POLR1D-206ENST00000489647 TRIM41Q8WV44 630 aa18.09■□□□□ 0.49
POLR1D-206ENST00000489647 DMRT2Q9Y5R5 561 aa18.06■□□□□ 0.48
POLR1D-206ENST00000489647 NESP48681 1621 aa18.04■□□□□ 0.48
POLR1D-206ENST00000489647 LAMC3Q9Y6N6 1575 aa18.02■□□□□ 0.48
POLR1D-206ENST00000489647 WRNQ14191 1432 aaPredicted RBP eCLIP18■□□□□ 0.47
POLR1D-206ENST00000489647 SYNJ1O43426 1573 aa17.96■□□□□ 0.47
POLR1D-206ENST00000489647 FANCD2Q9BXW9 1451 aa17.94■□□□□ 0.46
POLR1D-206ENST00000489647 TOP2BQ02880 1626 aa17.89■□□□□ 0.45
POLR1D-206ENST00000489647 BIVM-ERCC5R4GMW8 1640 aa17.89■□□□□ 0.45
POLR1D-206ENST00000489647 CUX1P39880 1505 aa17.88■□□□□ 0.45
POLR1D-206ENST00000489647 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
POLR1D-206ENST00000489647 PDS5BQ9NTI5 1447 aa17.86■□□□□ 0.45
POLR1D-206ENST00000489647 CEP164Q9UPV0 1460 aa17.85■□□□□ 0.45
POLR1D-206ENST00000489647 CNKSR2Q8WXI2 1034 aa17.85■□□□□ 0.45
POLR1D-206ENST00000489647 FAM9AQ8IZU1 332 aaPredicted RBP17.78■□□□□ 0.44
POLR1D-206ENST00000489647 DNMBPQ6XZF7 1577 aa17.76■□□□□ 0.43
POLR1D-206ENST00000489647 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
POLR1D-206ENST00000489647 SOGA1O94964 1423 aa17.74■□□□□ 0.43
POLR1D-206ENST00000489647 TOPBP1Q92547 1522 aa17.74■□□□□ 0.43
POLR1D-206ENST00000489647 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
POLR1D-206ENST00000489647 CACNB1Q02641 598 aaPredicted RBP17.72■□□□□ 0.43
POLR1D-206ENST00000489647 FGD5Q6ZNL6 1462 aa17.7■□□□□ 0.42
POLR1D-206ENST00000489647 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
POLR1D-206ENST00000489647 ERCC6Q03468 1493 aa17.68■□□□□ 0.42
POLR1D-206ENST00000489647 MRC2Q9UBG0 1479 aa17.66■□□□□ 0.42
POLR1D-206ENST00000489647 EEA1Q15075 1411 aa17.64■□□□□ 0.42
POLR1D-206ENST00000489647 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
POLR1D-206ENST00000489647 LOC105371045A0A1W2PR82 267 aa17.63■□□□□ 0.41
POLR1D-206ENST00000489647 THOC2Q8NI27 1593 aaKnown RBP17.58■□□□□ 0.4
POLR1D-206ENST00000489647 RAD54L2Q9Y4B4 1467 aa17.58■□□□□ 0.4
POLR1D-206ENST00000489647 WDR62O43379 1518 aa17.57■□□□□ 0.4
POLR1D-206ENST00000489647 HOXD11P31277 338 aaPredicted RBP17.57■□□□□ 0.4
POLR1D-206ENST00000489647 CSRNP3Q8WYN3 585 aa17.57■□□□□ 0.4
POLR1D-206ENST00000489647 RNF216Q9NWF9 866 aaPredicted RBP17.57■□□□□ 0.4
POLR1D-206ENST00000489647 EHMT2Q96KQ7 1210 aa17.56■□□□□ 0.4
POLR1D-206ENST00000489647 CUX2O14529 1486 aa17.56■□□□□ 0.4
POLR1D-206ENST00000489647 KIF27Q86VH2 1401 aa17.55■□□□□ 0.4
POLR1D-206ENST00000489647 KCNA4P22459 653 aa17.53■□□□□ 0.4
POLR1D-206ENST00000489647 WDR97A6NE52 1622 aa17.53■□□□□ 0.4
POLR1D-206ENST00000489647 ABCA10Q8WWZ4 1543 aa17.53■□□□□ 0.4
POLR1D-206ENST00000489647 TARBP1Q13395 1621 aaKnown RBP17.49■□□□□ 0.39
POLR1D-206ENST00000489647 KIF21BO75037 1637 aa17.47■□□□□ 0.39
POLR1D-206ENST00000489647 NPM3O75607 178 aaKnown RBP17.46■□□□□ 0.39
POLR1D-206ENST00000489647 ABCA5Q8WWZ7 1642 aa17.43■□□□□ 0.38
POLR1D-206ENST00000489647 GOLGA3Q08378 1498 aa17.42■□□□□ 0.38
POLR1D-206ENST00000489647 IFT140Q96RY7 1462 aa17.41■□□□□ 0.38
POLR1D-206ENST00000489647 TDRD9Q8NDG6 1382 aaKnown RBP17.41■□□□□ 0.38
POLR1D-206ENST00000489647 IGF1RP08069 1367 aa17.4■□□□□ 0.38
POLR1D-206ENST00000489647 PRXQ9BXM0 1461 aa17.39■□□□□ 0.37
POLR1D-206ENST00000489647 RAPGEF2Q9Y4G8 1499 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms