RNA–Protein interactions for RNA: ENST00000489337.5

SMTN-218, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 3,560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-218ENST00000489337 SUPT16HQ9Y5B9 1047 aaKnown RBP17.09■□□□□ 0.33
SMTN-218ENST00000489337 TOPBP1Q92547 1522 aa17.09■□□□□ 0.33
SMTN-218ENST00000489337 URB2Q14146 1524 aaKnown RBP17.07■□□□□ 0.32
SMTN-218ENST00000489337 CLSPNQ9HAW4 1339 aa17.05■□□□□ 0.32
SMTN-218ENST00000489337 TSHZ2Q9NRE2 1034 aa17.03■□□□□ 0.32
SMTN-218ENST00000489337 FHOD3Q2V2M9 1422 aa17■□□□□ 0.31
SMTN-218ENST00000489337 ZNF608Q9ULD9 1512 aaPredicted RBP16.97■□□□□ 0.31
SMTN-218ENST00000489337 KIF21AQ7Z4S6 1674 aa16.96■□□□□ 0.3
SMTN-218ENST00000489337 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
SMTN-218ENST00000489337 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
SMTN-218ENST00000489337 PRXQ9BXM0 1461 aa16.92■□□□□ 0.3
SMTN-218ENST00000489337 CHIC2Q9UKJ5 165 aa16.92■□□□□ 0.3
SMTN-218ENST00000489337 BIVM-ERCC5R4GMW8 1640 aa16.9■□□□□ 0.3
SMTN-218ENST00000489337 VPS8Q8N3P4 1428 aa16.9■□□□□ 0.3
SMTN-218ENST00000489337 ZNF777Q9ULD5 760 aaPredicted RBP16.89■□□□□ 0.3
SMTN-218ENST00000489337 DNMBPQ6XZF7 1577 aa16.88■□□□□ 0.29
SMTN-218ENST00000489337 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
SMTN-218ENST00000489337 KIF21BO75037 1637 aa16.87■□□□□ 0.29
SMTN-218ENST00000489337 ARHGAP35Q9NRY4 1499 aa16.83■□□□□ 0.28
SMTN-218ENST00000489337 BCANQ96GW7 911 aa16.82■□□□□ 0.28
SMTN-218ENST00000489337 MRC2Q9UBG0 1479 aa16.81■□□□□ 0.28
SMTN-218ENST00000489337 MTUS2Q5JR59 1369 aa16.77■□□□□ 0.27
SMTN-218ENST00000489337 ABCA10Q8WWZ4 1543 aa16.77■□□□□ 0.27
SMTN-218ENST00000489337 KCNH8Q96L42 1107 aa16.76■□□□□ 0.27
SMTN-218ENST00000489337 RRP7BPQ9NSQ0 103 aa16.74■□□□□ 0.27
SMTN-218ENST00000489337 JPH4Q96JJ6 628 aa16.72■□□□□ 0.27
SMTN-218ENST00000489337 SNAPC4Q5SXM2 1469 aa16.71■□□□□ 0.27
SMTN-218ENST00000489337 FKBP8Q14318 412 aa16.7■□□□□ 0.26
SMTN-218ENST00000489337 TRIM52Q96A61 297 aa16.68■□□□□ 0.26
SMTN-218ENST00000489337 MYT1LQ9UL68 1186 aa16.66■□□□□ 0.26
SMTN-218ENST00000489337 ERICH3Q5RHP9 1530 aa16.66■□□□□ 0.26
SMTN-218ENST00000489337 HIRIP3Q9BW71 556 aaPredicted RBP16.66■□□□□ 0.26
SMTN-218ENST00000489337 RBM19Q9Y4C8 960 aaKnown RBP16.65■□□□□ 0.26
SMTN-218ENST00000489337 PRDM2Q13029 1718 aa16.65■□□□□ 0.26
SMTN-218ENST00000489337 GRIN2BQ13224 1484 aa16.62■□□□□ 0.25
SMTN-218ENST00000489337 NEFLP07196 543 aa16.62■□□□□ 0.25
SMTN-218ENST00000489337 CNGB1Q14028 1251 aaPredicted RBP16.61■□□□□ 0.25
SMTN-218ENST00000489337 SIN3AQ96ST3 1273 aa16.61■□□□□ 0.25
SMTN-218ENST00000489337 PHLDB1Q86UU1 1377 aa16.61■□□□□ 0.25
SMTN-218ENST00000489337 ZNF644Q9H582 1327 aaPredicted RBP16.6■□□□□ 0.25
SMTN-218ENST00000489337 DHX57Q6P158 1386 aaKnown RBP16.59■□□□□ 0.25
SMTN-218ENST00000489337 CCNB3Q8WWL7 1395 aa16.58■□□□□ 0.25
SMTN-218ENST00000489337 FHAD1B1AJZ9 1412 aa16.58■□□□□ 0.25
SMTN-218ENST00000489337 IFT140Q96RY7 1462 aa16.57■□□□□ 0.24
SMTN-218ENST00000489337 FOXD1Q16676 465 aa16.57■□□□□ 0.24
SMTN-218ENST00000489337 TARBP1Q13395 1621 aaKnown RBP16.52■□□□□ 0.23
SMTN-218ENST00000489337 CDK13Q14004 1512 aaKnown RBP16.5■□□□□ 0.23
SMTN-218ENST00000489337 PCF11O94913 1555 aaKnown RBP16.5■□□□□ 0.23
SMTN-218ENST00000489337 ERICH6Q7L0X2 663 aa16.5■□□□□ 0.23
SMTN-218ENST00000489337 SENP3Q9H4L4 574 aaPredicted RBP16.5■□□□□ 0.23
SMTN-218ENST00000489337 PLEKHD1A6NEE1 506 aa16.48■□□□□ 0.23
SMTN-218ENST00000489337 ZNF326Q5BKZ1 582 aaKnown RBP16.48■□□□□ 0.23
SMTN-218ENST00000489337 FMN1Q68DA7 1419 aa16.48■□□□□ 0.23
SMTN-218ENST00000489337 CFDP1Q9UEE9 299 aaPredicted RBP16.48■□□□□ 0.23
SMTN-218ENST00000489337 EIF4G3O43432 1585 aaKnown RBP16.48■□□□□ 0.23
SMTN-218ENST00000489337 CDK11AQ9UQ88 783 aaPredicted RBP16.47■□□□□ 0.23
SMTN-218ENST00000489337 PLB1Q6P1J6 1458 aa16.46■□□□□ 0.23
SMTN-218ENST00000489337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.46■□□□□ 0.221e-7■□□□□ 10.9
SMTN-218ENST00000489337 MSH5O43196 834 aa16.45■□□□□ 0.22
SMTN-218ENST00000489337 DDX10Q13206 875 aaKnown RBP16.45■□□□□ 0.22
SMTN-218ENST00000489337 LRRC9Q6ZRR7 1453 aa16.45■□□□□ 0.22
SMTN-218ENST00000489337 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
SMTN-218ENST00000489337 GRIN2AQ12879 1464 aa16.45■□□□□ 0.22
SMTN-218ENST00000489337 RAB3GAP2Q9H2M9 1393 aa16.44■□□□□ 0.22
SMTN-218ENST00000489337 WDR62O43379 1518 aa16.44■□□□□ 0.22
SMTN-218ENST00000489337 POLR3GLQ9BT43 218 aa16.42■□□□□ 0.22
SMTN-218ENST00000489337 PRG4Q92954 1404 aaPredicted RBP16.41■□□□□ 0.22
SMTN-218ENST00000489337 HNRNPMP52272 730 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMTN-218ENST00000489337 CUL7Q14999 1698 aa16.4■□□□□ 0.22
SMTN-218ENST00000489337 PRKCSHP14314 528 aaPredicted RBP16.4■□□□□ 0.22
SMTN-218ENST00000489337 IQGAP2Q13576 1575 aa16.39■□□□□ 0.21
SMTN-218ENST00000489337 PBRM1Q86U86 1689 aa16.38■□□□□ 0.21
SMTN-218ENST00000489337 CYB5RLQ6IPT4 315 aa16.38■□□□□ 0.21
SMTN-218ENST00000489337 PTPRGP23470 1445 aa16.37■□□□□ 0.21
SMTN-218ENST00000489337 CASKIN1Q8WXD9 1431 aa16.37■□□□□ 0.21
SMTN-218ENST00000489337 TIAM1Q13009 1591 aa16.37■□□□□ 0.21
SMTN-218ENST00000489337 THOC2Q8NI27 1593 aaKnown RBP16.36■□□□□ 0.21
SMTN-218ENST00000489337 CARMIL2Q6F5E8 1435 aa16.36■□□□□ 0.21
SMTN-218ENST00000489337 ADAMTS12P58397 1594 aa16.35■□□□□ 0.21
SMTN-218ENST00000489337 SYNJ2O15056 1496 aa16.35■□□□□ 0.21
SMTN-218ENST00000489337 KIAA0586Q9BVV6 1533 aa16.33■□□□□ 0.2
SMTN-218ENST00000489337 NCOA2Q15596 1464 aa16.32■□□□□ 0.2
SMTN-218ENST00000489337 FANCIQ9NVI1 1328 aa16.32■□□□□ 0.2
SMTN-218ENST00000489337 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
SMTN-218ENST00000489337 CTTNBP2Q8WZ74 1663 aa16.31■□□□□ 0.2
SMTN-218ENST00000489337 ANP32CO43423 234 aa16.3■□□□□ 0.2
SMTN-218ENST00000489337 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
SMTN-218ENST00000489337 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
SMTN-218ENST00000489337 SLC4A1APQ9BWU0 796 aaKnown RBP16.28■□□□□ 0.2
SMTN-218ENST00000489337 FYCO1Q9BQS8 1478 aa16.28■□□□□ 0.2
SMTN-218ENST00000489337 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
SMTN-218ENST00000489337 EPRSP07814 1512 aaKnown RBP16.27■□□□□ 0.2
SMTN-218ENST00000489337 CEP170Q5SW79 1584 aa16.27■□□□□ 0.2
SMTN-218ENST00000489337 SETD5Q9C0A6 1442 aa16.26■□□□□ 0.19
SMTN-218ENST00000489337 TSPY4P0CV99 314 aa16.26■□□□□ 0.19
SMTN-218ENST00000489337 TSPY10P0CW01 314 aa16.26■□□□□ 0.19
SMTN-218ENST00000489337 KDM2AQ9Y2K7 1162 aa16.26■□□□□ 0.19
SMTN-218ENST00000489337 MAGI1Q96QZ7 1491 aaPredicted RBP16.26■□□□□ 0.19
SMTN-218ENST00000489337 IRX6P78412 446 aaPredicted RBP16.26■□□□□ 0.19
SMTN-218ENST00000489337 NPM1P06748 294 aaKnown RBP eCLIP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms