RNA–Protein interactions for RNA: ENST00000489093.1

BRD9-207, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-207ENST00000489093 SHROOM2Q13796 1616 aa23.62■■□□□ 1.37
BRD9-207ENST00000489093 PRG4Q92954 1404 aaPredicted RBP23.53■■□□□ 1.36
BRD9-207ENST00000489093 JPH4Q96JJ6 628 aa23.52■■□□□ 1.36
BRD9-207ENST00000489093 KIAA0586Q9BVV6 1533 aa23.5■■□□□ 1.35
BRD9-207ENST00000489093 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
BRD9-207ENST00000489093 RAPGEF2Q9Y4G8 1499 aa23.47■■□□□ 1.35
BRD9-207ENST00000489093 IQGAP2Q13576 1575 aa23.38■■□□□ 1.33
BRD9-207ENST00000489093 PRXQ9BXM0 1461 aa23.37■■□□□ 1.33
BRD9-207ENST00000489093 FAM9AQ8IZU1 332 aaPredicted RBP23.31■■□□□ 1.32
BRD9-207ENST00000489093 CSRNP3Q8WYN3 585 aa23.3■■□□□ 1.32
BRD9-207ENST00000489093 TRHP20396 242 aaPredicted RBP23.28■■□□□ 1.32
BRD9-207ENST00000489093 TTBK1Q5TCY1 1321 aaPredicted RBP23.27■■□□□ 1.32
BRD9-207ENST00000489093 DISP1Q96F81 1524 aa23.26■■□□□ 1.31
BRD9-207ENST00000489093 CTTNBP2Q8WZ74 1663 aa23.25■■□□□ 1.31
BRD9-207ENST00000489093 EEA1Q15075 1411 aa23.25■■□□□ 1.31
BRD9-207ENST00000489093 UGGT2Q9NYU1 1516 aa23.24■■□□□ 1.31
BRD9-207ENST00000489093 CARMIL2Q6F5E8 1435 aa23.23■■□□□ 1.31
BRD9-207ENST00000489093 ADCY10Q96PN6 1610 aa23.21■■□□□ 1.31
BRD9-207ENST00000489093 PTPRGP23470 1445 aa23.2■■□□□ 1.3
BRD9-207ENST00000489093 TNIKQ9UKE5 1360 aa23.2■■□□□ 1.3
BRD9-207ENST00000489093 KIAA0556O60303 1618 aa23.18■■□□□ 1.3
BRD9-207ENST00000489093 EHMT2Q96KQ7 1210 aa23.08■■□□□ 1.29
BRD9-207ENST00000489093 KIF21BO75037 1637 aa23.08■■□□□ 1.28
BRD9-207ENST00000489093 GOLGA3Q08378 1498 aa23.05■■□□□ 1.28
BRD9-207ENST00000489093 NPM1P06748 294 aaKnown RBP eCLIP23.05■■□□□ 1.28
BRD9-207ENST00000489093 UACAQ9BZF9 1416 aa23.04■■□□□ 1.28
BRD9-207ENST00000489093 MAPKBP1O60336 1514 aa23.03■■□□□ 1.28
BRD9-207ENST00000489093 P3H3Q8IVL6 736 aa23.02■■□□□ 1.28
BRD9-207ENST00000489093 ABCC2Q92887 1545 aa23.02■■□□□ 1.28
BRD9-207ENST00000489093 UHRF1BP1LA0JNW5 1464 aa23.01■■□□□ 1.27
BRD9-207ENST00000489093 RANGAP1P46060 587 aaPredicted RBP23.01■■□□□ 1.27
BRD9-207ENST00000489093 PLB1Q6P1J6 1458 aa22.99■■□□□ 1.27
BRD9-207ENST00000489093 KIF13AQ9H1H9 1805 aa22.98■■□□□ 1.27
BRD9-207ENST00000489093 SAMD9Q5K651 1589 aa22.97■■□□□ 1.27
BRD9-207ENST00000489093 ABCC10Q5T3U5 1492 aa22.95■■□□□ 1.26
BRD9-207ENST00000489093 DIP2BQ9P265 1576 aa22.94■■□□□ 1.26
BRD9-207ENST00000489093 ABCA8O94911 1581 aa22.93■■□□□ 1.26
BRD9-207ENST00000489093 FAM69CQ0P6D2 419 aa22.92■■□□□ 1.26
BRD9-207ENST00000489093 KDM5BQ9UGL1 1544 aa22.92■■□□□ 1.26
BRD9-207ENST00000489093 ASXL2Q76L83 1435 aa22.91■■□□□ 1.26
BRD9-207ENST00000489093 ZCCHC11Q5TAX3 1644 aaKnown RBP22.9■■□□□ 1.26
BRD9-207ENST00000489093 UBTFP17480 764 aaKnown RBP22.89■■□□□ 1.25
BRD9-207ENST00000489093 FHOD3Q2V2M9 1422 aa22.89■■□□□ 1.25
BRD9-207ENST00000489093 ARID3CA6NKF2 412 aa22.85■■□□□ 1.25
BRD9-207ENST00000489093 EFCAB5A4FU69 1503 aa22.8■■□□□ 1.24
BRD9-207ENST00000489093 RAPGEF6Q8TEU7 1601 aa22.77■■□□□ 1.24
BRD9-207ENST00000489093 EPRSP07814 1512 aaKnown RBP22.77■■□□□ 1.24
BRD9-207ENST00000489093 WDR7Q9Y4E6 1490 aa22.76■■□□□ 1.23
BRD9-207ENST00000489093 TSPOAP1O95153 1857 aa22.75■■□□□ 1.23
BRD9-207ENST00000489093 GLI2P10070 1586 aa22.74■■□□□ 1.23
BRD9-207ENST00000489093 ATP10BO94823 1461 aa22.73■■□□□ 1.23
BRD9-207ENST00000489093 ARHGAP35Q9NRY4 1499 aa22.73■■□□□ 1.23
BRD9-207ENST00000489093 NUP153P49790 1475 aaKnown RBP22.72■■□□□ 1.23
BRD9-207ENST00000489093 PPRC1Q5VV67 1664 aaKnown RBP22.68■■□□□ 1.22
BRD9-207ENST00000489093 KCNH8Q96L42 1107 aa22.67■■□□□ 1.22
BRD9-207ENST00000489093 MAP3K4Q9Y6R4 1608 aa22.65■■□□□ 1.22
BRD9-207ENST00000489093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
BRD9-207ENST00000489093 HNRNPUL2Q1KMD3 747 aaKnown RBP22.62■■□□□ 1.21
BRD9-207ENST00000489093 CDK13Q14004 1512 aaKnown RBP22.59■■□□□ 1.21
BRD9-207ENST00000489093 KDM6BO15054 1643 aa22.59■■□□□ 1.21
BRD9-207ENST00000489093 FMN1Q68DA7 1419 aa22.57■■□□□ 1.2
BRD9-207ENST00000489093 ATP1B4Q9UN42 357 aaPredicted RBP22.55■■□□□ 1.2
BRD9-207ENST00000489093 CD109Q6YHK3 1445 aa22.55■■□□□ 1.2
BRD9-207ENST00000489093 CFAP43Q8NDM7 1665 aa22.54■■□□□ 1.2
BRD9-207ENST00000489093 CLIP1P30622 1438 aa22.54■■□□□ 1.2
BRD9-207ENST00000489093 HECW1Q76N89 1606 aa22.53■■□□□ 1.2
BRD9-207ENST00000489093 TEX14Q8IWB6 1497 aa22.51■■□□□ 1.19
BRD9-207ENST00000489093 COL17A1Q9UMD9 1497 aaPredicted RBP22.51■■□□□ 1.19
BRD9-207ENST00000489093 MAGI3Q5TCQ9 1506 aa22.49■■□□□ 1.19
BRD9-207ENST00000489093 PCF11O94913 1555 aaKnown RBP22.49■■□□□ 1.19
BRD9-207ENST00000489093 ABCA9Q8IUA7 1624 aa22.49■■□□□ 1.19
BRD9-207ENST00000489093 LOC105371045A0A1W2PR82 267 aa22.47■■□□□ 1.19
BRD9-207ENST00000489093 PLEKHD1A6NEE1 506 aa22.47■■□□□ 1.19
BRD9-207ENST00000489093 LRRIQ1Q96JM4 1722 aa22.45■■□□□ 1.19
BRD9-207ENST00000489093 CEP162Q5TB80 1403 aa22.43■■□□□ 1.18
BRD9-207ENST00000489093 CASKIN1Q8WXD9 1431 aa22.42■■□□□ 1.18
BRD9-207ENST00000489093 TTC37Q6PGP7 1564 aa22.41■■□□□ 1.18
BRD9-207ENST00000489093 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.4■■□□□ 1.18
BRD9-207ENST00000489093 FYCO1Q9BQS8 1478 aa22.36■■□□□ 1.17
BRD9-207ENST00000489093 KIF14Q15058 1648 aa22.35■■□□□ 1.17
BRD9-207ENST00000489093 TROQ12816 1431 aaPredicted RBP22.32■■□□□ 1.16
BRD9-207ENST00000489093 CCDC18Q5T9S5 1454 aa22.32■■□□□ 1.16
BRD9-207ENST00000489093 CDK11AQ9UQ88 783 aaPredicted RBP22.3■■□□□ 1.16
BRD9-207ENST00000489093 ARAP3Q8WWN8 1544 aa22.3■■□□□ 1.16
BRD9-207ENST00000489093 NEO1Q92859 1461 aa22.29■■□□□ 1.16
BRD9-207ENST00000489093 FANCAO15360 1455 aa22.27■■□□□ 1.16
BRD9-207ENST00000489093 RAPGEF3O95398 923 aa22.25■■□□□ 1.15
BRD9-207ENST00000489093 FRMPD1Q5SYB0 1578 aa22.24■■□□□ 1.15
BRD9-207ENST00000489093 PHLDB1Q86UU1 1377 aa22.23■■□□□ 1.15
BRD9-207ENST00000489093 PLCH2O75038 1416 aa22.23■■□□□ 1.15
BRD9-207ENST00000489093 AKNAQ7Z591 1439 aa22.23■■□□□ 1.15
BRD9-207ENST00000489093 MYO5CQ9NQX4 1742 aa22.2■■□□□ 1.14
BRD9-207ENST00000489093 CFAP74Q9C0B2 1584 aa22.2■■□□□ 1.14
BRD9-207ENST00000489093 KDM4FA0A1W2PPD8 638 aa22.17■■□□□ 1.14
BRD9-207ENST00000489093 DENND4BO75064 1496 aaPredicted RBP22.16■■□□□ 1.14
BRD9-207ENST00000489093 ARHGAP5Q13017 1502 aa22.16■■□□□ 1.14
BRD9-207ENST00000489093 ADGRL1O94910 1474 aa22.15■■□□□ 1.14
BRD9-207ENST00000489093 RICTORQ6R327 1708 aa22.14■■□□□ 1.14
BRD9-207ENST00000489093 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.13
BRD9-207ENST00000489093 EFCAB2Q5VUJ9 269 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms