RNA–Protein interactions for RNA: ENST00000489093.1

BRD9-207, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-207ENST00000489093 NISCHQ9Y2I1 1504 aa33.96■■■■□ 3.03
BRD9-207ENST00000489093 CCDC180Q9P1Z9 1646 aa30.19■■■□□ 2.42
BRD9-207ENST00000489093 ABCC9O60706 1549 aa29.79■■■□□ 2.36
BRD9-207ENST00000489093 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
BRD9-207ENST00000489093 DCAF8L2P0C7V8 631 aa28.47■■■□□ 2.15
BRD9-207ENST00000489093 NACADO15069 1562 aa28.41■■■□□ 2.14
BRD9-207ENST00000489093 ZCCHC6Q5VYS8 1495 aaKnown RBP28.28■■■□□ 2.12
BRD9-207ENST00000489093 MYO15BQ96JP2 1530 aa28.16■■■□□ 2.1
BRD9-207ENST00000489093 DCAF1Q9Y4B6 1507 aa28.02■■■□□ 2.08
BRD9-207ENST00000489093 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.06
BRD9-207ENST00000489093 PABPN1Q86U42 306 aaKnown RBP eCLIP27.84■■■□□ 2.05
BRD9-207ENST00000489093 BICRAQ9NZM4 1560 aa27.71■■■□□ 2.03
BRD9-207ENST00000489093 SCRIBQ14160 1630 aa27.67■■■□□ 2.02
BRD9-207ENST00000489093 DNAJC5BQ9UF47 199 aa27.48■■□□□ 1.99
BRD9-207ENST00000489093 SHROOM4Q9ULL8 1493 aa27.26■■□□□ 1.95
BRD9-207ENST00000489093 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
BRD9-207ENST00000489093 CC2D2AQ9P2K1 1620 aa26.89■■□□□ 1.9
BRD9-207ENST00000489093 CECR2Q9BXF3 1484 aa26.74■■□□□ 1.87
BRD9-207ENST00000489093 SMARCA4P51532 1647 aa26.39■■□□□ 1.82
BRD9-207ENST00000489093 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
BRD9-207ENST00000489093 ATAD2BQ9ULI0 1458 aa26.28■■□□□ 1.8
BRD9-207ENST00000489093 NCAPD3P42695 1498 aa26.23■■□□□ 1.79
BRD9-207ENST00000489093 MROH2BQ7Z745 1585 aa26.23■■□□□ 1.79
BRD9-207ENST00000489093 SMARCA2P51531 1590 aa26.19■■□□□ 1.78
BRD9-207ENST00000489093 HMGXB3Q12766 1538 aa26.1■■□□□ 1.77
BRD9-207ENST00000489093 PEG3Q9GZU2 1588 aa26.08■■□□□ 1.77
BRD9-207ENST00000489093 BAZ1BQ9UIG0 1483 aaKnown RBP26.04■■□□□ 1.76
BRD9-207ENST00000489093 WIZO95785 1651 aa25.93■■□□□ 1.74
BRD9-207ENST00000489093 RSF1Q96T23 1441 aaPredicted RBP25.86■■□□□ 1.73
BRD9-207ENST00000489093 NESP48681 1621 aa25.77■■□□□ 1.72
BRD9-207ENST00000489093 ERCC6Q03468 1493 aa25.63■■□□□ 1.69
BRD9-207ENST00000489093 TOP2AP11388 1531 aaKnown RBP25.62■■□□□ 1.69
BRD9-207ENST00000489093 LAMC3Q9Y6N6 1575 aa25.55■■□□□ 1.68
BRD9-207ENST00000489093 CADPSQ9ULU8 1353 aa25.48■■□□□ 1.67
BRD9-207ENST00000489093 KIF21AQ7Z4S6 1674 aa25.4■■□□□ 1.66
BRD9-207ENST00000489093 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
BRD9-207ENST00000489093 THOC2Q8NI27 1593 aaKnown RBP25.35■■□□□ 1.65
BRD9-207ENST00000489093 CUX2O14529 1486 aa25.34■■□□□ 1.65
BRD9-207ENST00000489093 CCDC88BA6NC98 1476 aa25.34■■□□□ 1.65
BRD9-207ENST00000489093 DNAJC5Q9H3Z4 198 aa25.32■■□□□ 1.64
BRD9-207ENST00000489093 CFTRP13569 1480 aa25.31■■□□□ 1.64
BRD9-207ENST00000489093 FANCD2Q9BXW9 1451 aa25.22■■□□□ 1.63
BRD9-207ENST00000489093 MRC2Q9UBG0 1479 aa25.18■■□□□ 1.62
BRD9-207ENST00000489093 CEP164Q9UPV0 1460 aa25.18■■□□□ 1.62
BRD9-207ENST00000489093 SUPT5HO00267 1087 aaKnown RBP25.16■■□□□ 1.62
BRD9-207ENST00000489093 WDR62O43379 1518 aa25.1■■□□□ 1.61
BRD9-207ENST00000489093 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
BRD9-207ENST00000489093 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
BRD9-207ENST00000489093 TOPBP1Q92547 1522 aa24.81■■□□□ 1.56
BRD9-207ENST00000489093 DNMBPQ6XZF7 1577 aa24.75■■□□□ 1.55
BRD9-207ENST00000489093 ABCC8Q09428 1581 aa24.68■■□□□ 1.54
BRD9-207ENST00000489093 IFT140Q96RY7 1462 aa24.64■■□□□ 1.54
BRD9-207ENST00000489093 ZNF608Q9ULD9 1512 aaPredicted RBP24.63■■□□□ 1.53
BRD9-207ENST00000489093 CUX1P39880 1505 aa24.61■■□□□ 1.53
BRD9-207ENST00000489093 POLA1P09884 1462 aaPredicted RBP24.6■■□□□ 1.53
BRD9-207ENST00000489093 TARBP1Q13395 1621 aaKnown RBP24.55■■□□□ 1.52
BRD9-207ENST00000489093 RAD54L2Q9Y4B4 1467 aa24.54■■□□□ 1.52
BRD9-207ENST00000489093 FGD5Q6ZNL6 1462 aa24.53■■□□□ 1.52
BRD9-207ENST00000489093 EIF4G3O43432 1585 aaKnown RBP24.5■■□□□ 1.51
BRD9-207ENST00000489093 AQRO60306 1485 aaKnown RBP eCLIP24.46■■□□□ 1.514e-8■■■■■ 42.5
BRD9-207ENST00000489093 SOGA1O94964 1423 aa24.46■■□□□ 1.51
BRD9-207ENST00000489093 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
BRD9-207ENST00000489093 TDRD9Q8NDG6 1382 aaKnown RBP24.4■■□□□ 1.5
BRD9-207ENST00000489093 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
BRD9-207ENST00000489093 WRNQ14191 1432 aaPredicted RBP eCLIP24.36■■□□□ 1.49
BRD9-207ENST00000489093 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
BRD9-207ENST00000489093 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
BRD9-207ENST00000489093 BIVM-ERCC5R4GMW8 1640 aa24.31■■□□□ 1.48
BRD9-207ENST00000489093 OSCARQ8IYS5 282 aa24.28■■□□□ 1.48
BRD9-207ENST00000489093 ABCA10Q8WWZ4 1543 aa24.24■■□□□ 1.47
BRD9-207ENST00000489093 SNAPC4Q5SXM2 1469 aa24.22■■□□□ 1.47
BRD9-207ENST00000489093 CHD1O14646 1710 aa24.2■■□□□ 1.46
BRD9-207ENST00000489093 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
BRD9-207ENST00000489093 GAPVD1Q14C86 1478 aa24.19■■□□□ 1.46
BRD9-207ENST00000489093 ABCA5Q8WWZ7 1642 aa24.18■■□□□ 1.46
BRD9-207ENST00000489093 FBLN2P98095 1184 aa24.17■■□□□ 1.46
BRD9-207ENST00000489093 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
BRD9-207ENST00000489093 MAGI1Q96QZ7 1491 aaPredicted RBP24.12■■□□□ 1.45
BRD9-207ENST00000489093 SYNJ2O15056 1496 aa24.05■■□□□ 1.44
BRD9-207ENST00000489093 CHMP7Q8WUX9 453 aaPredicted RBP24.04■■□□□ 1.44
BRD9-207ENST00000489093 ADAMTS12P58397 1594 aa23.98■■□□□ 1.43
BRD9-207ENST00000489093 RIMBP3CA6NJZ7 1639 aa23.97■■□□□ 1.43
BRD9-207ENST00000489093 RIMBP3BA6NNM3 1639 aa23.97■■□□□ 1.43
BRD9-207ENST00000489093 RIMBP3Q9UFD9 1639 aa23.97■■□□□ 1.43
BRD9-207ENST00000489093 TRIM41Q8WV44 630 aa23.96■■□□□ 1.43
BRD9-207ENST00000489093 ARHGEF11O15085 1522 aa23.95■■□□□ 1.43
BRD9-207ENST00000489093 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
BRD9-207ENST00000489093 ERICH3Q5RHP9 1530 aa23.93■■□□□ 1.42
BRD9-207ENST00000489093 GRIN2AQ12879 1464 aa23.9■■□□□ 1.42
BRD9-207ENST00000489093 FHAD1B1AJZ9 1412 aa23.88■■□□□ 1.41
BRD9-207ENST00000489093 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
BRD9-207ENST00000489093 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
BRD9-207ENST00000489093 NUP160Q12769 1436 aa23.79■■□□□ 1.4
BRD9-207ENST00000489093 IGF1RP08069 1367 aa23.78■■□□□ 1.4
BRD9-207ENST00000489093 ARAP1Q96P48 1450 aa23.78■■□□□ 1.4
BRD9-207ENST00000489093 CYB5RLQ6IPT4 315 aa23.73■■□□□ 1.39
BRD9-207ENST00000489093 RUSC2Q8N2Y8 1516 aa23.7■■□□□ 1.38
BRD9-207ENST00000489093 CUL7Q14999 1698 aa23.68■■□□□ 1.38
BRD9-207ENST00000489093 ERCC6L2Q5T890 1561 aa23.67■■□□□ 1.38
BRD9-207ENST00000489093 CARMIL1Q5VZK9 1371 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms