RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 TRIM26Q12899 539 aaPredicted RBP21.39■■□□□ 1.02
COPS7B-221ENST00000488111 CHMP7Q8WUX9 453 aaPredicted RBP21.39■■□□□ 1.02
COPS7B-221ENST00000488111 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
COPS7B-221ENST00000488111 SYNJ2O15056 1496 aa21.33■■□□□ 1.01
COPS7B-221ENST00000488111 CLIP1P30622 1438 aa21.33■■□□□ 1.01
COPS7B-221ENST00000488111 GRIN2AQ12879 1464 aa21.31■■□□□ 1
COPS7B-221ENST00000488111 ZEB1P37275 1124 aaPredicted RBP21.28■■□□□ 1
COPS7B-221ENST00000488111 SCAF1Q9H7N4 1312 aaKnown RBP21.25■□□□□ 0.99
COPS7B-221ENST00000488111 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
COPS7B-221ENST00000488111 CTTNBP2Q8WZ74 1663 aa21.22■□□□□ 0.99
COPS7B-221ENST00000488111 ARHGAP35Q9NRY4 1499 aa21.19■□□□□ 0.98
COPS7B-221ENST00000488111 CEP170Q5SW79 1584 aa21.18■□□□□ 0.98
COPS7B-221ENST00000488111 KIAA0586Q9BVV6 1533 aa21.15■□□□□ 0.98
COPS7B-221ENST00000488111 ARAP1Q96P48 1450 aa21.15■□□□□ 0.98
COPS7B-221ENST00000488111 CHD1O14646 1710 aa21.15■□□□□ 0.98
COPS7B-221ENST00000488111 NUP160Q12769 1436 aa21.15■□□□□ 0.98
COPS7B-221ENST00000488111 IQGAP2Q13576 1575 aa21.14■□□□□ 0.97
COPS7B-221ENST00000488111 FHOD3Q2V2M9 1422 aa21.09■□□□□ 0.97
COPS7B-221ENST00000488111 VPS8Q8N3P4 1428 aa21.08■□□□□ 0.96
COPS7B-221ENST00000488111 JPH4Q96JJ6 628 aa21.08■□□□□ 0.96
COPS7B-221ENST00000488111 EFCAB5A4FU69 1503 aa21.05■□□□□ 0.96
COPS7B-221ENST00000488111 TTBK1Q5TCY1 1321 aaPredicted RBP21.04■□□□□ 0.96
COPS7B-221ENST00000488111 UGGT2Q9NYU1 1516 aa21.02■□□□□ 0.96
COPS7B-221ENST00000488111 SAMD9Q5K651 1589 aa21.02■□□□□ 0.96
COPS7B-221ENST00000488111 DISP1Q96F81 1524 aa20.98■□□□□ 0.95
COPS7B-221ENST00000488111 ATP1B4Q9UN42 357 aaPredicted RBP20.98■□□□□ 0.95
COPS7B-221ENST00000488111 MYT1Q01538 1121 aa20.97■□□□□ 0.95
COPS7B-221ENST00000488111 OSCARQ8IYS5 282 aa20.94■□□□□ 0.94
COPS7B-221ENST00000488111 PRG4Q92954 1404 aaPredicted RBP20.93■□□□□ 0.94
COPS7B-221ENST00000488111 APLP2Q06481 763 aa20.93■□□□□ 0.94
COPS7B-221ENST00000488111 KIAA0556O60303 1618 aa20.93■□□□□ 0.94
COPS7B-221ENST00000488111 CARMIL2Q6F5E8 1435 aa20.91■□□□□ 0.94
COPS7B-221ENST00000488111 FMN1Q68DA7 1419 aa20.91■□□□□ 0.94
COPS7B-221ENST00000488111 CLASP1Q7Z460 1538 aa20.9■□□□□ 0.94
COPS7B-221ENST00000488111 PCF11O94913 1555 aaKnown RBP20.86■□□□□ 0.93
COPS7B-221ENST00000488111 CASKIN1Q8WXD9 1431 aa20.84■□□□□ 0.93
COPS7B-221ENST00000488111 SHROOM2Q13796 1616 aa20.84■□□□□ 0.93
COPS7B-221ENST00000488111 ERCC6L2Q5T890 1561 aa20.83■□□□□ 0.93
COPS7B-221ENST00000488111 ARID3CA6NKF2 412 aa20.82■□□□□ 0.92
COPS7B-221ENST00000488111 KANK4Q5T7N3 995 aaPredicted RBP20.82■□□□□ 0.92
COPS7B-221ENST00000488111 FYCO1Q9BQS8 1478 aa20.8■□□□□ 0.92
COPS7B-221ENST00000488111 ACIN1Q9UKV3 1341 aaKnown RBP20.79■□□□□ 0.92
COPS7B-221ENST00000488111 PTPRGP23470 1445 aa20.77■□□□□ 0.92
COPS7B-221ENST00000488111 PLB1Q6P1J6 1458 aa20.76■□□□□ 0.91
COPS7B-221ENST00000488111 TIAM1Q13009 1591 aa20.72■□□□□ 0.91
COPS7B-221ENST00000488111 RAPGEF6Q8TEU7 1601 aa20.69■□□□□ 0.9
COPS7B-221ENST00000488111 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.69■□□□□ 0.9
COPS7B-221ENST00000488111 HNRNPUL2Q1KMD3 747 aaKnown RBP20.69■□□□□ 0.9
COPS7B-221ENST00000488111 HECW1Q76N89 1606 aa20.69■□□□□ 0.9
COPS7B-221ENST00000488111 LRRIQ1Q96JM4 1722 aa20.68■□□□□ 0.9
COPS7B-221ENST00000488111 NUP153P49790 1475 aaKnown RBP20.68■□□□□ 0.9
COPS7B-221ENST00000488111 EPRSP07814 1512 aaKnown RBP20.67■□□□□ 0.9
COPS7B-221ENST00000488111 MAP3K1Q13233 1512 aa20.67■□□□□ 0.9
COPS7B-221ENST00000488111 NEUROD1Q13562 356 aa20.67■□□□□ 0.9
COPS7B-221ENST00000488111 CDK13Q14004 1512 aaKnown RBP20.66■□□□□ 0.9
COPS7B-221ENST00000488111 LRRC9Q6ZRR7 1453 aa20.65■□□□□ 0.9
COPS7B-221ENST00000488111 ABCA8O94911 1581 aa20.64■□□□□ 0.9
COPS7B-221ENST00000488111 CFAP43Q8NDM7 1665 aa20.64■□□□□ 0.89
COPS7B-221ENST00000488111 UACAQ9BZF9 1416 aa20.63■□□□□ 0.89
COPS7B-221ENST00000488111 CCDC18Q5T9S5 1454 aa20.62■□□□□ 0.89
COPS7B-221ENST00000488111 MTUS2Q5JR59 1369 aa20.61■□□□□ 0.89
COPS7B-221ENST00000488111 MAGI3Q5TCQ9 1506 aa20.57■□□□□ 0.88
COPS7B-221ENST00000488111 ATP10BO94823 1461 aa20.56■□□□□ 0.88
COPS7B-221ENST00000488111 ARHGEF11O15085 1522 aa20.53■□□□□ 0.88
COPS7B-221ENST00000488111 CDK11AQ9UQ88 783 aaPredicted RBP20.53■□□□□ 0.88
COPS7B-221ENST00000488111 GTF3C3Q9Y5Q9 886 aa20.53■□□□□ 0.88
COPS7B-221ENST00000488111 ABCC2Q92887 1545 aa20.53■□□□□ 0.88
COPS7B-221ENST00000488111 CENPBP07199 599 aaPredicted RBP20.51■□□□□ 0.87
COPS7B-221ENST00000488111 PHLDB1Q86UU1 1377 aa20.51■□□□□ 0.87
COPS7B-221ENST00000488111 PLEKHD1A6NEE1 506 aa20.49■□□□□ 0.87
COPS7B-221ENST00000488111 EHBP1L1Q8N3D4 1523 aa20.49■□□□□ 0.87
COPS7B-221ENST00000488111 CYB5RLQ6IPT4 315 aa20.47■□□□□ 0.87
COPS7B-221ENST00000488111 UHRF1BP1LA0JNW5 1464 aa20.47■□□□□ 0.87
COPS7B-221ENST00000488111 NCOA2Q15596 1464 aa20.46■□□□□ 0.87
COPS7B-221ENST00000488111 TROQ12816 1431 aaPredicted RBP20.44■□□□□ 0.86
COPS7B-221ENST00000488111 ADCY10Q96PN6 1610 aa20.44■□□□□ 0.86
COPS7B-221ENST00000488111 RIMBP3CA6NJZ7 1639 aa20.44■□□□□ 0.86
COPS7B-221ENST00000488111 RIMBP3BA6NNM3 1639 aa20.44■□□□□ 0.86
COPS7B-221ENST00000488111 RIMBP3Q9UFD9 1639 aa20.44■□□□□ 0.86
COPS7B-221ENST00000488111 SUPT6HQ7KZ85 1726 aaKnown RBP20.42■□□□□ 0.86
COPS7B-221ENST00000488111 KDM5BQ9UGL1 1544 aa20.41■□□□□ 0.86
COPS7B-221ENST00000488111 DIEXFQ68CQ4 756 aaKnown RBP20.39■□□□□ 0.86
COPS7B-221ENST00000488111 ZCCHC11Q5TAX3 1644 aaKnown RBP20.39■□□□□ 0.85
COPS7B-221ENST00000488111 RRBP1Q9P2E9 1410 aaKnown RBP20.39■□□□□ 0.85
COPS7B-221ENST00000488111 CCNB3Q8WWL7 1395 aa20.39■□□□□ 0.85
COPS7B-221ENST00000488111 KCNH8Q96L42 1107 aa20.39■□□□□ 0.85
COPS7B-221ENST00000488111 FAM50AQ14320 339 aaKnown RBP20.38■□□□□ 0.85
COPS7B-221ENST00000488111 NPM1P06748 294 aaKnown RBP eCLIP20.37■□□□□ 0.85
COPS7B-221ENST00000488111 ITGAEP38570 1179 aa20.36■□□□□ 0.85
COPS7B-221ENST00000488111 KIF14Q15058 1648 aa20.36■□□□□ 0.85
COPS7B-221ENST00000488111 MYOM3Q5VTT5 1437 aa20.35■□□□□ 0.85
COPS7B-221ENST00000488111 CCER1Q8TC90 406 aaPredicted RBP20.34■□□□□ 0.85
COPS7B-221ENST00000488111 FGD6Q6ZV73 1430 aa20.33■□□□□ 0.85
COPS7B-221ENST00000488111 ASXL2Q76L83 1435 aa20.27■□□□□ 0.84
COPS7B-221ENST00000488111 ABCC10Q5T3U5 1492 aa20.27■□□□□ 0.84
COPS7B-221ENST00000488111 CFDP1Q9UEE9 299 aaPredicted RBP20.27■□□□□ 0.83
COPS7B-221ENST00000488111 GPATCH8Q9UKJ3 1502 aaKnown RBP20.26■□□□□ 0.83
COPS7B-221ENST00000488111 ZNF644Q9H582 1327 aaPredicted RBP20.26■□□□□ 0.83
COPS7B-221ENST00000488111 ZNF777Q9ULD5 760 aaPredicted RBP20.26■□□□□ 0.83
COPS7B-221ENST00000488111 WDR7Q9Y4E6 1490 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms