RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 NISCHQ9Y2I1 1504 aa30.82■■■□□ 2.52
COPS7B-221ENST00000488111 CCDC180Q9P1Z9 1646 aa26.89■■□□□ 1.89
COPS7B-221ENST00000488111 ABCC9O60706 1549 aa25.87■■□□□ 1.73
COPS7B-221ENST00000488111 ZCCHC6Q5VYS8 1495 aaKnown RBP25.82■■□□□ 1.72
COPS7B-221ENST00000488111 DCAF8L2P0C7V8 631 aa25.77■■□□□ 1.72
COPS7B-221ENST00000488111 DCAF1Q9Y4B6 1507 aa25.39■■□□□ 1.66
COPS7B-221ENST00000488111 MYO15BQ96JP2 1530 aa25.18■■□□□ 1.62
COPS7B-221ENST00000488111 NACADO15069 1562 aa25.16■■□□□ 1.62
COPS7B-221ENST00000488111 SHROOM4Q9ULL8 1493 aa25.14■■□□□ 1.62
COPS7B-221ENST00000488111 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
COPS7B-221ENST00000488111 SCRIBQ14160 1630 aa24.83■■□□□ 1.57
COPS7B-221ENST00000488111 UNC13AQ9UPW8 1703 aa24.49■■□□□ 1.51
COPS7B-221ENST00000488111 PABPN1Q86U42 306 aaKnown RBP eCLIP24.42■■□□□ 1.5
COPS7B-221ENST00000488111 BICRAQ9NZM4 1560 aa24.3■■□□□ 1.48
COPS7B-221ENST00000488111 SUPT5HO00267 1087 aaKnown RBP24.07■■□□□ 1.44
COPS7B-221ENST00000488111 CECR2Q9BXF3 1484 aa24.05■■□□□ 1.44
COPS7B-221ENST00000488111 RSF1Q96T23 1441 aaPredicted RBP23.85■■□□□ 1.41
COPS7B-221ENST00000488111 MROH2BQ7Z745 1585 aa23.84■■□□□ 1.41
COPS7B-221ENST00000488111 BAZ1AQ9NRL2 1556 aaPredicted RBP23.79■■□□□ 1.4
COPS7B-221ENST00000488111 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
COPS7B-221ENST00000488111 WIZO95785 1651 aa23.62■■□□□ 1.37
COPS7B-221ENST00000488111 EIF4G1Q04637 1599 aaKnown RBP23.6■■□□□ 1.37
COPS7B-221ENST00000488111 ATAD2BQ9ULI0 1458 aa23.45■■□□□ 1.34
COPS7B-221ENST00000488111 PEG3Q9GZU2 1588 aa23.4■■□□□ 1.34
COPS7B-221ENST00000488111 SMARCA2P51531 1590 aa23.37■■□□□ 1.33
COPS7B-221ENST00000488111 CC2D2AQ9P2K1 1620 aa23.33■■□□□ 1.33
COPS7B-221ENST00000488111 TOP2AP11388 1531 aaKnown RBP23.32■■□□□ 1.32
COPS7B-221ENST00000488111 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
COPS7B-221ENST00000488111 NCAPD3P42695 1498 aa23.26■■□□□ 1.31
COPS7B-221ENST00000488111 HMGXB3Q12766 1538 aa23.16■■□□□ 1.3
COPS7B-221ENST00000488111 CCDC88BA6NC98 1476 aa23.15■■□□□ 1.3
COPS7B-221ENST00000488111 DNAJC5BQ9UF47 199 aa23.14■■□□□ 1.29
COPS7B-221ENST00000488111 CHIC1Q5VXU3 224 aa22.83■■□□□ 1.24
COPS7B-221ENST00000488111 CADPSQ9ULU8 1353 aa22.69■■□□□ 1.22
COPS7B-221ENST00000488111 CFTRP13569 1480 aa22.68■■□□□ 1.22
COPS7B-221ENST00000488111 NESP48681 1621 aa22.63■■□□□ 1.21
COPS7B-221ENST00000488111 ABCC8Q09428 1581 aa22.6■■□□□ 1.21
COPS7B-221ENST00000488111 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
COPS7B-221ENST00000488111 HRCP23327 699 aa22.55■■□□□ 1.2
COPS7B-221ENST00000488111 LAMC3Q9Y6N6 1575 aa22.48■■□□□ 1.19
COPS7B-221ENST00000488111 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
COPS7B-221ENST00000488111 FANCD2Q9BXW9 1451 aa22.44■■□□□ 1.18
COPS7B-221ENST00000488111 PRDM2Q13029 1718 aa22.42■■□□□ 1.18
COPS7B-221ENST00000488111 PDS5BQ9NTI5 1447 aa22.37■■□□□ 1.17
COPS7B-221ENST00000488111 SYNJ1O43426 1573 aa22.36■■□□□ 1.17
COPS7B-221ENST00000488111 CEP164Q9UPV0 1460 aa22.3■■□□□ 1.16
COPS7B-221ENST00000488111 CUX1P39880 1505 aa22.29■■□□□ 1.16
COPS7B-221ENST00000488111 FAM9AQ8IZU1 332 aaPredicted RBP22.26■■□□□ 1.15
COPS7B-221ENST00000488111 KIF21AQ7Z4S6 1674 aa22.25■■□□□ 1.15
COPS7B-221ENST00000488111 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
COPS7B-221ENST00000488111 BIVM-ERCC5R4GMW8 1640 aa22.19■■□□□ 1.14
COPS7B-221ENST00000488111 ERCC6Q03468 1493 aa22.18■■□□□ 1.14
COPS7B-221ENST00000488111 URB2Q14146 1524 aaKnown RBP22.17■■□□□ 1.14
COPS7B-221ENST00000488111 TOPBP1Q92547 1522 aa22.15■■□□□ 1.14
COPS7B-221ENST00000488111 SOGA1O94964 1423 aa22.14■■□□□ 1.14
COPS7B-221ENST00000488111 DNMBPQ6XZF7 1577 aa22.13■■□□□ 1.13
COPS7B-221ENST00000488111 FGD5Q6ZNL6 1462 aa22.11■■□□□ 1.13
COPS7B-221ENST00000488111 MRC2Q9UBG0 1479 aa22.09■■□□□ 1.13
COPS7B-221ENST00000488111 RUSC2Q8N2Y8 1516 aa22.09■■□□□ 1.13
COPS7B-221ENST00000488111 POLA1P09884 1462 aaPredicted RBP22.03■■□□□ 1.12
COPS7B-221ENST00000488111 LOC105371045A0A1W2PR82 267 aa22.03■■□□□ 1.12
COPS7B-221ENST00000488111 EHMT2Q96KQ7 1210 aa22.03■■□□□ 1.12
COPS7B-221ENST00000488111 RAD54L2Q9Y4B4 1467 aa22.01■■□□□ 1.11
COPS7B-221ENST00000488111 WDR62O43379 1518 aa21.95■■□□□ 1.1
COPS7B-221ENST00000488111 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.1
COPS7B-221ENST00000488111 CSRNP3Q8WYN3 585 aa21.95■■□□□ 1.1
COPS7B-221ENST00000488111 PCGF6Q9BYE7 350 aa21.95■■□□□ 1.1
COPS7B-221ENST00000488111 CUX2O14529 1486 aa21.94■■□□□ 1.1
COPS7B-221ENST00000488111 EEA1Q15075 1411 aa21.92■■□□□ 1.1
COPS7B-221ENST00000488111 PPARGC1BQ86YN6 1023 aaKnown RBP21.91■■□□□ 1.1
COPS7B-221ENST00000488111 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
COPS7B-221ENST00000488111 ABCA10Q8WWZ4 1543 aa21.86■■□□□ 1.09
COPS7B-221ENST00000488111 TDRD9Q8NDG6 1382 aaKnown RBP21.85■■□□□ 1.09
COPS7B-221ENST00000488111 TARBP1Q13395 1621 aaKnown RBP21.8■■□□□ 1.08
COPS7B-221ENST00000488111 PELP1Q8IZL8 1130 aaKnown RBP21.8■■□□□ 1.08
COPS7B-221ENST00000488111 IGF1RP08069 1367 aa21.77■■□□□ 1.08
COPS7B-221ENST00000488111 IFT140Q96RY7 1462 aa21.77■■□□□ 1.08
COPS7B-221ENST00000488111 WDR97A6NE52 1622 aa21.76■■□□□ 1.07
COPS7B-221ENST00000488111 AQRO60306 1485 aaKnown RBP eCLIP21.74■■□□□ 1.072e-6■■■■■ 29.8
COPS7B-221ENST00000488111 ZNF608Q9ULD9 1512 aaPredicted RBP21.74■■□□□ 1.07
COPS7B-221ENST00000488111 GAPVD1Q14C86 1478 aa21.72■■□□□ 1.07
COPS7B-221ENST00000488111 UBTFP17480 764 aaKnown RBP21.69■■□□□ 1.06
COPS7B-221ENST00000488111 ABCA5Q8WWZ7 1642 aa21.68■■□□□ 1.06
COPS7B-221ENST00000488111 RAPGEF2Q9Y4G8 1499 aa21.68■■□□□ 1.06
COPS7B-221ENST00000488111 PRXQ9BXM0 1461 aa21.67■■□□□ 1.06
COPS7B-221ENST00000488111 CARMIL1Q5VZK9 1371 aa21.65■■□□□ 1.06
COPS7B-221ENST00000488111 GOLGA3Q08378 1498 aa21.65■■□□□ 1.06
COPS7B-221ENST00000488111 KIF21BO75037 1637 aa21.64■■□□□ 1.05
COPS7B-221ENST00000488111 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.05
COPS7B-221ENST00000488111 EIF4G3O43432 1585 aaKnown RBP21.58■■□□□ 1.04
COPS7B-221ENST00000488111 GRIN2BQ13224 1484 aa21.57■■□□□ 1.04
COPS7B-221ENST00000488111 TNIKQ9UKE5 1360 aa21.54■■□□□ 1.04
COPS7B-221ENST00000488111 PBRM1Q86U86 1689 aa21.54■■□□□ 1.04
COPS7B-221ENST00000488111 RANGAP1P46060 587 aaPredicted RBP21.52■■□□□ 1.04
COPS7B-221ENST00000488111 CUL7Q14999 1698 aa21.5■■□□□ 1.03
COPS7B-221ENST00000488111 SNAPC4Q5SXM2 1469 aa21.49■■□□□ 1.03
COPS7B-221ENST00000488111 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
COPS7B-221ENST00000488111 CEP162Q5TB80 1403 aa21.43■■□□□ 1.02
COPS7B-221ENST00000488111 FBLN2P98095 1184 aa21.43■■□□□ 1.02
COPS7B-221ENST00000488111 ADAMTS12P58397 1594 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 177.2 ms