RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 CYB5RLQ6IPT4 315 aa28.99■■■□□ 2.23
HMG20B-212ENST00000487894 KIAA0586Q9BVV6 1533 aa28.94■■■□□ 2.22
HMG20B-212ENST00000487894 RAPGEF2Q9Y4G8 1499 aa28.9■■■□□ 2.22
HMG20B-212ENST00000487894 PRG4Q92954 1404 aaPredicted RBP28.87■■■□□ 2.21
HMG20B-212ENST00000487894 JPH4Q96JJ6 628 aa28.84■■■□□ 2.21
HMG20B-212ENST00000487894 IQGAP2Q13576 1575 aa28.84■■■□□ 2.21
HMG20B-212ENST00000487894 CTTNBP2Q8WZ74 1663 aa28.83■■■□□ 2.21
HMG20B-212ENST00000487894 PRXQ9BXM0 1461 aa28.79■■■□□ 2.2
HMG20B-212ENST00000487894 EEA1Q15075 1411 aa28.72■■■□□ 2.19
HMG20B-212ENST00000487894 UGGT2Q9NYU1 1516 aa28.65■■■□□ 2.18
HMG20B-212ENST00000487894 CSRNP3Q8WYN3 585 aa28.62■■■□□ 2.17
HMG20B-212ENST00000487894 DISP1Q96F81 1524 aa28.61■■■□□ 2.17
HMG20B-212ENST00000487894 KIAA0556O60303 1618 aa28.59■■■□□ 2.17
HMG20B-212ENST00000487894 CARMIL2Q6F5E8 1435 aa28.59■■■□□ 2.17
HMG20B-212ENST00000487894 ADCY10Q96PN6 1610 aa28.58■■■□□ 2.17
HMG20B-212ENST00000487894 AEBP2Q6ZN18 517 aaPredicted RBP28.56■■■□□ 2.16
HMG20B-212ENST00000487894 KIF21BO75037 1637 aa28.55■■■□□ 2.16
HMG20B-212ENST00000487894 TNIKQ9UKE5 1360 aa28.51■■■□□ 2.16
HMG20B-212ENST00000487894 FAM9AQ8IZU1 332 aaPredicted RBP28.5■■■□□ 2.15
HMG20B-212ENST00000487894 PTPRGP23470 1445 aa28.48■■■□□ 2.15
HMG20B-212ENST00000487894 GOLGA3Q08378 1498 aa28.43■■■□□ 2.14
HMG20B-212ENST00000487894 TRHP20396 242 aaPredicted RBP28.43■■■□□ 2.14
HMG20B-212ENST00000487894 KIF13AQ9H1H9 1805 aa28.4■■■□□ 2.14
HMG20B-212ENST00000487894 SAMD9Q5K651 1589 aa28.38■■■□□ 2.13
HMG20B-212ENST00000487894 MAPKBP1O60336 1514 aa28.38■■■□□ 2.13
HMG20B-212ENST00000487894 TTBK1Q5TCY1 1321 aaPredicted RBP28.37■■■□□ 2.13
HMG20B-212ENST00000487894 UHRF1BP1LA0JNW5 1464 aa28.35■■■□□ 2.13
HMG20B-212ENST00000487894 ABCC2Q92887 1545 aa28.35■■■□□ 2.13
HMG20B-212ENST00000487894 UACAQ9BZF9 1416 aa28.32■■■□□ 2.12
HMG20B-212ENST00000487894 NPM1P06748 294 aaKnown RBP eCLIP28.27■■■□□ 2.12
HMG20B-212ENST00000487894 ABCA8O94911 1581 aa28.26■■■□□ 2.11
HMG20B-212ENST00000487894 DIP2BQ9P265 1576 aa28.26■■■□□ 2.11
HMG20B-212ENST00000487894 ZCCHC11Q5TAX3 1644 aaKnown RBP28.25■■■□□ 2.11
HMG20B-212ENST00000487894 PLB1Q6P1J6 1458 aa28.23■■■□□ 2.11
HMG20B-212ENST00000487894 KDM5BQ9UGL1 1544 aa28.22■■■□□ 2.11
HMG20B-212ENST00000487894 ABCC10Q5T3U5 1492 aa28.21■■■□□ 2.11
HMG20B-212ENST00000487894 EFCAB5A4FU69 1503 aa28.18■■■□□ 2.1
HMG20B-212ENST00000487894 P3H3Q8IVL6 736 aa28.14■■■□□ 2.1
HMG20B-212ENST00000487894 EHMT2Q96KQ7 1210 aa28.13■■■□□ 2.09
HMG20B-212ENST00000487894 ASXL2Q76L83 1435 aa28.12■■■□□ 2.09
HMG20B-212ENST00000487894 RAPGEF6Q8TEU7 1601 aa28.11■■■□□ 2.09
HMG20B-212ENST00000487894 FHOD3Q2V2M9 1422 aa28.1■■■□□ 2.09
HMG20B-212ENST00000487894 UBTFP17480 764 aaKnown RBP28.09■■■□□ 2.09
HMG20B-212ENST00000487894 RANGAP1P46060 587 aaPredicted RBP28.09■■■□□ 2.09
HMG20B-212ENST00000487894 TSPOAP1O95153 1857 aa28.06■■■□□ 2.08
HMG20B-212ENST00000487894 FAM69CQ0P6D2 419 aa28.05■■■□□ 2.08
HMG20B-212ENST00000487894 GLI2P10070 1586 aa28.04■■■□□ 2.08
HMG20B-212ENST00000487894 ARHGAP35Q9NRY4 1499 aa28■■■□□ 2.07
HMG20B-212ENST00000487894 EPRSP07814 1512 aaKnown RBP27.99■■■□□ 2.07
HMG20B-212ENST00000487894 WDR7Q9Y4E6 1490 aa27.99■■■□□ 2.07
HMG20B-212ENST00000487894 PPRC1Q5VV67 1664 aaKnown RBP27.98■■■□□ 2.07
HMG20B-212ENST00000487894 MAP3K4Q9Y6R4 1608 aa27.96■■■□□ 2.07
HMG20B-212ENST00000487894 ATP10BO94823 1461 aa27.95■■■□□ 2.06
HMG20B-212ENST00000487894 NUP153P49790 1475 aaKnown RBP27.95■■■□□ 2.06
HMG20B-212ENST00000487894 CFAP43Q8NDM7 1665 aa27.88■■■□□ 2.05
HMG20B-212ENST00000487894 ARID3CA6NKF2 412 aa27.86■■■□□ 2.05
HMG20B-212ENST00000487894 FMN1Q68DA7 1419 aa27.84■■■□□ 2.05
HMG20B-212ENST00000487894 HECW1Q76N89 1606 aa27.83■■■□□ 2.05
HMG20B-212ENST00000487894 KDM6BO15054 1643 aa27.81■■■□□ 2.04
HMG20B-212ENST00000487894 LRRIQ1Q96JM4 1722 aa27.8■■■□□ 2.04
HMG20B-212ENST00000487894 ABCA9Q8IUA7 1624 aa27.77■■■□□ 2.04
HMG20B-212ENST00000487894 CDK13Q14004 1512 aaKnown RBP27.77■■■□□ 2.04
HMG20B-212ENST00000487894 PCF11O94913 1555 aaKnown RBP27.74■■■□□ 2.03
HMG20B-212ENST00000487894 CLIP1P30622 1438 aa27.74■■■□□ 2.03
HMG20B-212ENST00000487894 TEX14Q8IWB6 1497 aa27.73■■■□□ 2.03
HMG20B-212ENST00000487894 KCNH8Q96L42 1107 aa27.73■■■□□ 2.03
HMG20B-212ENST00000487894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.7■■■□□ 2.02
HMG20B-212ENST00000487894 HNRNPUL2Q1KMD3 747 aaKnown RBP27.7■■■□□ 2.02
HMG20B-212ENST00000487894 MAGI3Q5TCQ9 1506 aa27.7■■■□□ 2.02
HMG20B-212ENST00000487894 CD109Q6YHK3 1445 aa27.68■■■□□ 2.02
HMG20B-212ENST00000487894 CASKIN1Q8WXD9 1431 aa27.63■■■□□ 2.01
HMG20B-212ENST00000487894 CEP162Q5TB80 1403 aa27.61■■■□□ 2.01
HMG20B-212ENST00000487894 TTC37Q6PGP7 1564 aa27.6■■■□□ 2.01
HMG20B-212ENST00000487894 FYCO1Q9BQS8 1478 aa27.6■■■□□ 2.01
HMG20B-212ENST00000487894 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.59■■■□□ 2.01
HMG20B-212ENST00000487894 COL17A1Q9UMD9 1497 aaPredicted RBP27.58■■■□□ 2.01
HMG20B-212ENST00000487894 PLEKHD1A6NEE1 506 aa27.58■■■□□ 2.01
HMG20B-212ENST00000487894 ATP1B4Q9UN42 357 aaPredicted RBP27.58■■■□□ 2.01
HMG20B-212ENST00000487894 CCDC18Q5T9S5 1454 aa27.56■■■□□ 2
HMG20B-212ENST00000487894 KIF14Q15058 1648 aa27.53■■■□□ 2
HMG20B-212ENST00000487894 LOC105371045A0A1W2PR82 267 aa27.51■■□□□ 1.99
HMG20B-212ENST00000487894 MYO5CQ9NQX4 1742 aa27.49■■□□□ 1.99
HMG20B-212ENST00000487894 TROQ12816 1431 aaPredicted RBP27.48■■□□□ 1.99
HMG20B-212ENST00000487894 CFAP74Q9C0B2 1584 aa27.48■■□□□ 1.99
HMG20B-212ENST00000487894 ARAP3Q8WWN8 1544 aa27.46■■□□□ 1.99
HMG20B-212ENST00000487894 NEO1Q92859 1461 aa27.46■■□□□ 1.99
HMG20B-212ENST00000487894 CDK11AQ9UQ88 783 aaPredicted RBP27.44■■□□□ 1.98
HMG20B-212ENST00000487894 PHLDB1Q86UU1 1377 aa27.4■■□□□ 1.98
HMG20B-212ENST00000487894 FRMPD1Q5SYB0 1578 aa27.39■■□□□ 1.97
HMG20B-212ENST00000487894 FANCAO15360 1455 aa27.38■■□□□ 1.97
HMG20B-212ENST00000487894 RICTORQ6R327 1708 aa27.36■■□□□ 1.97
HMG20B-212ENST00000487894 CDC42BPBQ9Y5S2 1711 aa27.36■■□□□ 1.97
HMG20B-212ENST00000487894 PLCH2O75038 1416 aa27.34■■□□□ 1.97
HMG20B-212ENST00000487894 PREX2Q70Z35 1606 aa27.34■■□□□ 1.97
HMG20B-212ENST00000487894 CDC42BPAQ5VT25 1732 aa27.33■■□□□ 1.97
HMG20B-212ENST00000487894 AKNAQ7Z591 1439 aa27.32■■□□□ 1.96
HMG20B-212ENST00000487894 VPS8Q8N3P4 1428 aa27.29■■□□□ 1.96
HMG20B-212ENST00000487894 ARHGAP5Q13017 1502 aa27.26■■□□□ 1.96
HMG20B-212ENST00000487894 EHBP1L1Q8N3D4 1523 aa27.26■■□□□ 1.95
HMG20B-212ENST00000487894 DENND4BO75064 1496 aaPredicted RBP27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms