RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 SHROOM2Q13796 1616 aa22.2■■□□□ 1.14
RPSA-208ENST00000487876 RUSC2Q8N2Y8 1516 aa22.17■■□□□ 1.14
RPSA-208ENST00000487876 PHF23Q9BUL5 403 aaPredicted RBP22.11■■□□□ 1.13
RPSA-208ENST00000487876 CARMIL1Q5VZK9 1371 aa22.08■■□□□ 1.12
RPSA-208ENST00000487876 PRG4Q92954 1404 aaPredicted RBP22.03■■□□□ 1.12
RPSA-208ENST00000487876 KIAA0586Q9BVV6 1533 aa22.01■■□□□ 1.11
RPSA-208ENST00000487876 JPH4Q96JJ6 628 aa22■■□□□ 1.11
RPSA-208ENST00000487876 RAPGEF2Q9Y4G8 1499 aa21.95■■□□□ 1.1
RPSA-208ENST00000487876 IQGAP2Q13576 1575 aa21.92■■□□□ 1.1
RPSA-208ENST00000487876 CTTNBP2Q8WZ74 1663 aa21.85■■□□□ 1.09
RPSA-208ENST00000487876 TRHP20396 242 aaPredicted RBP21.84■■□□□ 1.09
RPSA-208ENST00000487876 PRXQ9BXM0 1461 aa21.83■■□□□ 1.09
RPSA-208ENST00000487876 ADCY10Q96PN6 1610 aa21.8■■□□□ 1.08
RPSA-208ENST00000487876 DISP1Q96F81 1524 aa21.78■■□□□ 1.08
RPSA-208ENST00000487876 UGGT2Q9NYU1 1516 aa21.77■■□□□ 1.08
RPSA-208ENST00000487876 CARMIL2Q6F5E8 1435 aa21.75■■□□□ 1.07
RPSA-208ENST00000487876 KIAA0556O60303 1618 aa21.73■■□□□ 1.07
RPSA-208ENST00000487876 TTBK1Q5TCY1 1321 aaPredicted RBP21.72■■□□□ 1.07
RPSA-208ENST00000487876 CSRNP3Q8WYN3 585 aa21.71■■□□□ 1.07
RPSA-208ENST00000487876 TNIKQ9UKE5 1360 aa21.71■■□□□ 1.07
RPSA-208ENST00000487876 PTPRGP23470 1445 aa21.71■■□□□ 1.07
RPSA-208ENST00000487876 EEA1Q15075 1411 aa21.71■■□□□ 1.07
RPSA-208ENST00000487876 KIF13AQ9H1H9 1805 aa21.69■■□□□ 1.06
RPSA-208ENST00000487876 FAM9AQ8IZU1 332 aaPredicted RBP21.67■■□□□ 1.06
RPSA-208ENST00000487876 MAPKBP1O60336 1514 aa21.63■■□□□ 1.05
RPSA-208ENST00000487876 KIF21BO75037 1637 aa21.59■■□□□ 1.05
RPSA-208ENST00000487876 GOLGA3Q08378 1498 aa21.58■■□□□ 1.05
RPSA-208ENST00000487876 NPM1P06748 294 aaKnown RBP eCLIP21.58■■□□□ 1.05
RPSA-208ENST00000487876 ABCC2Q92887 1545 aa21.58■■□□□ 1.04
RPSA-208ENST00000487876 UACAQ9BZF9 1416 aa21.57■■□□□ 1.04
RPSA-208ENST00000487876 UHRF1BP1LA0JNW5 1464 aa21.57■■□□□ 1.04
RPSA-208ENST00000487876 DIP2BQ9P265 1576 aa21.57■■□□□ 1.04
RPSA-208ENST00000487876 ABCC10Q5T3U5 1492 aa21.54■■□□□ 1.04
RPSA-208ENST00000487876 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
RPSA-208ENST00000487876 PLB1Q6P1J6 1458 aa21.52■■□□□ 1.03
RPSA-208ENST00000487876 ZCCHC11Q5TAX3 1644 aaKnown RBP21.51■■□□□ 1.03
RPSA-208ENST00000487876 ABCA8O94911 1581 aa21.49■■□□□ 1.03
RPSA-208ENST00000487876 KDM5BQ9UGL1 1544 aa21.49■■□□□ 1.03
RPSA-208ENST00000487876 FAM69CQ0P6D2 419 aa21.47■■□□□ 1.03
RPSA-208ENST00000487876 ASXL2Q76L83 1435 aa21.46■■□□□ 1.03
RPSA-208ENST00000487876 P3H3Q8IVL6 736 aa21.46■■□□□ 1.03
RPSA-208ENST00000487876 EHMT2Q96KQ7 1210 aa21.45■■□□□ 1.02
RPSA-208ENST00000487876 TSPOAP1O95153 1857 aa21.45■■□□□ 1.02
RPSA-208ENST00000487876 RANGAP1P46060 587 aaPredicted RBP21.43■■□□□ 1.02
RPSA-208ENST00000487876 FHOD3Q2V2M9 1422 aa21.38■■□□□ 1.01
RPSA-208ENST00000487876 GLI2P10070 1586 aa21.36■■□□□ 1.01
RPSA-208ENST00000487876 EFCAB5A4FU69 1503 aa21.35■■□□□ 1.01
RPSA-208ENST00000487876 PPRC1Q5VV67 1664 aaKnown RBP21.35■■□□□ 1.01
RPSA-208ENST00000487876 RAPGEF6Q8TEU7 1601 aa21.35■■□□□ 1.01
RPSA-208ENST00000487876 EPRSP07814 1512 aaKnown RBP21.34■■□□□ 1.01
RPSA-208ENST00000487876 WDR7Q9Y4E6 1490 aa21.33■■□□□ 1.01
RPSA-208ENST00000487876 UBTFP17480 764 aaKnown RBP21.32■■□□□ 1
RPSA-208ENST00000487876 MAP3K4Q9Y6R4 1608 aa21.31■■□□□ 1
RPSA-208ENST00000487876 ARID3CA6NKF2 412 aa21.3■■□□□ 1
RPSA-208ENST00000487876 ATP10BO94823 1461 aa21.27■■□□□ 1
RPSA-208ENST00000487876 NUP153P49790 1475 aaKnown RBP21.26■□□□□ 0.99
RPSA-208ENST00000487876 KDM6BO15054 1643 aa21.26■□□□□ 0.99
RPSA-208ENST00000487876 ARHGAP35Q9NRY4 1499 aa21.24■□□□□ 0.99
RPSA-208ENST00000487876 CFAP43Q8NDM7 1665 aa21.21■□□□□ 0.99
RPSA-208ENST00000487876 KCNH8Q96L42 1107 aa21.18■□□□□ 0.98
RPSA-208ENST00000487876 TEX14Q8IWB6 1497 aa21.13■□□□□ 0.97
RPSA-208ENST00000487876 CDK13Q14004 1512 aaKnown RBP21.13■□□□□ 0.97
RPSA-208ENST00000487876 ABCA9Q8IUA7 1624 aa21.12■□□□□ 0.97
RPSA-208ENST00000487876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.12■□□□□ 0.97
RPSA-208ENST00000487876 HNRNPUL2Q1KMD3 747 aaKnown RBP21.12■□□□□ 0.97
RPSA-208ENST00000487876 CD109Q6YHK3 1445 aa21.12■□□□□ 0.97
RPSA-208ENST00000487876 COL17A1Q9UMD9 1497 aaPredicted RBP21.11■□□□□ 0.97
RPSA-208ENST00000487876 FMN1Q68DA7 1419 aa21.11■□□□□ 0.97
RPSA-208ENST00000487876 HECW1Q76N89 1606 aa21.11■□□□□ 0.97
RPSA-208ENST00000487876 MAGI3Q5TCQ9 1506 aa21.1■□□□□ 0.97
RPSA-208ENST00000487876 LRRIQ1Q96JM4 1722 aa21.1■□□□□ 0.97
RPSA-208ENST00000487876 PCF11O94913 1555 aaKnown RBP21.05■□□□□ 0.96
RPSA-208ENST00000487876 ATP1B4Q9UN42 357 aaPredicted RBP21.02■□□□□ 0.96
RPSA-208ENST00000487876 CLIP1P30622 1438 aa21.02■□□□□ 0.96
RPSA-208ENST00000487876 TTC37Q6PGP7 1564 aa21.01■□□□□ 0.95
RPSA-208ENST00000487876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.99■□□□□ 0.955e-7■■□□□ 12.4
RPSA-208ENST00000487876 PLEKHD1A6NEE1 506 aa20.99■□□□□ 0.95
RPSA-208ENST00000487876 CASKIN1Q8WXD9 1431 aa20.95■□□□□ 0.95
RPSA-208ENST00000487876 KIF14Q15058 1648 aa20.94■□□□□ 0.94
RPSA-208ENST00000487876 ARAP3Q8WWN8 1544 aa20.93■□□□□ 0.94
RPSA-208ENST00000487876 FYCO1Q9BQS8 1478 aa20.92■□□□□ 0.94
RPSA-208ENST00000487876 NEO1Q92859 1461 aa20.91■□□□□ 0.94
RPSA-208ENST00000487876 CEP162Q5TB80 1403 aa20.9■□□□□ 0.94
RPSA-208ENST00000487876 CCDC18Q5T9S5 1454 aa20.88■□□□□ 0.93
RPSA-208ENST00000487876 MYO5CQ9NQX4 1742 aa20.88■□□□□ 0.93
RPSA-208ENST00000487876 FRMPD1Q5SYB0 1578 aa20.88■□□□□ 0.93
RPSA-208ENST00000487876 CFAP74Q9C0B2 1584 aa20.88■□□□□ 0.93
RPSA-208ENST00000487876 TROQ12816 1431 aaPredicted RBP20.87■□□□□ 0.93
RPSA-208ENST00000487876 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
RPSA-208ENST00000487876 FANCAO15360 1455 aa20.86■□□□□ 0.93
RPSA-208ENST00000487876 PHLDB1Q86UU1 1377 aa20.85■□□□□ 0.93
RPSA-208ENST00000487876 CDK11AQ9UQ88 783 aaPredicted RBP20.84■□□□□ 0.93
RPSA-208ENST00000487876 RICTORQ6R327 1708 aa20.83■□□□□ 0.92
RPSA-208ENST00000487876 AKNAQ7Z591 1439 aa20.81■□□□□ 0.92
RPSA-208ENST00000487876 KDM4FA0A1W2PPD8 638 aa20.81■□□□□ 0.92
RPSA-208ENST00000487876 RAPGEF3O95398 923 aa20.81■□□□□ 0.92
RPSA-208ENST00000487876 PLCH2O75038 1416 aa20.8■□□□□ 0.92
RPSA-208ENST00000487876 FOXD1Q16676 465 aa20.8■□□□□ 0.92
RPSA-208ENST00000487876 ADGRL1O94910 1474 aa20.79■□□□□ 0.92
RPSA-208ENST00000487876 CDC42BPBQ9Y5S2 1711 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms