RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, humanhuman


Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-208ENST00000487876 RPS3P23396 243 aaKnown RBP eCLIP12.51□□□□□ -0.414e-18■■■■■ 121.3
RPSA-208ENST00000487876 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.07□□□□□ -0.648e-26■■■■■ 58.2
RPSA-208ENST00000487876 AQRO60306 1485 aaKnown RBP eCLIP22.9■■□□□ 1.265e-8■■■■■ 47
RPSA-208ENST00000487876 TIA1P31483 386 aaKnown RBP eCLIP11.92□□□□□ -0.52e-9■■■■■ 44.4
RPSA-208ENST00000487876 PABPC4Q13310 644 aaKnown RBP eCLIP15.47■□□□□ 0.074e-17■■■■■ 40.5
RPSA-208ENST00000487876 WRNQ14191 1432 aaPredicted RBP eCLIP22.77■■□□□ 1.247e-10■■■■■ 33.4
RPSA-208ENST00000487876 EFTUD2Q15029 972 aaKnown RBP eCLIP12.3□□□□□ -0.443e-6■■■■□ 26.7
RPSA-208ENST00000487876 LARP4Q71RC2 724 aaKnown RBP eCLIP11.78□□□□□ -0.526e-6■■■■□ 26.1
RPSA-208ENST00000487876 NCBP2P52298 156 aaKnown RBP eCLIP11.84□□□□□ -0.512e-20■■■■□ 20.5
RPSA-208ENST00000487876 DDX3XO00571 662 aaKnown RBP eCLIP13.24□□□□□ -0.291e-7■■■□□ 19
RPSA-208ENST00000487876 TIAL1Q01085 375 aaKnown RBP eCLIP12.43□□□□□ -0.422e-8■■■□□ 18.9
RPSA-208ENST00000487876 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.99■□□□□ 0.955e-7■■□□□ 12.4
RPSA-208ENST00000487876 RBM22Q9NW64 420 aaKnown RBP eCLIP12.96□□□□□ -0.331e-6■□□□□ 8.1
Retrieved 13 of 13 RNA–protein pairs in 5.5 ms