RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 CHMP7Q8WUX9 453 aaPredicted RBP12.9□□□□□ -0.34
RBM28-206ENST00000487602 SYNJ2O15056 1496 aa12.9□□□□□ -0.34
RBM28-206ENST00000487602 FBLN2P98095 1184 aa12.87□□□□□ -0.35
RBM28-206ENST00000487602 CTTNBP2Q8WZ74 1663 aa12.86□□□□□ -0.35
RBM28-206ENST00000487602 GRIN2AQ12879 1464 aa12.85□□□□□ -0.35
RBM28-206ENST00000487602 CEP162Q5TB80 1403 aa12.81□□□□□ -0.36
RBM28-206ENST00000487602 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
RBM28-206ENST00000487602 RANGAP1P46060 587 aaPredicted RBP12.79□□□□□ -0.36
RBM28-206ENST00000487602 NUP160Q12769 1436 aa12.79□□□□□ -0.36
RBM28-206ENST00000487602 CLIP1P30622 1438 aa12.78□□□□□ -0.36
RBM28-206ENST00000487602 KIAA0586Q9BVV6 1533 aa12.78□□□□□ -0.36
RBM28-206ENST00000487602 CLASP1Q7Z460 1538 aa12.77□□□□□ -0.37
RBM28-206ENST00000487602 IQGAP2Q13576 1575 aa12.74□□□□□ -0.37
RBM28-206ENST00000487602 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
RBM28-206ENST00000487602 SHROOM2Q13796 1616 aa12.72□□□□□ -0.37
RBM28-206ENST00000487602 ARHGAP35Q9NRY4 1499 aa12.71□□□□□ -0.38
RBM28-206ENST00000487602 OSCARQ8IYS5 282 aa12.7□□□□□ -0.38
RBM28-206ENST00000487602 UGGT2Q9NYU1 1516 aa12.69□□□□□ -0.38
RBM28-206ENST00000487602 P3H3Q8IVL6 736 aa12.69□□□□□ -0.38
RBM28-206ENST00000487602 EFCAB5A4FU69 1503 aa12.67□□□□□ -0.38
RBM28-206ENST00000487602 ARAP1Q96P48 1450 aa12.66□□□□□ -0.38
RBM28-206ENST00000487602 SAMD9Q5K651 1589 aa12.65□□□□□ -0.38
RBM28-206ENST00000487602 FHOD3Q2V2M9 1422 aa12.63□□□□□ -0.39
RBM28-206ENST00000487602 CARMIL2Q6F5E8 1435 aa12.63□□□□□ -0.39
RBM28-206ENST00000487602 DISP1Q96F81 1524 aa12.63□□□□□ -0.39
RBM28-206ENST00000487602 KIAA0556O60303 1618 aa12.63□□□□□ -0.39
RBM28-206ENST00000487602 VPS8Q8N3P4 1428 aa12.62□□□□□ -0.39
RBM28-206ENST00000487602 PRG4Q92954 1404 aaPredicted RBP12.62□□□□□ -0.39
RBM28-206ENST00000487602 FMN1Q68DA7 1419 aa12.59□□□□□ -0.39
RBM28-206ENST00000487602 ERCC6L2Q5T890 1561 aa12.56□□□□□ -0.4
RBM28-206ENST00000487602 ARHGEF11O15085 1522 aa12.56□□□□□ -0.4
RBM28-206ENST00000487602 TTBK1Q5TCY1 1321 aaPredicted RBP12.55□□□□□ -0.4
RBM28-206ENST00000487602 RIMBP3CA6NJZ7 1639 aa12.55□□□□□ -0.4
RBM28-206ENST00000487602 RIMBP3BA6NNM3 1639 aa12.55□□□□□ -0.4
RBM28-206ENST00000487602 RIMBP3Q9UFD9 1639 aa12.55□□□□□ -0.4
RBM28-206ENST00000487602 CASKIN1Q8WXD9 1431 aa12.54□□□□□ -0.4
RBM28-206ENST00000487602 PTPRGP23470 1445 aa12.54□□□□□ -0.4
RBM28-206ENST00000487602 APLP2Q06481 763 aa12.53□□□□□ -0.4
RBM28-206ENST00000487602 ATP1B4Q9UN42 357 aaPredicted RBP12.52□□□□□ -0.41
RBM28-206ENST00000487602 PPP6R1Q9UPN7 881 aa12.52□□□□□ -0.41
RBM28-206ENST00000487602 FYCO1Q9BQS8 1478 aa12.5□□□□□ -0.41
RBM28-206ENST00000487602 PCF11O94913 1555 aaKnown RBP12.48□□□□□ -0.41
RBM28-206ENST00000487602 PLB1Q6P1J6 1458 aa12.46□□□□□ -0.41
RBM28-206ENST00000487602 ADRA2BP18089 450 aa12.46□□□□□ -0.41
RBM28-206ENST00000487602 PPARGC1BQ86YN6 1023 aaKnown RBP12.46□□□□□ -0.41
RBM28-206ENST00000487602 RAPGEF6Q8TEU7 1601 aa12.46□□□□□ -0.41
RBM28-206ENST00000487602 MAP3K1Q13233 1512 aa12.46□□□□□ -0.42
RBM28-206ENST00000487602 UACAQ9BZF9 1416 aa12.45□□□□□ -0.42
RBM28-206ENST00000487602 HECW1Q76N89 1606 aa12.45□□□□□ -0.42
RBM28-206ENST00000487602 ABCA8O94911 1581 aa12.45□□□□□ -0.42
RBM28-206ENST00000487602 KANK4Q5T7N3 995 aaPredicted RBP12.44□□□□□ -0.42
RBM28-206ENST00000487602 NUP153P49790 1475 aaKnown RBP12.43□□□□□ -0.42
RBM28-206ENST00000487602 EPRSP07814 1512 aaKnown RBP12.42□□□□□ -0.42
RBM28-206ENST00000487602 ABCC2Q92887 1545 aa12.42□□□□□ -0.42
RBM28-206ENST00000487602 CCDC18Q5T9S5 1454 aa12.42□□□□□ -0.42
RBM28-206ENST00000487602 ARID3CA6NKF2 412 aa12.42□□□□□ -0.42
RBM28-206ENST00000487602 ADCY10Q96PN6 1610 aa12.41□□□□□ -0.42
RBM28-206ENST00000487602 TIAM1Q13009 1591 aa12.41□□□□□ -0.42
RBM28-206ENST00000487602 LRRIQ1Q96JM4 1722 aa12.41□□□□□ -0.42
RBM28-206ENST00000487602 CFAP43Q8NDM7 1665 aa12.41□□□□□ -0.42
RBM28-206ENST00000487602 UHRF1BP1LA0JNW5 1464 aa12.4□□□□□ -0.42
RBM28-206ENST00000487602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.42
RBM28-206ENST00000487602 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.42
RBM28-206ENST00000487602 CDK11AQ9UQ88 783 aaPredicted RBP12.39□□□□□ -0.43
RBM28-206ENST00000487602 ATP10BO94823 1461 aa12.39□□□□□ -0.43
RBM28-206ENST00000487602 LRRC9Q6ZRR7 1453 aa12.39□□□□□ -0.43
RBM28-206ENST00000487602 CDK13Q14004 1512 aaKnown RBP12.37□□□□□ -0.43
RBM28-206ENST00000487602 ZCCHC11Q5TAX3 1644 aaKnown RBP12.37□□□□□ -0.43
RBM28-206ENST00000487602 MTUS2Q5JR59 1369 aa12.36□□□□□ -0.43
RBM28-206ENST00000487602 PLEKHD1A6NEE1 506 aa12.35□□□□□ -0.43
RBM28-206ENST00000487602 CYB5RLQ6IPT4 315 aa12.35□□□□□ -0.43
RBM28-206ENST00000487602 DNAJC5Q9H3Z4 198 aa12.34□□□□□ -0.43
RBM28-206ENST00000487602 KDM5BQ9UGL1 1544 aa12.33□□□□□ -0.44
RBM28-206ENST00000487602 MAGI3Q5TCQ9 1506 aa12.32□□□□□ -0.44
RBM28-206ENST00000487602 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
RBM28-206ENST00000487602 TRIM26Q12899 539 aaPredicted RBP12.32□□□□□ -0.44
RBM28-206ENST00000487602 EHBP1L1Q8N3D4 1523 aa12.32□□□□□ -0.44
RBM28-206ENST00000487602 TROQ12816 1431 aaPredicted RBP12.31□□□□□ -0.44
RBM28-206ENST00000487602 MAPKBP1O60336 1514 aa12.28□□□□□ -0.44
RBM28-206ENST00000487602 NCOA2Q15596 1464 aa12.27□□□□□ -0.44
RBM28-206ENST00000487602 PHLDB1Q86UU1 1377 aa12.27□□□□□ -0.45
RBM28-206ENST00000487602 SUPT6HQ7KZ85 1726 aaKnown RBP12.25□□□□□ -0.45
RBM28-206ENST00000487602 KIF14Q15058 1648 aa12.24□□□□□ -0.45
RBM28-206ENST00000487602 KCNH8Q96L42 1107 aa12.24□□□□□ -0.45
RBM28-206ENST00000487602 ASXL2Q76L83 1435 aa12.23□□□□□ -0.45
RBM28-206ENST00000487602 WDR7Q9Y4E6 1490 aa12.22□□□□□ -0.45
RBM28-206ENST00000487602 RRBP1Q9P2E9 1410 aaKnown RBP12.22□□□□□ -0.45
RBM28-206ENST00000487602 CCNB3Q8WWL7 1395 aa12.22□□□□□ -0.45
RBM28-206ENST00000487602 PCGF6Q9BYE7 350 aa12.22□□□□□ -0.45
RBM28-206ENST00000487602 ABCC10Q5T3U5 1492 aa12.21□□□□□ -0.45
RBM28-206ENST00000487602 MYOM3Q5VTT5 1437 aa12.21□□□□□ -0.45
RBM28-206ENST00000487602 PIAS4Q8N2W9 510 aaPredicted RBP12.21□□□□□ -0.45
RBM28-206ENST00000487602 DIP2BQ9P265 1576 aa12.2□□□□□ -0.46
RBM28-206ENST00000487602 FGD6Q6ZV73 1430 aa12.2□□□□□ -0.46
RBM28-206ENST00000487602 MIA2Q96PC5 1412 aa12.19□□□□□ -0.46
RBM28-206ENST00000487602 GPATCH8Q9UKJ3 1502 aaKnown RBP12.18□□□□□ -0.46
RBM28-206ENST00000487602 ITSN2Q9NZM3 1697 aa12.18□□□□□ -0.46
RBM28-206ENST00000487602 ABCA9Q8IUA7 1624 aa12.18□□□□□ -0.46
RBM28-206ENST00000487602 KIF13AQ9H1H9 1805 aa12.18□□□□□ -0.46
RBM28-206ENST00000487602 TTC37Q6PGP7 1564 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms