RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 CLIP1P30622 1438 aa23.1■■□□□ 1.29
GCA-210ENST00000487445 P3H3Q8IVL6 736 aa22.99■■□□□ 1.27
GCA-210ENST00000487445 KIAA0586Q9BVV6 1533 aa22.97■■□□□ 1.27
GCA-210ENST00000487445 NUP160Q12769 1436 aa22.97■■□□□ 1.27
GCA-210ENST00000487445 CEP170Q5SW79 1584 aa22.96■■□□□ 1.27
GCA-210ENST00000487445 CTTNBP2Q8WZ74 1663 aa22.94■■□□□ 1.26
GCA-210ENST00000487445 ARHGAP35Q9NRY4 1499 aa22.94■■□□□ 1.26
GCA-210ENST00000487445 IQGAP2Q13576 1575 aa22.92■■□□□ 1.26
GCA-210ENST00000487445 CHD1O14646 1710 aa22.9■■□□□ 1.26
GCA-210ENST00000487445 JPH4Q96JJ6 628 aa22.89■■□□□ 1.26
GCA-210ENST00000487445 ARAP1Q96P48 1450 aa22.88■■□□□ 1.25
GCA-210ENST00000487445 FHOD3Q2V2M9 1422 aa22.85■■□□□ 1.25
GCA-210ENST00000487445 EFCAB5A4FU69 1503 aa22.82■■□□□ 1.24
GCA-210ENST00000487445 OSCARQ8IYS5 282 aa22.82■■□□□ 1.24
GCA-210ENST00000487445 VPS8Q8N3P4 1428 aa22.82■■□□□ 1.24
GCA-210ENST00000487445 TTBK1Q5TCY1 1321 aaPredicted RBP22.81■■□□□ 1.24
GCA-210ENST00000487445 UGGT2Q9NYU1 1516 aa22.81■■□□□ 1.24
GCA-210ENST00000487445 SAMD9Q5K651 1589 aa22.75■■□□□ 1.23
GCA-210ENST00000487445 ATP1B4Q9UN42 357 aaPredicted RBP22.75■■□□□ 1.23
GCA-210ENST00000487445 DISP1Q96F81 1524 aa22.74■■□□□ 1.23
GCA-210ENST00000487445 CARMIL2Q6F5E8 1435 aa22.74■■□□□ 1.23
GCA-210ENST00000487445 PRG4Q92954 1404 aaPredicted RBP22.73■■□□□ 1.23
GCA-210ENST00000487445 PPARGC1BQ86YN6 1023 aaKnown RBP22.72■■□□□ 1.23
GCA-210ENST00000487445 APLP2Q06481 763 aa22.71■■□□□ 1.23
GCA-210ENST00000487445 CLASP1Q7Z460 1538 aa22.7■■□□□ 1.22
GCA-210ENST00000487445 FMN1Q68DA7 1419 aa22.7■■□□□ 1.22
GCA-210ENST00000487445 KIAA0556O60303 1618 aa22.68■■□□□ 1.22
GCA-210ENST00000487445 AEBP2Q6ZN18 517 aaPredicted RBP22.68■■□□□ 1.22
GCA-210ENST00000487445 SHROOM2Q13796 1616 aa22.6■■□□□ 1.21
GCA-210ENST00000487445 CASKIN1Q8WXD9 1431 aa22.59■■□□□ 1.21
GCA-210ENST00000487445 PTPRGP23470 1445 aa22.58■■□□□ 1.2
GCA-210ENST00000487445 ERCC6L2Q5T890 1561 aa22.57■■□□□ 1.2
GCA-210ENST00000487445 PCF11O94913 1555 aaKnown RBP22.56■■□□□ 1.2
GCA-210ENST00000487445 ARID3CA6NKF2 412 aa22.56■■□□□ 1.2
GCA-210ENST00000487445 FYCO1Q9BQS8 1478 aa22.54■■□□□ 1.2
GCA-210ENST00000487445 PLB1Q6P1J6 1458 aa22.51■■□□□ 1.19
GCA-210ENST00000487445 KANK4Q5T7N3 995 aaPredicted RBP22.5■■□□□ 1.19
GCA-210ENST00000487445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.47■■□□□ 1.19
GCA-210ENST00000487445 HNRNPUL2Q1KMD3 747 aaKnown RBP22.47■■□□□ 1.19
GCA-210ENST00000487445 HECW1Q76N89 1606 aa22.42■■□□□ 1.18
GCA-210ENST00000487445 RAPGEF6Q8TEU7 1601 aa22.41■■□□□ 1.18
GCA-210ENST00000487445 NUP153P49790 1475 aaKnown RBP22.41■■□□□ 1.18
GCA-210ENST00000487445 UACAQ9BZF9 1416 aa22.41■■□□□ 1.18
GCA-210ENST00000487445 TIAM1Q13009 1591 aa22.41■■□□□ 1.18
GCA-210ENST00000487445 EPRSP07814 1512 aaKnown RBP22.4■■□□□ 1.18
GCA-210ENST00000487445 MAP3K1Q13233 1512 aa22.39■■□□□ 1.18
GCA-210ENST00000487445 ABCA8O94911 1581 aa22.38■■□□□ 1.17
GCA-210ENST00000487445 CCDC18Q5T9S5 1454 aa22.37■■□□□ 1.17
GCA-210ENST00000487445 CDK13Q14004 1512 aaKnown RBP22.37■■□□□ 1.17
GCA-210ENST00000487445 MTUS2Q5JR59 1369 aa22.36■■□□□ 1.17
GCA-210ENST00000487445 LRRC9Q6ZRR7 1453 aa22.36■■□□□ 1.17
GCA-210ENST00000487445 TRIM26Q12899 539 aaPredicted RBP22.34■■□□□ 1.17
GCA-210ENST00000487445 ARHGEF11O15085 1522 aa22.34■■□□□ 1.17
GCA-210ENST00000487445 CDK11AQ9UQ88 783 aaPredicted RBP22.34■■□□□ 1.17
GCA-210ENST00000487445 PCGF6Q9BYE7 350 aa22.3■■□□□ 1.16
GCA-210ENST00000487445 ATP10BO94823 1461 aa22.3■■□□□ 1.16
GCA-210ENST00000487445 CFAP43Q8NDM7 1665 aa22.29■■□□□ 1.16
GCA-210ENST00000487445 ABCC2Q92887 1545 aa22.29■■□□□ 1.16
GCA-210ENST00000487445 LRRIQ1Q96JM4 1722 aa22.28■■□□□ 1.16
GCA-210ENST00000487445 CYB5RLQ6IPT4 315 aa22.28■■□□□ 1.16
GCA-210ENST00000487445 PLEKHD1A6NEE1 506 aa22.27■■□□□ 1.16
GCA-210ENST00000487445 UHRF1BP1LA0JNW5 1464 aa22.25■■□□□ 1.15
GCA-210ENST00000487445 MAGI3Q5TCQ9 1506 aa22.24■■□□□ 1.15
GCA-210ENST00000487445 NPM1P06748 294 aaKnown RBP eCLIP22.2■■□□□ 1.14
GCA-210ENST00000487445 EHBP1L1Q8N3D4 1523 aa22.2■■□□□ 1.14
GCA-210ENST00000487445 RIMBP3CA6NJZ7 1639 aa22.2■■□□□ 1.14
GCA-210ENST00000487445 RIMBP3BA6NNM3 1639 aa22.2■■□□□ 1.14
GCA-210ENST00000487445 RIMBP3Q9UFD9 1639 aa22.2■■□□□ 1.14
GCA-210ENST00000487445 PHLDB1Q86UU1 1377 aa22.18■■□□□ 1.14
GCA-210ENST00000487445 TROQ12816 1431 aaPredicted RBP22.18■■□□□ 1.14
GCA-210ENST00000487445 ADCY10Q96PN6 1610 aa22.17■■□□□ 1.14
GCA-210ENST00000487445 KDM5BQ9UGL1 1544 aa22.17■■□□□ 1.14
GCA-210ENST00000487445 NCOA2Q15596 1464 aa22.16■■□□□ 1.14
GCA-210ENST00000487445 KCNH8Q96L42 1107 aa22.14■■□□□ 1.13
GCA-210ENST00000487445 ZCCHC11Q5TAX3 1644 aaKnown RBP22.09■■□□□ 1.13
GCA-210ENST00000487445 SUPT6HQ7KZ85 1726 aaKnown RBP22.09■■□□□ 1.13
GCA-210ENST00000487445 CCNB3Q8WWL7 1395 aa22.07■■□□□ 1.12
GCA-210ENST00000487445 FAM50AQ14320 339 aaKnown RBP22.07■■□□□ 1.12
GCA-210ENST00000487445 RRBP1Q9P2E9 1410 aaKnown RBP22.05■■□□□ 1.12
GCA-210ENST00000487445 MYOM3Q5VTT5 1437 aa22.05■■□□□ 1.12
GCA-210ENST00000487445 ASXL2Q76L83 1435 aa22.02■■□□□ 1.12
GCA-210ENST00000487445 ITGAEP38570 1179 aa22.02■■□□□ 1.12
GCA-210ENST00000487445 KIF14Q15058 1648 aa22.02■■□□□ 1.12
GCA-210ENST00000487445 FGD6Q6ZV73 1430 aa22.02■■□□□ 1.11
GCA-210ENST00000487445 WDR7Q9Y4E6 1490 aa22■■□□□ 1.11
GCA-210ENST00000487445 CFDP1Q9UEE9 299 aaPredicted RBP22■■□□□ 1.11
GCA-210ENST00000487445 ZNF777Q9ULD5 760 aaPredicted RBP21.97■■□□□ 1.11
GCA-210ENST00000487445 DNAJC5Q9H3Z4 198 aa21.96■■□□□ 1.11
GCA-210ENST00000487445 ABCC10Q5T3U5 1492 aa21.96■■□□□ 1.11
GCA-210ENST00000487445 GPATCH8Q9UKJ3 1502 aaKnown RBP21.96■■□□□ 1.11
GCA-210ENST00000487445 MIA2Q96PC5 1412 aa21.94■■□□□ 1.1
GCA-210ENST00000487445 ZNF644Q9H582 1327 aaPredicted RBP21.93■■□□□ 1.1
GCA-210ENST00000487445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.92■■□□□ 1.1
GCA-210ENST00000487445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.88■■□□□ 1.09
GCA-210ENST00000487445 TTC37Q6PGP7 1564 aa21.88■■□□□ 1.09
GCA-210ENST00000487445 PTPN23Q9H3S7 1636 aa21.87■■□□□ 1.09
GCA-210ENST00000487445 MAPKBP1O60336 1514 aa21.85■■□□□ 1.09
GCA-210ENST00000487445 TCOF1Q13428 1488 aaKnown RBP21.84■■□□□ 1.09
GCA-210ENST00000487445 PLCH2O75038 1416 aa21.83■■□□□ 1.09
GCA-210ENST00000487445 EFCAB2Q5VUJ9 269 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms