RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 TRHP20396 242 aaPredicted RBP21.32■■□□□ 1
ITSN1-229ENST00000487427 CARMIL1Q5VZK9 1371 aa21.31■■□□□ 1
ITSN1-229ENST00000487427 ERCC6L2Q5T890 1561 aa21.3■■□□□ 1
ITSN1-229ENST00000487427 SHROOM2Q13796 1616 aa21.29■■□□□ 1
ITSN1-229ENST00000487427 PRG4Q92954 1404 aaPredicted RBP21.29■■□□□ 1
ITSN1-229ENST00000487427 CUL7Q14999 1698 aa21.25■□□□□ 0.99
ITSN1-229ENST00000487427 KIAA0586Q9BVV6 1533 aa21.24■□□□□ 0.99
ITSN1-229ENST00000487427 PLPPR3Q6T4P5 718 aa21.23■□□□□ 0.99
ITSN1-229ENST00000487427 RUSC2Q8N2Y8 1516 aa21.19■□□□□ 0.98
ITSN1-229ENST00000487427 RAPGEF2Q9Y4G8 1499 aa21.11■□□□□ 0.97
ITSN1-229ENST00000487427 NPM1P06748 294 aaKnown RBP eCLIP21.06■□□□□ 0.96
ITSN1-229ENST00000487427 CARMIL2Q6F5E8 1435 aa21.04■□□□□ 0.96
ITSN1-229ENST00000487427 PTPRGP23470 1445 aa21.03■□□□□ 0.96
ITSN1-229ENST00000487427 IQGAP2Q13576 1575 aa21.01■□□□□ 0.95
ITSN1-229ENST00000487427 TNIKQ9UKE5 1360 aa20.99■□□□□ 0.95
ITSN1-229ENST00000487427 TTBK1Q5TCY1 1321 aaPredicted RBP20.97■□□□□ 0.95
ITSN1-229ENST00000487427 PRXQ9BXM0 1461 aa20.96■□□□□ 0.95
ITSN1-229ENST00000487427 CSRNP3Q8WYN3 585 aa20.95■□□□□ 0.94
ITSN1-229ENST00000487427 DISP1Q96F81 1524 aa20.92■□□□□ 0.94
ITSN1-229ENST00000487427 UGGT2Q9NYU1 1516 aa20.92■□□□□ 0.94
ITSN1-229ENST00000487427 ADCY10Q96PN6 1610 aa20.9■□□□□ 0.94
ITSN1-229ENST00000487427 FAM69CQ0P6D2 419 aa20.89■□□□□ 0.93
ITSN1-229ENST00000487427 MAPKBP1O60336 1514 aa20.86■□□□□ 0.93
ITSN1-229ENST00000487427 EEA1Q15075 1411 aa20.86■□□□□ 0.93
ITSN1-229ENST00000487427 ABCC10Q5T3U5 1492 aa20.85■□□□□ 0.93
ITSN1-229ENST00000487427 UACAQ9BZF9 1416 aa20.85■□□□□ 0.93
ITSN1-229ENST00000487427 UHRF1BP1LA0JNW5 1464 aa20.82■□□□□ 0.92
ITSN1-229ENST00000487427 ABCC2Q92887 1545 aa20.82■□□□□ 0.92
ITSN1-229ENST00000487427 GOLGA3Q08378 1498 aa20.81■□□□□ 0.92
ITSN1-229ENST00000487427 FAM9AQ8IZU1 332 aaPredicted RBP20.79■□□□□ 0.92
ITSN1-229ENST00000487427 KIAA0556O60303 1618 aa20.78■□□□□ 0.92
ITSN1-229ENST00000487427 CTTNBP2Q8WZ74 1663 aa20.76■□□□□ 0.91
ITSN1-229ENST00000487427 KIF13AQ9H1H9 1805 aa20.74■□□□□ 0.91
ITSN1-229ENST00000487427 FOXD1Q16676 465 aa20.74■□□□□ 0.91
ITSN1-229ENST00000487427 ASXL2Q76L83 1435 aa20.73■□□□□ 0.91
ITSN1-229ENST00000487427 PLB1Q6P1J6 1458 aa20.73■□□□□ 0.91
ITSN1-229ENST00000487427 KDM5BQ9UGL1 1544 aa20.72■□□□□ 0.91
ITSN1-229ENST00000487427 DIP2BQ9P265 1576 aa20.72■□□□□ 0.91
ITSN1-229ENST00000487427 P3H3Q8IVL6 736 aa20.69■□□□□ 0.9
ITSN1-229ENST00000487427 ABCA8O94911 1581 aa20.61■□□□□ 0.89
ITSN1-229ENST00000487427 RANGAP1P46060 587 aaPredicted RBP20.61■□□□□ 0.89
ITSN1-229ENST00000487427 GLI2P10070 1586 aa20.59■□□□□ 0.89
ITSN1-229ENST00000487427 EPRSP07814 1512 aaKnown RBP20.58■□□□□ 0.89
ITSN1-229ENST00000487427 ZCCHC11Q5TAX3 1644 aaKnown RBP20.58■□□□□ 0.89
ITSN1-229ENST00000487427 KIF21BO75037 1637 aa20.57■□□□□ 0.88
ITSN1-229ENST00000487427 UBTFP17480 764 aaKnown RBP20.56■□□□□ 0.88
ITSN1-229ENST00000487427 WDR7Q9Y4E6 1490 aa20.56■□□□□ 0.88
ITSN1-229ENST00000487427 SAMD9Q5K651 1589 aa20.55■□□□□ 0.88
ITSN1-229ENST00000487427 KCNH8Q96L42 1107 aa20.54■□□□□ 0.88
ITSN1-229ENST00000487427 EHMT2Q96KQ7 1210 aa20.53■□□□□ 0.88
ITSN1-229ENST00000487427 ARID3CA6NKF2 412 aa20.52■□□□□ 0.88
ITSN1-229ENST00000487427 ATP10BO94823 1461 aa20.51■□□□□ 0.87
ITSN1-229ENST00000487427 TSPOAP1O95153 1857 aa20.5■□□□□ 0.87
ITSN1-229ENST00000487427 FHOD3Q2V2M9 1422 aa20.48■□□□□ 0.87
ITSN1-229ENST00000487427 KDM6BO15054 1643 aa20.48■□□□□ 0.87
ITSN1-229ENST00000487427 TEX14Q8IWB6 1497 aa20.45■□□□□ 0.86
ITSN1-229ENST00000487427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.45■□□□□ 0.86
ITSN1-229ENST00000487427 HNRNPUL2Q1KMD3 747 aaKnown RBP20.45■□□□□ 0.86
ITSN1-229ENST00000487427 CD109Q6YHK3 1445 aa20.44■□□□□ 0.86
ITSN1-229ENST00000487427 EFCAB5A4FU69 1503 aa20.44■□□□□ 0.86
ITSN1-229ENST00000487427 MAP3K4Q9Y6R4 1608 aa20.44■□□□□ 0.86
ITSN1-229ENST00000487427 PPRC1Q5VV67 1664 aaKnown RBP20.42■□□□□ 0.86
ITSN1-229ENST00000487427 RAPGEF6Q8TEU7 1601 aa20.42■□□□□ 0.86
ITSN1-229ENST00000487427 NUP153P49790 1475 aaKnown RBP20.4■□□□□ 0.86
ITSN1-229ENST00000487427 COL17A1Q9UMD9 1497 aaPredicted RBP20.39■□□□□ 0.85
ITSN1-229ENST00000487427 MAGI3Q5TCQ9 1506 aa20.38■□□□□ 0.85
ITSN1-229ENST00000487427 PLEKHD1A6NEE1 506 aa20.38■□□□□ 0.85
ITSN1-229ENST00000487427 CFAP43Q8NDM7 1665 aa20.32■□□□□ 0.84
ITSN1-229ENST00000487427 ARHGAP35Q9NRY4 1499 aa20.32■□□□□ 0.84
ITSN1-229ENST00000487427 FMN1Q68DA7 1419 aa20.32■□□□□ 0.84
ITSN1-229ENST00000487427 ATP1B4Q9UN42 357 aaPredicted RBP20.3■□□□□ 0.84
ITSN1-229ENST00000487427 PHLDB1Q86UU1 1377 aa20.28■□□□□ 0.84
ITSN1-229ENST00000487427 KDM4FA0A1W2PPD8 638 aa20.26■□□□□ 0.83
ITSN1-229ENST00000487427 ABCA9Q8IUA7 1624 aa20.26■□□□□ 0.83
ITSN1-229ENST00000487427 CDK11AQ9UQ88 783 aaPredicted RBP20.23■□□□□ 0.83
ITSN1-229ENST00000487427 ARAP3Q8WWN8 1544 aa20.22■□□□□ 0.83
ITSN1-229ENST00000487427 PPP6R1Q9UPN7 881 aa20.22■□□□□ 0.83
ITSN1-229ENST00000487427 NEO1Q92859 1461 aa20.19■□□□□ 0.82
ITSN1-229ENST00000487427 CDK13Q14004 1512 aaKnown RBP20.19■□□□□ 0.82
ITSN1-229ENST00000487427 ADRA2BP18089 450 aa20.18■□□□□ 0.82
ITSN1-229ENST00000487427 RAPGEF3O95398 923 aa20.17■□□□□ 0.82
ITSN1-229ENST00000487427 HECW1Q76N89 1606 aa20.16■□□□□ 0.82
ITSN1-229ENST00000487427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.14■□□□□ 0.81
ITSN1-229ENST00000487427 CLIP1P30622 1438 aa20.14■□□□□ 0.81
ITSN1-229ENST00000487427 CASKIN1Q8WXD9 1431 aa20.12■□□□□ 0.81
ITSN1-229ENST00000487427 AKNAQ7Z591 1439 aa20.1■□□□□ 0.81
ITSN1-229ENST00000487427 FANCAO15360 1455 aa20.1■□□□□ 0.81
ITSN1-229ENST00000487427 ADGRL1O94910 1474 aa20.1■□□□□ 0.81
ITSN1-229ENST00000487427 PLCH2O75038 1416 aa20.09■□□□□ 0.81
ITSN1-229ENST00000487427 TROQ12816 1431 aaPredicted RBP20.09■□□□□ 0.81
ITSN1-229ENST00000487427 EFCAB2Q5VUJ9 269 aa20.07■□□□□ 0.8
ITSN1-229ENST00000487427 DENND4BO75064 1496 aaPredicted RBP20.06■□□□□ 0.8
ITSN1-229ENST00000487427 TTC37Q6PGP7 1564 aa20.06■□□□□ 0.8
ITSN1-229ENST00000487427 CCDC18Q5T9S5 1454 aa20.04■□□□□ 0.8
ITSN1-229ENST00000487427 FYCO1Q9BQS8 1478 aa20.02■□□□□ 0.8
ITSN1-229ENST00000487427 PCF11O94913 1555 aaKnown RBP20.01■□□□□ 0.79
ITSN1-229ENST00000487427 CFAP74Q9C0B2 1584 aa20■□□□□ 0.79
ITSN1-229ENST00000487427 SCAPERQ9BY12 1400 aa20■□□□□ 0.79
ITSN1-229ENST00000487427 FRMPD1Q5SYB0 1578 aa19.98■□□□□ 0.79
ITSN1-229ENST00000487427 KIF14Q15058 1648 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms