RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 ABCC10Q5T3U5 1492 aa27.05■■□□□ 1.92
PFDN4-204ENST00000487129 SUPT5HO00267 1087 aaKnown RBP27.04■■□□□ 1.92
PFDN4-204ENST00000487129 MAPKBP1O60336 1514 aa27.01■■□□□ 1.91
PFDN4-204ENST00000487129 DIP2BQ9P265 1576 aa26.98■■□□□ 1.91
PFDN4-204ENST00000487129 FAM69CQ0P6D2 419 aa26.97■■□□□ 1.91
PFDN4-204ENST00000487129 ADCY10Q96PN6 1610 aa26.97■■□□□ 1.91
PFDN4-204ENST00000487129 KDM4FA0A1W2PPD8 638 aa26.84■■□□□ 1.89
PFDN4-204ENST00000487129 NPM1P06748 294 aaKnown RBP eCLIP26.83■■□□□ 1.89
PFDN4-204ENST00000487129 KIAA0586Q9BVV6 1533 aa26.83■■□□□ 1.89
PFDN4-204ENST00000487129 KDM6BO15054 1643 aa26.81■■□□□ 1.88
PFDN4-204ENST00000487129 IGF1RP08069 1367 aa26.77■■□□□ 1.88
PFDN4-204ENST00000487129 TSPOAP1O95153 1857 aa26.7■■□□□ 1.86
PFDN4-204ENST00000487129 CUL7Q14999 1698 aa26.69■■□□□ 1.86
PFDN4-204ENST00000487129 CHIC1Q5VXU3 224 aa26.67■■□□□ 1.86
PFDN4-204ENST00000487129 KIF27Q86VH2 1401 aa26.65■■□□□ 1.86
PFDN4-204ENST00000487129 PTPRGP23470 1445 aa26.64■■□□□ 1.85
PFDN4-204ENST00000487129 ABCC2Q92887 1545 aa26.61■■□□□ 1.85
PFDN4-204ENST00000487129 PPRC1Q5VV67 1664 aaKnown RBP26.6■■□□□ 1.85
PFDN4-204ENST00000487129 GLI2P10070 1586 aa26.57■■□□□ 1.84
PFDN4-204ENST00000487129 ASXL2Q76L83 1435 aa26.56■■□□□ 1.84
PFDN4-204ENST00000487129 TNIKQ9UKE5 1360 aa26.56■■□□□ 1.84
PFDN4-204ENST00000487129 CARMIL1Q5VZK9 1371 aa26.53■■□□□ 1.84
PFDN4-204ENST00000487129 UHRF1BP1LA0JNW5 1464 aa26.52■■□□□ 1.84
PFDN4-204ENST00000487129 PLB1Q6P1J6 1458 aa26.52■■□□□ 1.84
PFDN4-204ENST00000487129 COL17A1Q9UMD9 1497 aaPredicted RBP26.5■■□□□ 1.83
PFDN4-204ENST00000487129 CARMIL2Q6F5E8 1435 aa26.5■■□□□ 1.83
PFDN4-204ENST00000487129 TTBK1Q5TCY1 1321 aaPredicted RBP26.48■■□□□ 1.83
PFDN4-204ENST00000487129 ILDR1Q86SU0 546 aaPredicted RBP26.48■■□□□ 1.83
PFDN4-204ENST00000487129 IQGAP2Q13576 1575 aa26.48■■□□□ 1.83
PFDN4-204ENST00000487129 ADGRL1O94910 1474 aa26.48■■□□□ 1.83
PFDN4-204ENST00000487129 DISP1Q96F81 1524 aa26.46■■□□□ 1.83
PFDN4-204ENST00000487129 UACAQ9BZF9 1416 aa26.44■■□□□ 1.82
PFDN4-204ENST00000487129 KDM5BQ9UGL1 1544 aa26.42■■□□□ 1.82
PFDN4-204ENST00000487129 EPRSP07814 1512 aaKnown RBP26.41■■□□□ 1.82
PFDN4-204ENST00000487129 MAP3K4Q9Y6R4 1608 aa26.4■■□□□ 1.82
PFDN4-204ENST00000487129 UGGT2Q9NYU1 1516 aa26.34■■□□□ 1.81
PFDN4-204ENST00000487129 ZCCHC11Q5TAX3 1644 aaKnown RBP26.32■■□□□ 1.8
PFDN4-204ENST00000487129 TEX14Q8IWB6 1497 aa26.29■■□□□ 1.8
PFDN4-204ENST00000487129 HECW2Q9P2P5 1572 aa26.28■■□□□ 1.8
PFDN4-204ENST00000487129 KIAA0556O60303 1618 aa26.28■■□□□ 1.8
PFDN4-204ENST00000487129 RAPGEF2Q9Y4G8 1499 aa26.23■■□□□ 1.79
PFDN4-204ENST00000487129 WDR7Q9Y4E6 1490 aa26.22■■□□□ 1.79
PFDN4-204ENST00000487129 MAGI3Q5TCQ9 1506 aa26.14■■□□□ 1.77
PFDN4-204ENST00000487129 ABCA8O94911 1581 aa26.09■■□□□ 1.77
PFDN4-204ENST00000487129 CD109Q6YHK3 1445 aa26.08■■□□□ 1.77
PFDN4-204ENST00000487129 CFAP43Q8NDM7 1665 aa26.07■■□□□ 1.76
PFDN4-204ENST00000487129 CTTNBP2Q8WZ74 1663 aa26.03■■□□□ 1.76
PFDN4-204ENST00000487129 GOLGA3Q08378 1498 aa25.98■■□□□ 1.75
PFDN4-204ENST00000487129 KCNH8Q96L42 1107 aa25.98■■□□□ 1.75
PFDN4-204ENST00000487129 KIF21BO75037 1637 aa25.98■■□□□ 1.75
PFDN4-204ENST00000487129 ARAP3Q8WWN8 1544 aa25.95■■□□□ 1.74
PFDN4-204ENST00000487129 PRXQ9BXM0 1461 aa25.91■■□□□ 1.74
PFDN4-204ENST00000487129 ATP10BO94823 1461 aa25.86■■□□□ 1.73
PFDN4-204ENST00000487129 ADAMTSL3P82987 1691 aa25.84■■□□□ 1.73
PFDN4-204ENST00000487129 ABCA9Q8IUA7 1624 aa25.83■■□□□ 1.73
PFDN4-204ENST00000487129 PTPRMP28827 1452 aa25.82■■□□□ 1.72
PFDN4-204ENST00000487129 FBXO41Q8TF61 875 aa25.79■■□□□ 1.72
PFDN4-204ENST00000487129 ARID3CA6NKF2 412 aa25.78■■□□□ 1.72
PFDN4-204ENST00000487129 PHLDB1Q86UU1 1377 aa25.77■■□□□ 1.72
PFDN4-204ENST00000487129 FRMPD1Q5SYB0 1578 aa25.76■■□□□ 1.71
PFDN4-204ENST00000487129 RAPGEF3O95398 923 aa25.74■■□□□ 1.71
PFDN4-204ENST00000487129 NEO1Q92859 1461 aa25.72■■□□□ 1.71
PFDN4-204ENST00000487129 P3H3Q8IVL6 736 aa25.71■■□□□ 1.71
PFDN4-204ENST00000487129 BCORL1Q5H9F3 1711 aa25.71■■□□□ 1.71
PFDN4-204ENST00000487129 SAMD9Q5K651 1589 aa25.7■■□□□ 1.71
PFDN4-204ENST00000487129 LMTK3Q96Q04 1460 aa25.67■■□□□ 1.7
PFDN4-204ENST00000487129 MADDQ8WXG6 1647 aa25.67■■□□□ 1.7
PFDN4-204ENST00000487129 PCF11O94913 1555 aaKnown RBP25.67■■□□□ 1.7
PFDN4-204ENST00000487129 RAPGEF6Q8TEU7 1601 aa25.66■■□□□ 1.7
PFDN4-204ENST00000487129 NUP153P49790 1475 aaKnown RBP25.62■■□□□ 1.69
PFDN4-204ENST00000487129 ARHGEF40Q8TER5 1519 aa25.61■■□□□ 1.69
PFDN4-204ENST00000487129 RICTORQ6R327 1708 aa25.55■■□□□ 1.68
PFDN4-204ENST00000487129 FAM9AQ8IZU1 332 aaPredicted RBP25.54■■□□□ 1.68
PFDN4-204ENST00000487129 RIMS1Q86UR5 1692 aaKnown RBP25.53■■□□□ 1.68
PFDN4-204ENST00000487129 ARID4BQ4LE39 1312 aaPredicted RBP25.53■■□□□ 1.68
PFDN4-204ENST00000487129 FHOD3Q2V2M9 1422 aa25.53■■□□□ 1.68
PFDN4-204ENST00000487129 DENND4BO75064 1496 aaPredicted RBP25.52■■□□□ 1.68
PFDN4-204ENST00000487129 SIGLEC1Q9BZZ2 1709 aa25.51■■□□□ 1.67
PFDN4-204ENST00000487129 AKNAQ7Z591 1439 aa25.49■■□□□ 1.67
PFDN4-204ENST00000487129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.48■■□□□ 1.67
PFDN4-204ENST00000487129 HNRNPUL2Q1KMD3 747 aaKnown RBP25.48■■□□□ 1.67
PFDN4-204ENST00000487129 ZMYM4Q5VZL5 1548 aa25.47■■□□□ 1.67
PFDN4-204ENST00000487129 CSRNP3Q8WYN3 585 aa25.47■■□□□ 1.67
PFDN4-204ENST00000487129 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.47■■□□□ 1.67
PFDN4-204ENST00000487129 FANCAO15360 1455 aa25.47■■□□□ 1.67
PFDN4-204ENST00000487129 YEATS2Q9ULM3 1422 aa25.45■■□□□ 1.66
PFDN4-204ENST00000487129 HSPA2P54652 639 aa25.44■■□□□ 1.66
PFDN4-204ENST00000487129 TTC37Q6PGP7 1564 aa25.44■■□□□ 1.66
PFDN4-204ENST00000487129 CFAP74Q9C0B2 1584 aa25.41■■□□□ 1.66
PFDN4-204ENST00000487129 ZFYVE16Q7Z3T8 1539 aa25.4■■□□□ 1.66
PFDN4-204ENST00000487129 PLEKHD1A6NEE1 506 aa25.39■■□□□ 1.66
PFDN4-204ENST00000487129 EFCAB5A4FU69 1503 aa25.37■■□□□ 1.65
PFDN4-204ENST00000487129 POGZQ7Z3K3 1410 aa25.37■■□□□ 1.65
PFDN4-204ENST00000487129 MAGI2Q86UL8 1455 aa25.36■■□□□ 1.65
PFDN4-204ENST00000487129 HECW1Q76N89 1606 aa25.35■■□□□ 1.65
PFDN4-204ENST00000487129 RANGAP1P46060 587 aaPredicted RBP25.33■■□□□ 1.65
PFDN4-204ENST00000487129 CERKQ8TCT0 537 aa25.3■■□□□ 1.64
PFDN4-204ENST00000487129 CDK13Q14004 1512 aaKnown RBP25.3■■□□□ 1.64
PFDN4-204ENST00000487129 FER1L4A9Z1Z3 1794 aa25.29■■□□□ 1.64
PFDN4-204ENST00000487129 ARHGEF12Q9NZN5 1544 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms