RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 TIAM1Q13009 1591 aa26.81■■□□□ 1.88
PDLIM7-207ENST00000486828 DIEXFQ68CQ4 756 aaKnown RBP26.8■■□□□ 1.88
PDLIM7-207ENST00000486828 WDR97A6NE52 1622 aa26.8■■□□□ 1.88
PDLIM7-207ENST00000486828 TDRD9Q8NDG6 1382 aaKnown RBP26.77■■□□□ 1.88
PDLIM7-207ENST00000486828 FHAD1B1AJZ9 1412 aa26.76■■□□□ 1.87
PDLIM7-207ENST00000486828 CCNB3Q8WWL7 1395 aa26.75■■□□□ 1.87
PDLIM7-207ENST00000486828 ZNF316A6NFI3 1004 aaPredicted RBP26.75■■□□□ 1.87
PDLIM7-207ENST00000486828 ZNF608Q9ULD9 1512 aaPredicted RBP26.74■■□□□ 1.87
PDLIM7-207ENST00000486828 CLSPNQ9HAW4 1339 aa26.72■■□□□ 1.87
PDLIM7-207ENST00000486828 EFCAB5A4FU69 1503 aa26.71■■□□□ 1.87
PDLIM7-207ENST00000486828 CTTNBP2Q8WZ74 1663 aa26.7■■□□□ 1.86
PDLIM7-207ENST00000486828 DHX57Q6P158 1386 aaKnown RBP26.69■■□□□ 1.86
PDLIM7-207ENST00000486828 AQRO60306 1485 aaKnown RBP eCLIP26.69■■□□□ 1.866e-8■■■■■ 29.2
PDLIM7-207ENST00000486828 ABCA5Q8WWZ7 1642 aa26.69■■□□□ 1.86
PDLIM7-207ENST00000486828 CFAP43Q8NDM7 1665 aa26.68■■□□□ 1.86
PDLIM7-207ENST00000486828 LRRC9Q6ZRR7 1453 aa26.68■■□□□ 1.86
PDLIM7-207ENST00000486828 PCF11O94913 1555 aaKnown RBP26.67■■□□□ 1.86
PDLIM7-207ENST00000486828 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
PDLIM7-207ENST00000486828 EIF4G3O43432 1585 aaKnown RBP26.62■■□□□ 1.85
PDLIM7-207ENST00000486828 FHOD3Q2V2M9 1422 aa26.61■■□□□ 1.85
PDLIM7-207ENST00000486828 FYCO1Q9BQS8 1478 aa26.6■■□□□ 1.85
PDLIM7-207ENST00000486828 P3H3Q8IVL6 736 aa26.59■■□□□ 1.85
PDLIM7-207ENST00000486828 CASKIN1Q8WXD9 1431 aa26.56■■□□□ 1.84
PDLIM7-207ENST00000486828 GRIN2BQ13224 1484 aa26.55■■□□□ 1.84
PDLIM7-207ENST00000486828 PHLDB1Q86UU1 1377 aa26.53■■□□□ 1.84
PDLIM7-207ENST00000486828 PBRM1Q86U86 1689 aa26.52■■□□□ 1.84
PDLIM7-207ENST00000486828 FMN1Q68DA7 1419 aa26.5■■□□□ 1.83
PDLIM7-207ENST00000486828 SAMD9Q5K651 1589 aa26.48■■□□□ 1.83
PDLIM7-207ENST00000486828 ITGAEP38570 1179 aa26.47■■□□□ 1.83
PDLIM7-207ENST00000486828 ATP1B4Q9UN42 357 aaPredicted RBP26.44■■□□□ 1.82
PDLIM7-207ENST00000486828 SNAPC4Q5SXM2 1469 aa26.44■■□□□ 1.82
PDLIM7-207ENST00000486828 SCAF1Q9H7N4 1312 aaKnown RBP26.44■■□□□ 1.82
PDLIM7-207ENST00000486828 RAB3GAP2Q9H2M9 1393 aa26.42■■□□□ 1.82
PDLIM7-207ENST00000486828 MAGI1Q96QZ7 1491 aaPredicted RBP26.39■■□□□ 1.82
PDLIM7-207ENST00000486828 ACIN1Q9UKV3 1341 aaKnown RBP26.39■■□□□ 1.81
PDLIM7-207ENST00000486828 SETD5Q9C0A6 1442 aa26.38■■□□□ 1.81
PDLIM7-207ENST00000486828 ADAMTS12P58397 1594 aa26.37■■□□□ 1.81
PDLIM7-207ENST00000486828 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.35■■□□□ 1.814e-6■■■□□ 19.1
PDLIM7-207ENST00000486828 FAM50AQ14320 339 aaKnown RBP26.34■■□□□ 1.81
PDLIM7-207ENST00000486828 CENPBP07199 599 aaPredicted RBP26.33■■□□□ 1.81
PDLIM7-207ENST00000486828 NEUROD1Q13562 356 aa26.31■■□□□ 1.8
PDLIM7-207ENST00000486828 MAPKBP1O60336 1514 aa26.3■■□□□ 1.8
PDLIM7-207ENST00000486828 SYNJ2O15056 1496 aa26.29■■□□□ 1.8
PDLIM7-207ENST00000486828 LRRIQ1Q96JM4 1722 aa26.28■■□□□ 1.8
PDLIM7-207ENST00000486828 CHMP7Q8WUX9 453 aaPredicted RBP26.26■■□□□ 1.79
PDLIM7-207ENST00000486828 FBLN2P98095 1184 aa26.25■■□□□ 1.79
PDLIM7-207ENST00000486828 MTUS2Q5JR59 1369 aa26.24■■□□□ 1.79
PDLIM7-207ENST00000486828 MIER1Q8N108 512 aa26.24■■□□□ 1.79
PDLIM7-207ENST00000486828 FGD6Q6ZV73 1430 aa26.24■■□□□ 1.79
PDLIM7-207ENST00000486828 GRIN2AQ12879 1464 aa26.22■■□□□ 1.79
PDLIM7-207ENST00000486828 IQGAP2Q13576 1575 aa26.2■■□□□ 1.79
PDLIM7-207ENST00000486828 EHBP1L1Q8N3D4 1523 aa26.18■■□□□ 1.78
PDLIM7-207ENST00000486828 SUPT6HQ7KZ85 1726 aaKnown RBP26.16■■□□□ 1.78
PDLIM7-207ENST00000486828 NCOA2Q15596 1464 aa26.15■■□□□ 1.78
PDLIM7-207ENST00000486828 CCDC18Q5T9S5 1454 aa26.15■■□□□ 1.78
PDLIM7-207ENST00000486828 CHD1O14646 1710 aa26.14■■□□□ 1.77
PDLIM7-207ENST00000486828 MYOM3Q5VTT5 1437 aa26.12■■□□□ 1.77
PDLIM7-207ENST00000486828 HECW1Q76N89 1606 aa26.11■■□□□ 1.77
PDLIM7-207ENST00000486828 ARHGEF11O15085 1522 aa26.09■■□□□ 1.77
PDLIM7-207ENST00000486828 UGGT2Q9NYU1 1516 aa26.08■■□□□ 1.77
PDLIM7-207ENST00000486828 MAGI3Q5TCQ9 1506 aa26.07■■□□□ 1.76
PDLIM7-207ENST00000486828 NUP160Q12769 1436 aa26.06■■□□□ 1.76
PDLIM7-207ENST00000486828 CEP170Q5SW79 1584 aa26.06■■□□□ 1.76
PDLIM7-207ENST00000486828 OSCARQ8IYS5 282 aa26.06■■□□□ 1.76
PDLIM7-207ENST00000486828 HFM1A2PYH4 1435 aa26.04■■□□□ 1.76
PDLIM7-207ENST00000486828 PTPRKQ15262 1439 aa26.03■■□□□ 1.76
PDLIM7-207ENST00000486828 EPRSP07814 1512 aaKnown RBP26.01■■□□□ 1.75
PDLIM7-207ENST00000486828 YTHDC1Q96MU7 727 aaKnown RBP26.01■■□□□ 1.75
PDLIM7-207ENST00000486828 PTPN23Q9H3S7 1636 aa26.01■■□□□ 1.75
PDLIM7-207ENST00000486828 TIMELESSQ9UNS1 1208 aa26.01■■□□□ 1.75
PDLIM7-207ENST00000486828 GTF3C3Q9Y5Q9 886 aa26■■□□□ 1.75
PDLIM7-207ENST00000486828 KIAA0586Q9BVV6 1533 aa25.99■■□□□ 1.75
PDLIM7-207ENST00000486828 SIN3AQ96ST3 1273 aa25.98■■□□□ 1.75
PDLIM7-207ENST00000486828 TCOF1Q13428 1488 aaKnown RBP25.96■■□□□ 1.75
PDLIM7-207ENST00000486828 NAIPQ13075 1403 aa25.94■■□□□ 1.74
PDLIM7-207ENST00000486828 UACAQ9BZF9 1416 aa25.94■■□□□ 1.74
PDLIM7-207ENST00000486828 KIAA0556O60303 1618 aa25.93■■□□□ 1.74
PDLIM7-207ENST00000486828 CDK13Q14004 1512 aaKnown RBP25.93■■□□□ 1.74
PDLIM7-207ENST00000486828 DISP1Q96F81 1524 aa25.9■■□□□ 1.74
PDLIM7-207ENST00000486828 DNAJC5Q9H3Z4 198 aa25.88■■□□□ 1.73
PDLIM7-207ENST00000486828 CLASP1Q7Z460 1538 aa25.87■■□□□ 1.73
PDLIM7-207ENST00000486828 MIA2Q96PC5 1412 aa25.87■■□□□ 1.73
PDLIM7-207ENST00000486828 PELP1Q8IZL8 1130 aaKnown RBP25.84■■□□□ 1.73
PDLIM7-207ENST00000486828 JPH4Q96JJ6 628 aa25.84■■□□□ 1.73
PDLIM7-207ENST00000486828 GCC2Q8IWJ2 1684 aa25.83■■□□□ 1.73
PDLIM7-207ENST00000486828 AKNAQ7Z591 1439 aa25.82■■□□□ 1.72
PDLIM7-207ENST00000486828 PPP1R15AO75807 674 aaPredicted RBP25.81■■□□□ 1.72
PDLIM7-207ENST00000486828 RAPGEF6Q8TEU7 1601 aa25.8■■□□□ 1.72
PDLIM7-207ENST00000486828 NUP153P49790 1475 aaKnown RBP25.78■■□□□ 1.72
PDLIM7-207ENST00000486828 SHROOM2Q13796 1616 aa25.76■■□□□ 1.71
PDLIM7-207ENST00000486828 TONSLQ96HA7 1378 aa25.75■■□□□ 1.71
PDLIM7-207ENST00000486828 ARID3CA6NKF2 412 aa25.74■■□□□ 1.71
PDLIM7-207ENST00000486828 PRG4Q92954 1404 aaPredicted RBP25.72■■□□□ 1.71
PDLIM7-207ENST00000486828 RRP7BPQ9NSQ0 103 aa25.71■■□□□ 1.71
PDLIM7-207ENST00000486828 CHIC2Q9UKJ5 165 aa25.7■■□□□ 1.7
PDLIM7-207ENST00000486828 CARMIL2Q6F5E8 1435 aa25.68■■□□□ 1.7
PDLIM7-207ENST00000486828 CDK11AQ9UQ88 783 aaPredicted RBP25.67■■□□□ 1.7
PDLIM7-207ENST00000486828 KDM6BO15054 1643 aa25.66■■□□□ 1.7
PDLIM7-207ENST00000486828 ERCC6L2Q5T890 1561 aa25.65■■□□□ 1.7
PDLIM7-207ENST00000486828 DAPK1P53355 1430 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms