RNA–Protein interactions for RNA: ENST00000485682.6

TSSC4-209, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 2

Gene TSSC4, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-209ENST00000485682 EEA1Q15075 1411 aa29.28■■■□□ 2.28
TSSC4-209ENST00000485682 CSRNP3Q8WYN3 585 aa29.28■■■□□ 2.28
TSSC4-209ENST00000485682 JPH4Q96JJ6 628 aa29.28■■■□□ 2.28
TSSC4-209ENST00000485682 ARAP1Q96P48 1450 aa29.27■■■□□ 2.28
TSSC4-209ENST00000485682 PRXQ9BXM0 1461 aa29.26■■■□□ 2.27
TSSC4-209ENST00000485682 CYB5RLQ6IPT4 315 aa29.26■■■□□ 2.27
TSSC4-209ENST00000485682 PRG4Q92954 1404 aaPredicted RBP29.2■■■□□ 2.26
TSSC4-209ENST00000485682 ERCC6L2Q5T890 1561 aa29.19■■■□□ 2.26
TSSC4-209ENST00000485682 FAM9AQ8IZU1 332 aaPredicted RBP29.16■■■□□ 2.26
TSSC4-209ENST00000485682 IQGAP2Q13576 1575 aa29.1■■■□□ 2.25
TSSC4-209ENST00000485682 CTTNBP2Q8WZ74 1663 aa29■■■□□ 2.23
TSSC4-209ENST00000485682 CARMIL2Q6F5E8 1435 aa28.97■■■□□ 2.23
TSSC4-209ENST00000485682 UGGT2Q9NYU1 1516 aa28.97■■■□□ 2.23
TSSC4-209ENST00000485682 KIF21BO75037 1637 aa28.95■■■□□ 2.23
TSSC4-209ENST00000485682 DISP1Q96F81 1524 aa28.91■■■□□ 2.22
TSSC4-209ENST00000485682 TNIKQ9UKE5 1360 aa28.88■■■□□ 2.21
TSSC4-209ENST00000485682 PTPRGP23470 1445 aa28.86■■■□□ 2.21
TSSC4-209ENST00000485682 KIAA0556O60303 1618 aa28.83■■■□□ 2.21
TSSC4-209ENST00000485682 GOLGA3Q08378 1498 aa28.82■■■□□ 2.2
TSSC4-209ENST00000485682 TTBK1Q5TCY1 1321 aaPredicted RBP28.78■■■□□ 2.2
TSSC4-209ENST00000485682 UBTFP17480 764 aaKnown RBP28.74■■■□□ 2.19
TSSC4-209ENST00000485682 EHMT2Q96KQ7 1210 aa28.74■■■□□ 2.19
TSSC4-209ENST00000485682 ADCY10Q96PN6 1610 aa28.7■■■□□ 2.19
TSSC4-209ENST00000485682 NPM1P06748 294 aaKnown RBP eCLIP28.67■■■□□ 2.18
TSSC4-209ENST00000485682 UACAQ9BZF9 1416 aa28.67■■■□□ 2.18
TSSC4-209ENST00000485682 SAMD9Q5K651 1589 aa28.67■■■□□ 2.18
TSSC4-209ENST00000485682 UHRF1BP1LA0JNW5 1464 aa28.65■■■□□ 2.18
TSSC4-209ENST00000485682 P3H3Q8IVL6 736 aa28.64■■■□□ 2.18
TSSC4-209ENST00000485682 TRHP20396 242 aaPredicted RBP28.63■■■□□ 2.17
TSSC4-209ENST00000485682 RANGAP1P46060 587 aaPredicted RBP28.63■■■□□ 2.17
TSSC4-209ENST00000485682 ABCC2Q92887 1545 aa28.59■■■□□ 2.17
TSSC4-209ENST00000485682 EFCAB5A4FU69 1503 aa28.55■■■□□ 2.16
TSSC4-209ENST00000485682 PLB1Q6P1J6 1458 aa28.55■■■□□ 2.16
TSSC4-209ENST00000485682 MAPKBP1O60336 1514 aa28.54■■■□□ 2.16
TSSC4-209ENST00000485682 ABCA8O94911 1581 aa28.52■■■□□ 2.16
TSSC4-209ENST00000485682 KDM5BQ9UGL1 1544 aa28.5■■■□□ 2.15
TSSC4-209ENST00000485682 FHOD3Q2V2M9 1422 aa28.5■■■□□ 2.15
TSSC4-209ENST00000485682 ARHGAP35Q9NRY4 1499 aa28.43■■■□□ 2.14
TSSC4-209ENST00000485682 ABCC10Q5T3U5 1492 aa28.4■■■□□ 2.14
TSSC4-209ENST00000485682 ZCCHC11Q5TAX3 1644 aaKnown RBP28.4■■■□□ 2.14
TSSC4-209ENST00000485682 ASXL2Q76L83 1435 aa28.39■■■□□ 2.14
TSSC4-209ENST00000485682 RAPGEF6Q8TEU7 1601 aa28.36■■■□□ 2.13
TSSC4-209ENST00000485682 FAM69CQ0P6D2 419 aa28.36■■■□□ 2.13
TSSC4-209ENST00000485682 KIF13AQ9H1H9 1805 aa28.36■■■□□ 2.13
TSSC4-209ENST00000485682 DIP2BQ9P265 1576 aa28.33■■■□□ 2.13
TSSC4-209ENST00000485682 FMN1Q68DA7 1419 aa28.31■■■□□ 2.12
TSSC4-209ENST00000485682 ATP10BO94823 1461 aa28.31■■■□□ 2.12
TSSC4-209ENST00000485682 CLIP1P30622 1438 aa28.29■■■□□ 2.12
TSSC4-209ENST00000485682 NUP153P49790 1475 aaKnown RBP28.28■■■□□ 2.12
TSSC4-209ENST00000485682 LOC105371045A0A1W2PR82 267 aa28.28■■■□□ 2.12
TSSC4-209ENST00000485682 ARID3CA6NKF2 412 aa28.28■■■□□ 2.12
TSSC4-209ENST00000485682 WDR7Q9Y4E6 1490 aa28.25■■■□□ 2.11
TSSC4-209ENST00000485682 EPRSP07814 1512 aaKnown RBP28.23■■■□□ 2.11
TSSC4-209ENST00000485682 GLI2P10070 1586 aa28.22■■■□□ 2.11
TSSC4-209ENST00000485682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.2■■■□□ 2.1
TSSC4-209ENST00000485682 HNRNPUL2Q1KMD3 747 aaKnown RBP28.2■■■□□ 2.1
TSSC4-209ENST00000485682 CEP162Q5TB80 1403 aa28.17■■■□□ 2.1
TSSC4-209ENST00000485682 KCNH8Q96L42 1107 aa28.15■■■□□ 2.1
TSSC4-209ENST00000485682 ATP1B4Q9UN42 357 aaPredicted RBP28.14■■■□□ 2.1
TSSC4-209ENST00000485682 HECW1Q76N89 1606 aa28.13■■■□□ 2.09
TSSC4-209ENST00000485682 CASKIN1Q8WXD9 1431 aa28.1■■■□□ 2.09
TSSC4-209ENST00000485682 PLEKHD1A6NEE1 506 aa28.09■■■□□ 2.09
TSSC4-209ENST00000485682 TSPOAP1O95153 1857 aa28.07■■■□□ 2.08
TSSC4-209ENST00000485682 CDK13Q14004 1512 aaKnown RBP28.07■■■□□ 2.08
TSSC4-209ENST00000485682 MAP3K4Q9Y6R4 1608 aa28.07■■■□□ 2.08
TSSC4-209ENST00000485682 PCF11O94913 1555 aaKnown RBP28.03■■■□□ 2.08
TSSC4-209ENST00000485682 FYCO1Q9BQS8 1478 aa28.01■■■□□ 2.07
TSSC4-209ENST00000485682 CD109Q6YHK3 1445 aa28.01■■■□□ 2.07
TSSC4-209ENST00000485682 PPRC1Q5VV67 1664 aaKnown RBP28■■■□□ 2.07
TSSC4-209ENST00000485682 CDK11AQ9UQ88 783 aaPredicted RBP28■■■□□ 2.07
TSSC4-209ENST00000485682 CFAP43Q8NDM7 1665 aa28■■■□□ 2.07
TSSC4-209ENST00000485682 LRRIQ1Q96JM4 1722 aa27.97■■■□□ 2.07
TSSC4-209ENST00000485682 CCDC18Q5T9S5 1454 aa27.96■■■□□ 2.07
TSSC4-209ENST00000485682 ABCA9Q8IUA7 1624 aa27.96■■■□□ 2.07
TSSC4-209ENST00000485682 TEX14Q8IWB6 1497 aa27.95■■■□□ 2.06
TSSC4-209ENST00000485682 MAGI3Q5TCQ9 1506 aa27.94■■■□□ 2.06
TSSC4-209ENST00000485682 TROQ12816 1431 aaPredicted RBP27.88■■■□□ 2.05
TSSC4-209ENST00000485682 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.86■■■□□ 2.05
TSSC4-209ENST00000485682 KDM6BO15054 1643 aa27.85■■■□□ 2.05
TSSC4-209ENST00000485682 VPS8Q8N3P4 1428 aa27.84■■■□□ 2.05
TSSC4-209ENST00000485682 TTC37Q6PGP7 1564 aa27.8■■■□□ 2.04
TSSC4-209ENST00000485682 COL17A1Q9UMD9 1497 aaPredicted RBP27.78■■■□□ 2.04
TSSC4-209ENST00000485682 KIF14Q15058 1648 aa27.78■■■□□ 2.04
TSSC4-209ENST00000485682 PHLDB1Q86UU1 1377 aa27.77■■■□□ 2.04
TSSC4-209ENST00000485682 NEO1Q92859 1461 aa27.75■■■□□ 2.03
TSSC4-209ENST00000485682 PLCH2O75038 1416 aa27.73■■■□□ 2.03
TSSC4-209ENST00000485682 ARAP3Q8WWN8 1544 aa27.71■■■□□ 2.03
TSSC4-209ENST00000485682 MTUS2Q5JR59 1369 aa27.69■■■□□ 2.02
TSSC4-209ENST00000485682 FANCAO15360 1455 aa27.68■■■□□ 2.02
TSSC4-209ENST00000485682 MYO5CQ9NQX4 1742 aa27.66■■■□□ 2.02
TSSC4-209ENST00000485682 AKNAQ7Z591 1439 aa27.65■■■□□ 2.02
TSSC4-209ENST00000485682 EFCAB2Q5VUJ9 269 aa27.64■■■□□ 2.02
TSSC4-209ENST00000485682 TIAM1Q13009 1591 aa27.63■■■□□ 2.01
TSSC4-209ENST00000485682 CFAP74Q9C0B2 1584 aa27.63■■■□□ 2.01
TSSC4-209ENST00000485682 EHBP1L1Q8N3D4 1523 aa27.62■■■□□ 2.01
TSSC4-209ENST00000485682 MAP3K1Q13233 1512 aa27.6■■■□□ 2.01
TSSC4-209ENST00000485682 RAPGEF3O95398 923 aa27.57■■■□□ 2
TSSC4-209ENST00000485682 ARHGAP5Q13017 1502 aa27.57■■■□□ 2
TSSC4-209ENST00000485682 CDC42BPBQ9Y5S2 1711 aa27.55■■■□□ 2
TSSC4-209ENST00000485682 DENND4BO75064 1496 aaPredicted RBP27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 278.7 ms