RNA–Protein interactions for RNA: ENST00000485682.6

TSSC4-209, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 2

Gene TSSC4, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-209ENST00000485682 NISCHQ9Y2I1 1504 aa42.34■■■■■ 4.37
TSSC4-209ENST00000485682 CCDC180Q9P1Z9 1646 aa37.58■■■■□ 3.61
TSSC4-209ENST00000485682 ABCC9O60706 1549 aa36.7■■■■□ 3.47
TSSC4-209ENST00000485682 DCAF8L2P0C7V8 631 aa35.36■■■■□ 3.25
TSSC4-209ENST00000485682 RB1CC1Q8TDY2 1594 aa35.34■■■■□ 3.25
TSSC4-209ENST00000485682 NACADO15069 1562 aa35.34■■■■□ 3.25
TSSC4-209ENST00000485682 ZCCHC6Q5VYS8 1495 aaKnown RBP35.28■■■■□ 3.24
TSSC4-209ENST00000485682 MYO15BQ96JP2 1530 aa35.17■■■■□ 3.22
TSSC4-209ENST00000485682 DCAF1Q9Y4B6 1507 aa35.05■■■■□ 3.2
TSSC4-209ENST00000485682 UNC13AQ9UPW8 1703 aa34.51■■■■□ 3.12
TSSC4-209ENST00000485682 PABPN1Q86U42 306 aaKnown RBP eCLIP34.34■■■■□ 3.09
TSSC4-209ENST00000485682 BICRAQ9NZM4 1560 aa34.28■■■■□ 3.08
TSSC4-209ENST00000485682 SCRIBQ14160 1630 aa34.26■■■■□ 3.08
TSSC4-209ENST00000485682 SHROOM4Q9ULL8 1493 aa33.95■■■■□ 3.02
TSSC4-209ENST00000485682 DNAJC5BQ9UF47 199 aa33.67■■■□□ 2.98
TSSC4-209ENST00000485682 EIF4G1Q04637 1599 aaKnown RBP33.36■■■□□ 2.93
TSSC4-209ENST00000485682 CC2D2AQ9P2K1 1620 aa33.2■■■□□ 2.91
TSSC4-209ENST00000485682 CECR2Q9BXF3 1484 aa32.99■■■□□ 2.87
TSSC4-209ENST00000485682 SMARCA4P51532 1647 aa32.81■■■□□ 2.84
TSSC4-209ENST00000485682 BAZ1AQ9NRL2 1556 aaPredicted RBP32.8■■■□□ 2.84
TSSC4-209ENST00000485682 ATAD2BQ9ULI0 1458 aa32.65■■■□□ 2.82
TSSC4-209ENST00000485682 NCAPD3P42695 1498 aa32.63■■■□□ 2.81
TSSC4-209ENST00000485682 MROH2BQ7Z745 1585 aa32.62■■■□□ 2.81
TSSC4-209ENST00000485682 SMARCA2P51531 1590 aa32.6■■■□□ 2.81
TSSC4-209ENST00000485682 PEG3Q9GZU2 1588 aa32.51■■■□□ 2.79
TSSC4-209ENST00000485682 HMGXB3Q12766 1538 aa32.44■■■□□ 2.78
TSSC4-209ENST00000485682 BAZ1BQ9UIG0 1483 aaKnown RBP32.36■■■□□ 2.77
TSSC4-209ENST00000485682 RSF1Q96T23 1441 aaPredicted RBP32.3■■■□□ 2.76
TSSC4-209ENST00000485682 WIZO95785 1651 aa32.25■■■□□ 2.75
TSSC4-209ENST00000485682 TOP2AP11388 1531 aaKnown RBP31.93■■■□□ 2.7
TSSC4-209ENST00000485682 NESP48681 1621 aa31.78■■■□□ 2.68
TSSC4-209ENST00000485682 LAMC3Q9Y6N6 1575 aa31.73■■■□□ 2.67
TSSC4-209ENST00000485682 CADPSQ9ULU8 1353 aa31.68■■■□□ 2.66
TSSC4-209ENST00000485682 ERCC6Q03468 1493 aa31.62■■■□□ 2.65
TSSC4-209ENST00000485682 CCDC88BA6NC98 1476 aa31.58■■■□□ 2.65
TSSC4-209ENST00000485682 SUPT5HO00267 1087 aaKnown RBP31.54■■■□□ 2.64
TSSC4-209ENST00000485682 PDS5BQ9NTI5 1447 aa31.53■■■□□ 2.64
TSSC4-209ENST00000485682 CFTRP13569 1480 aa31.51■■■□□ 2.63
TSSC4-209ENST00000485682 KIF21AQ7Z4S6 1674 aa31.38■■■□□ 2.61
TSSC4-209ENST00000485682 FANCD2Q9BXW9 1451 aa31.29■■■□□ 2.6
TSSC4-209ENST00000485682 CUX2O14529 1486 aa31.27■■■□□ 2.6
TSSC4-209ENST00000485682 THOC2Q8NI27 1593 aaKnown RBP31.26■■■□□ 2.6
TSSC4-209ENST00000485682 CEP164Q9UPV0 1460 aa31.24■■■□□ 2.59
TSSC4-209ENST00000485682 PRDM2Q13029 1718 aa31.21■■■□□ 2.59
TSSC4-209ENST00000485682 MRC2Q9UBG0 1479 aa31.19■■■□□ 2.58
TSSC4-209ENST00000485682 WDR62O43379 1518 aa31.08■■■□□ 2.57
TSSC4-209ENST00000485682 URB2Q14146 1524 aaKnown RBP30.98■■■□□ 2.55
TSSC4-209ENST00000485682 ABCC8Q09428 1581 aa30.83■■■□□ 2.53
TSSC4-209ENST00000485682 TOPBP1Q92547 1522 aa30.8■■■□□ 2.52
TSSC4-209ENST00000485682 DNMBPQ6XZF7 1577 aa30.76■■■□□ 2.52
TSSC4-209ENST00000485682 IFT140Q96RY7 1462 aa30.6■■■□□ 2.49
TSSC4-209ENST00000485682 CUX1P39880 1505 aa30.59■■■□□ 2.49
TSSC4-209ENST00000485682 POLA1P09884 1462 aaPredicted RBP30.55■■■□□ 2.48
TSSC4-209ENST00000485682 FGD5Q6ZNL6 1462 aa30.48■■■□□ 2.47
TSSC4-209ENST00000485682 TARBP1Q13395 1621 aaKnown RBP30.45■■■□□ 2.47
TSSC4-209ENST00000485682 ZNF608Q9ULD9 1512 aaPredicted RBP30.44■■■□□ 2.46
TSSC4-209ENST00000485682 SOGA1O94964 1423 aa30.44■■■□□ 2.46
TSSC4-209ENST00000485682 WRNQ14191 1432 aaPredicted RBP eCLIP30.44■■■□□ 2.46
TSSC4-209ENST00000485682 RAD54L2Q9Y4B4 1467 aa30.42■■■□□ 2.46
TSSC4-209ENST00000485682 TOP2BQ02880 1626 aa30.35■■■□□ 2.45
TSSC4-209ENST00000485682 BIVM-ERCC5R4GMW8 1640 aa30.33■■■□□ 2.45
TSSC4-209ENST00000485682 SYNJ1O43426 1573 aa30.33■■■□□ 2.45
TSSC4-209ENST00000485682 AQRO60306 1485 aaKnown RBP eCLIP30.3■■■□□ 2.44
TSSC4-209ENST00000485682 EIF4G3O43432 1585 aaKnown RBP30.29■■■□□ 2.44
TSSC4-209ENST00000485682 DNAJC5Q9H3Z4 198 aa30.28■■■□□ 2.44
TSSC4-209ENST00000485682 TDRD9Q8NDG6 1382 aaKnown RBP30.26■■■□□ 2.43
TSSC4-209ENST00000485682 WDR97A6NE52 1622 aa30.22■■■□□ 2.43
TSSC4-209ENST00000485682 ABCA10Q8WWZ4 1543 aa30.2■■■□□ 2.42
TSSC4-209ENST00000485682 GAPVD1Q14C86 1478 aa30.08■■■□□ 2.41
TSSC4-209ENST00000485682 GRIN2BQ13224 1484 aa30.07■■■□□ 2.4
TSSC4-209ENST00000485682 OSCARQ8IYS5 282 aa30.05■■■□□ 2.4
TSSC4-209ENST00000485682 ABCA5Q8WWZ7 1642 aa30.04■■■□□ 2.4
TSSC4-209ENST00000485682 SNAPC4Q5SXM2 1469 aa29.99■■■□□ 2.39
TSSC4-209ENST00000485682 MAGI1Q96QZ7 1491 aaPredicted RBP29.98■■■□□ 2.39
TSSC4-209ENST00000485682 PBRM1Q86U86 1689 aa29.95■■■□□ 2.39
TSSC4-209ENST00000485682 FBLN2P98095 1184 aa29.92■■■□□ 2.38
TSSC4-209ENST00000485682 CHD1O14646 1710 aa29.89■■■□□ 2.38
TSSC4-209ENST00000485682 CHMP7Q8WUX9 453 aaPredicted RBP29.87■■■□□ 2.37
TSSC4-209ENST00000485682 SYNJ2O15056 1496 aa29.86■■■□□ 2.37
TSSC4-209ENST00000485682 ERICH3Q5RHP9 1530 aa29.84■■■□□ 2.37
TSSC4-209ENST00000485682 KIF27Q86VH2 1401 aa29.81■■■□□ 2.36
TSSC4-209ENST00000485682 TRIM41Q8WV44 630 aa29.8■■■□□ 2.36
TSSC4-209ENST00000485682 ADAMTS12P58397 1594 aa29.75■■■□□ 2.35
TSSC4-209ENST00000485682 FHAD1B1AJZ9 1412 aa29.74■■■□□ 2.35
TSSC4-209ENST00000485682 IGF1RP08069 1367 aa29.7■■■□□ 2.35
TSSC4-209ENST00000485682 GRIN2AQ12879 1464 aa29.68■■■□□ 2.34
TSSC4-209ENST00000485682 CLASP1Q7Z460 1538 aa29.6■■■□□ 2.33
TSSC4-209ENST00000485682 CUL7Q14999 1698 aa29.56■■■□□ 2.32
TSSC4-209ENST00000485682 RUSC2Q8N2Y8 1516 aa29.55■■■□□ 2.32
TSSC4-209ENST00000485682 NUP160Q12769 1436 aa29.55■■■□□ 2.32
TSSC4-209ENST00000485682 CARMIL1Q5VZK9 1371 aa29.52■■■□□ 2.32
TSSC4-209ENST00000485682 CHIC1Q5VXU3 224 aa29.51■■■□□ 2.31
TSSC4-209ENST00000485682 ARHGEF11O15085 1522 aa29.5■■■□□ 2.31
TSSC4-209ENST00000485682 CEP170Q5SW79 1584 aa29.5■■■□□ 2.31
TSSC4-209ENST00000485682 RIMBP3CA6NJZ7 1639 aa29.49■■■□□ 2.31
TSSC4-209ENST00000485682 RIMBP3BA6NNM3 1639 aa29.49■■■□□ 2.31
TSSC4-209ENST00000485682 RIMBP3Q9UFD9 1639 aa29.49■■■□□ 2.31
TSSC4-209ENST00000485682 RAPGEF2Q9Y4G8 1499 aa29.33■■■□□ 2.29
TSSC4-209ENST00000485682 SHROOM2Q13796 1616 aa29.3■■■□□ 2.28
TSSC4-209ENST00000485682 KIAA0586Q9BVV6 1533 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms