RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 FHAD1B1AJZ9 1412 aa23.6■■□□□ 1.37
UBA3-210ENST00000485424 KIF13AQ9H1H9 1805 aa23.57■■□□□ 1.36
UBA3-210ENST00000485424 RUSC2Q8N2Y8 1516 aa23.53■■□□□ 1.36
UBA3-210ENST00000485424 CUL7Q14999 1698 aa23.41■■□□□ 1.34
UBA3-210ENST00000485424 PRG4Q92954 1404 aaPredicted RBP23.39■■□□□ 1.33
UBA3-210ENST00000485424 ADCY10Q96PN6 1610 aa23.32■■□□□ 1.32
UBA3-210ENST00000485424 JPH4Q96JJ6 628 aa23.27■■□□□ 1.32
UBA3-210ENST00000485424 MAPKBP1O60336 1514 aa23.24■■□□□ 1.31
UBA3-210ENST00000485424 DIP2BQ9P265 1576 aa23.24■■□□□ 1.31
UBA3-210ENST00000485424 KIF27Q86VH2 1401 aa23.23■■□□□ 1.31
UBA3-210ENST00000485424 TSPOAP1O95153 1857 aa23.22■■□□□ 1.31
UBA3-210ENST00000485424 POTEDQ86YR6 584 aa23.22■■□□□ 1.31
UBA3-210ENST00000485424 KIAA0586Q9BVV6 1533 aa23.22■■□□□ 1.31
UBA3-210ENST00000485424 IGF1RP08069 1367 aa23.18■■□□□ 1.3
UBA3-210ENST00000485424 ABCC10Q5T3U5 1492 aa23.17■■□□□ 1.3
UBA3-210ENST00000485424 IQGAP2Q13576 1575 aa23.1■■□□□ 1.29
UBA3-210ENST00000485424 KDM6BO15054 1643 aa23.05■■□□□ 1.28
UBA3-210ENST00000485424 CARMIL1Q5VZK9 1371 aa23.04■■□□□ 1.28
UBA3-210ENST00000485424 NPM1P06748 294 aaKnown RBP eCLIP23.03■■□□□ 1.28
UBA3-210ENST00000485424 FAM69CQ0P6D2 419 aa23.03■■□□□ 1.28
UBA3-210ENST00000485424 PPRC1Q5VV67 1664 aaKnown RBP23.01■■□□□ 1.27
UBA3-210ENST00000485424 CTTNBP2Q8WZ74 1663 aa23.01■■□□□ 1.27
UBA3-210ENST00000485424 PTPRGP23470 1445 aa22.96■■□□□ 1.27
UBA3-210ENST00000485424 CARMIL2Q6F5E8 1435 aa22.96■■□□□ 1.27
UBA3-210ENST00000485424 ABCC2Q92887 1545 aa22.96■■□□□ 1.27
UBA3-210ENST00000485424 DISP1Q96F81 1524 aa22.93■■□□□ 1.26
UBA3-210ENST00000485424 TNIKQ9UKE5 1360 aa22.93■■□□□ 1.26
UBA3-210ENST00000485424 KIAA0556O60303 1618 aa22.91■■□□□ 1.26
UBA3-210ENST00000485424 ZCCHC11Q5TAX3 1644 aaKnown RBP22.9■■□□□ 1.26
UBA3-210ENST00000485424 GLI2P10070 1586 aa22.9■■□□□ 1.26
UBA3-210ENST00000485424 MSH5O43196 834 aa22.9■■□□□ 1.26
UBA3-210ENST00000485424 UGGT2Q9NYU1 1516 aa22.9■■□□□ 1.26
UBA3-210ENST00000485424 UHRF1BP1LA0JNW5 1464 aa22.89■■□□□ 1.25
UBA3-210ENST00000485424 RAPGEF2Q9Y4G8 1499 aa22.88■■□□□ 1.25
UBA3-210ENST00000485424 MAP3K4Q9Y6R4 1608 aa22.86■■□□□ 1.25
UBA3-210ENST00000485424 TTBK1Q5TCY1 1321 aaPredicted RBP22.86■■□□□ 1.25
UBA3-210ENST00000485424 ASXL2Q76L83 1435 aa22.85■■□□□ 1.25
UBA3-210ENST00000485424 PLB1Q6P1J6 1458 aa22.84■■□□□ 1.25
UBA3-210ENST00000485424 UACAQ9BZF9 1416 aa22.82■■□□□ 1.24
UBA3-210ENST00000485424 KDM5BQ9UGL1 1544 aa22.81■■□□□ 1.24
UBA3-210ENST00000485424 EPRSP07814 1512 aaKnown RBP22.75■■□□□ 1.23
UBA3-210ENST00000485424 CFAP43Q8NDM7 1665 aa22.7■■□□□ 1.22
UBA3-210ENST00000485424 ABCA8O94911 1581 aa22.67■■□□□ 1.22
UBA3-210ENST00000485424 KDM4FA0A1W2PPD8 638 aa22.66■■□□□ 1.22
UBA3-210ENST00000485424 GOLGA3Q08378 1498 aa22.65■■□□□ 1.22
UBA3-210ENST00000485424 TEX14Q8IWB6 1497 aa22.65■■□□□ 1.22
UBA3-210ENST00000485424 WDR7Q9Y4E6 1490 aa22.65■■□□□ 1.22
UBA3-210ENST00000485424 PRXQ9BXM0 1461 aa22.62■■□□□ 1.21
UBA3-210ENST00000485424 COL17A1Q9UMD9 1497 aaPredicted RBP22.62■■□□□ 1.21
UBA3-210ENST00000485424 ADGRL1O94910 1474 aa22.59■■□□□ 1.21
UBA3-210ENST00000485424 SAMD9Q5K651 1589 aa22.53■■□□□ 1.2
UBA3-210ENST00000485424 MAGI3Q5TCQ9 1506 aa22.51■■□□□ 1.19
UBA3-210ENST00000485424 PIAS4Q8N2W9 510 aaPredicted RBP22.48■■□□□ 1.19
UBA3-210ENST00000485424 KIF21BO75037 1637 aa22.47■■□□□ 1.19
UBA3-210ENST00000485424 RAPGEF6Q8TEU7 1601 aa22.46■■□□□ 1.19
UBA3-210ENST00000485424 CD109Q6YHK3 1445 aa22.45■■□□□ 1.18
UBA3-210ENST00000485424 ABCA9Q8IUA7 1624 aa22.45■■□□□ 1.18
UBA3-210ENST00000485424 HECW2Q9P2P5 1572 aa22.38■■□□□ 1.17
UBA3-210ENST00000485424 ATP10BO94823 1461 aa22.38■■□□□ 1.17
UBA3-210ENST00000485424 KCNH8Q96L42 1107 aa22.37■■□□□ 1.17
UBA3-210ENST00000485424 ARAP3Q8WWN8 1544 aa22.34■■□□□ 1.17
UBA3-210ENST00000485424 PLPPR3Q6T4P5 718 aa22.33■■□□□ 1.17
UBA3-210ENST00000485424 FAM9AQ8IZU1 332 aaPredicted RBP22.32■■□□□ 1.16
UBA3-210ENST00000485424 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
UBA3-210ENST00000485424 ARID3CA6NKF2 412 aa22.3■■□□□ 1.16
UBA3-210ENST00000485424 FRMPD1Q5SYB0 1578 aa22.29■■□□□ 1.16
UBA3-210ENST00000485424 CSRNP3Q8WYN3 585 aa22.28■■□□□ 1.16
UBA3-210ENST00000485424 EEA1Q15075 1411 aa22.28■■□□□ 1.16
UBA3-210ENST00000485424 NUP153P49790 1475 aaKnown RBP22.27■■□□□ 1.16
UBA3-210ENST00000485424 ADAMTSL3P82987 1691 aa22.25■■□□□ 1.15
UBA3-210ENST00000485424 RICTORQ6R327 1708 aa22.25■■□□□ 1.15
UBA3-210ENST00000485424 FHOD3Q2V2M9 1422 aa22.23■■□□□ 1.15
UBA3-210ENST00000485424 BCORL1Q5H9F3 1711 aa22.22■■□□□ 1.15
UBA3-210ENST00000485424 NEO1Q92859 1461 aa22.22■■□□□ 1.15
UBA3-210ENST00000485424 EFCAB5A4FU69 1503 aa22.21■■□□□ 1.15
UBA3-210ENST00000485424 CFAP74Q9C0B2 1584 aa22.21■■□□□ 1.15
UBA3-210ENST00000485424 PPP6R1Q9UPN7 881 aa22.19■■□□□ 1.14
UBA3-210ENST00000485424 PHLDB1Q86UU1 1377 aa22.18■■□□□ 1.14
UBA3-210ENST00000485424 TTC37Q6PGP7 1564 aa22.17■■□□□ 1.14
UBA3-210ENST00000485424 ARHGEF40Q8TER5 1519 aa22.16■■□□□ 1.14
UBA3-210ENST00000485424 MADDQ8WXG6 1647 aa22.15■■□□□ 1.14
UBA3-210ENST00000485424 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.13■■□□□ 1.13
UBA3-210ENST00000485424 RANGAP1P46060 587 aaPredicted RBP22.11■■□□□ 1.13
UBA3-210ENST00000485424 SIGLEC1Q9BZZ2 1709 aa22.11■■□□□ 1.13
UBA3-210ENST00000485424 RIMS1Q86UR5 1692 aaKnown RBP22.11■■□□□ 1.13
UBA3-210ENST00000485424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.1■■□□□ 1.13
UBA3-210ENST00000485424 HNRNPUL2Q1KMD3 747 aaKnown RBP22.1■■□□□ 1.13
UBA3-210ENST00000485424 MYO5CQ9NQX4 1742 aa22.1■■□□□ 1.13
UBA3-210ENST00000485424 LRRIQ1Q96JM4 1722 aa22.09■■□□□ 1.13
UBA3-210ENST00000485424 CDK13Q14004 1512 aaKnown RBP22.08■■□□□ 1.13
UBA3-210ENST00000485424 RAPGEF3O95398 923 aa22.08■■□□□ 1.13
UBA3-210ENST00000485424 ILDR1Q86SU0 546 aaPredicted RBP22.08■■□□□ 1.13
UBA3-210ENST00000485424 PTPRMP28827 1452 aa22.08■■□□□ 1.12
UBA3-210ENST00000485424 ADRA2BP18089 450 aa22.07■■□□□ 1.12
UBA3-210ENST00000485424 ZMYM4Q5VZL5 1548 aa22.06■■□□□ 1.12
UBA3-210ENST00000485424 FANCAO15360 1455 aa22.05■■□□□ 1.12
UBA3-210ENST00000485424 HECW1Q76N89 1606 aa22.05■■□□□ 1.12
UBA3-210ENST00000485424 FER1L4A9Z1Z3 1794 aa22.03■■□□□ 1.12
UBA3-210ENST00000485424 DENND4BO75064 1496 aaPredicted RBP22.03■■□□□ 1.12
UBA3-210ENST00000485424 AKNAQ7Z591 1439 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms