RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 KIAA0586Q9BVV6 1533 aa29.86■■■□□ 2.37
SREBF1-213ENST00000485080 PRXQ9BXM0 1461 aa29.84■■■□□ 2.37
SREBF1-213ENST00000485080 ARAP1Q96P48 1450 aa29.82■■■□□ 2.36
SREBF1-213ENST00000485080 JPH4Q96JJ6 628 aa29.81■■■□□ 2.36
SREBF1-213ENST00000485080 CSRNP3Q8WYN3 585 aa29.79■■■□□ 2.36
SREBF1-213ENST00000485080 CYB5RLQ6IPT4 315 aa29.75■■■□□ 2.35
SREBF1-213ENST00000485080 PRG4Q92954 1404 aaPredicted RBP29.71■■■□□ 2.35
SREBF1-213ENST00000485080 ERCC6L2Q5T890 1561 aa29.7■■■□□ 2.35
SREBF1-213ENST00000485080 IQGAP2Q13576 1575 aa29.65■■■□□ 2.34
SREBF1-213ENST00000485080 UGGT2Q9NYU1 1516 aa29.55■■■□□ 2.32
SREBF1-213ENST00000485080 FAM9AQ8IZU1 332 aaPredicted RBP29.54■■■□□ 2.32
SREBF1-213ENST00000485080 CTTNBP2Q8WZ74 1663 aa29.53■■■□□ 2.32
SREBF1-213ENST00000485080 CARMIL2Q6F5E8 1435 aa29.52■■■□□ 2.32
SREBF1-213ENST00000485080 KIF21BO75037 1637 aa29.51■■■□□ 2.31
SREBF1-213ENST00000485080 DISP1Q96F81 1524 aa29.47■■■□□ 2.31
SREBF1-213ENST00000485080 TNIKQ9UKE5 1360 aa29.43■■■□□ 2.3
SREBF1-213ENST00000485080 PTPRGP23470 1445 aa29.39■■■□□ 2.3
SREBF1-213ENST00000485080 GOLGA3Q08378 1498 aa29.38■■■□□ 2.29
SREBF1-213ENST00000485080 AEBP2Q6ZN18 517 aaPredicted RBP29.37■■■□□ 2.29
SREBF1-213ENST00000485080 KIAA0556O60303 1618 aa29.36■■■□□ 2.29
SREBF1-213ENST00000485080 ADCY10Q96PN6 1610 aa29.24■■■□□ 2.27
SREBF1-213ENST00000485080 UHRF1BP1LA0JNW5 1464 aa29.23■■■□□ 2.27
SREBF1-213ENST00000485080 SAMD9Q5K651 1589 aa29.22■■■□□ 2.27
SREBF1-213ENST00000485080 UACAQ9BZF9 1416 aa29.2■■■□□ 2.27
SREBF1-213ENST00000485080 UBTFP17480 764 aaKnown RBP29.19■■■□□ 2.26
SREBF1-213ENST00000485080 NPM1P06748 294 aaKnown RBP eCLIP29.16■■■□□ 2.26
SREBF1-213ENST00000485080 ABCC2Q92887 1545 aa29.15■■■□□ 2.26
SREBF1-213ENST00000485080 TTBK1Q5TCY1 1321 aaPredicted RBP29.14■■■□□ 2.25
SREBF1-213ENST00000485080 EFCAB5A4FU69 1503 aa29.13■■■□□ 2.25
SREBF1-213ENST00000485080 MAPKBP1O60336 1514 aa29.11■■■□□ 2.25
SREBF1-213ENST00000485080 ABCA8O94911 1581 aa29.08■■■□□ 2.25
SREBF1-213ENST00000485080 KDM5BQ9UGL1 1544 aa29.06■■■□□ 2.24
SREBF1-213ENST00000485080 PLB1Q6P1J6 1458 aa29.06■■■□□ 2.24
SREBF1-213ENST00000485080 TRHP20396 242 aaPredicted RBP29.06■■■□□ 2.24
SREBF1-213ENST00000485080 P3H3Q8IVL6 736 aa29.06■■■□□ 2.24
SREBF1-213ENST00000485080 EHMT2Q96KQ7 1210 aa29.06■■■□□ 2.24
SREBF1-213ENST00000485080 RANGAP1P46060 587 aaPredicted RBP28.99■■■□□ 2.23
SREBF1-213ENST00000485080 FHOD3Q2V2M9 1422 aa28.99■■■□□ 2.23
SREBF1-213ENST00000485080 ABCC10Q5T3U5 1492 aa28.96■■■□□ 2.23
SREBF1-213ENST00000485080 ARHGAP35Q9NRY4 1499 aa28.96■■■□□ 2.23
SREBF1-213ENST00000485080 ASXL2Q76L83 1435 aa28.92■■■□□ 2.22
SREBF1-213ENST00000485080 ZCCHC11Q5TAX3 1644 aaKnown RBP28.91■■■□□ 2.22
SREBF1-213ENST00000485080 RAPGEF6Q8TEU7 1601 aa28.89■■■□□ 2.22
SREBF1-213ENST00000485080 KIF13AQ9H1H9 1805 aa28.87■■■□□ 2.21
SREBF1-213ENST00000485080 DIP2BQ9P265 1576 aa28.87■■■□□ 2.21
SREBF1-213ENST00000485080 FMN1Q68DA7 1419 aa28.86■■■□□ 2.21
SREBF1-213ENST00000485080 FAM69CQ0P6D2 419 aa28.84■■■□□ 2.21
SREBF1-213ENST00000485080 ATP10BO94823 1461 aa28.84■■■□□ 2.21
SREBF1-213ENST00000485080 NUP153P49790 1475 aaKnown RBP28.82■■■□□ 2.2
SREBF1-213ENST00000485080 GLI2P10070 1586 aa28.79■■■□□ 2.2
SREBF1-213ENST00000485080 CLIP1P30622 1438 aa28.79■■■□□ 2.2
SREBF1-213ENST00000485080 WDR7Q9Y4E6 1490 aa28.78■■■□□ 2.2
SREBF1-213ENST00000485080 EPRSP07814 1512 aaKnown RBP28.76■■■□□ 2.19
SREBF1-213ENST00000485080 LOC105371045A0A1W2PR82 267 aa28.7■■■□□ 2.18
SREBF1-213ENST00000485080 ARID3CA6NKF2 412 aa28.67■■■□□ 2.18
SREBF1-213ENST00000485080 CEP162Q5TB80 1403 aa28.67■■■□□ 2.18
SREBF1-213ENST00000485080 HECW1Q76N89 1606 aa28.65■■■□□ 2.18
SREBF1-213ENST00000485080 CASKIN1Q8WXD9 1431 aa28.64■■■□□ 2.18
SREBF1-213ENST00000485080 MAP3K4Q9Y6R4 1608 aa28.61■■■□□ 2.17
SREBF1-213ENST00000485080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.6■■■□□ 2.17
SREBF1-213ENST00000485080 HNRNPUL2Q1KMD3 747 aaKnown RBP28.6■■■□□ 2.17
SREBF1-213ENST00000485080 PLEKHD1A6NEE1 506 aa28.58■■■□□ 2.17
SREBF1-213ENST00000485080 KCNH8Q96L42 1107 aa28.58■■■□□ 2.17
SREBF1-213ENST00000485080 FYCO1Q9BQS8 1478 aa28.56■■■□□ 2.16
SREBF1-213ENST00000485080 CDK13Q14004 1512 aaKnown RBP28.55■■■□□ 2.16
SREBF1-213ENST00000485080 PPRC1Q5VV67 1664 aaKnown RBP28.54■■■□□ 2.16
SREBF1-213ENST00000485080 CFAP43Q8NDM7 1665 aa28.54■■■□□ 2.16
SREBF1-213ENST00000485080 PCF11O94913 1555 aaKnown RBP28.54■■■□□ 2.16
SREBF1-213ENST00000485080 TSPOAP1O95153 1857 aa28.53■■■□□ 2.16
SREBF1-213ENST00000485080 ATP1B4Q9UN42 357 aaPredicted RBP28.52■■■□□ 2.16
SREBF1-213ENST00000485080 CD109Q6YHK3 1445 aa28.52■■■□□ 2.16
SREBF1-213ENST00000485080 CDK11AQ9UQ88 783 aaPredicted RBP28.51■■■□□ 2.15
SREBF1-213ENST00000485080 MAGI3Q5TCQ9 1506 aa28.51■■■□□ 2.15
SREBF1-213ENST00000485080 CCDC18Q5T9S5 1454 aa28.51■■■□□ 2.15
SREBF1-213ENST00000485080 ABCA9Q8IUA7 1624 aa28.51■■■□□ 2.15
SREBF1-213ENST00000485080 TEX14Q8IWB6 1497 aa28.5■■■□□ 2.15
SREBF1-213ENST00000485080 LRRIQ1Q96JM4 1722 aa28.47■■■□□ 2.15
SREBF1-213ENST00000485080 TROQ12816 1431 aaPredicted RBP28.42■■■□□ 2.14
SREBF1-213ENST00000485080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.37■■■□□ 2.13
SREBF1-213ENST00000485080 KDM6BO15054 1643 aa28.36■■■□□ 2.13
SREBF1-213ENST00000485080 PHLDB1Q86UU1 1377 aa28.36■■■□□ 2.13
SREBF1-213ENST00000485080 VPS8Q8N3P4 1428 aa28.35■■■□□ 2.13
SREBF1-213ENST00000485080 TTC37Q6PGP7 1564 aa28.3■■■□□ 2.12
SREBF1-213ENST00000485080 NEO1Q92859 1461 aa28.3■■■□□ 2.12
SREBF1-213ENST00000485080 KIF14Q15058 1648 aa28.29■■■□□ 2.12
SREBF1-213ENST00000485080 COL17A1Q9UMD9 1497 aaPredicted RBP28.29■■■□□ 2.12
SREBF1-213ENST00000485080 ARAP3Q8WWN8 1544 aa28.27■■■□□ 2.12
SREBF1-213ENST00000485080 PLCH2O75038 1416 aa28.26■■■□□ 2.11
SREBF1-213ENST00000485080 FANCAO15360 1455 aa28.2■■■□□ 2.1
SREBF1-213ENST00000485080 CFAP74Q9C0B2 1584 aa28.19■■■□□ 2.1
SREBF1-213ENST00000485080 MAP3K1Q13233 1512 aa28.18■■■□□ 2.1
SREBF1-213ENST00000485080 MTUS2Q5JR59 1369 aa28.17■■■□□ 2.1
SREBF1-213ENST00000485080 MYO5CQ9NQX4 1742 aa28.17■■■□□ 2.1
SREBF1-213ENST00000485080 AKNAQ7Z591 1439 aa28.16■■■□□ 2.1
SREBF1-213ENST00000485080 TIAM1Q13009 1591 aa28.14■■■□□ 2.1
SREBF1-213ENST00000485080 EHBP1L1Q8N3D4 1523 aa28.13■■■□□ 2.09
SREBF1-213ENST00000485080 EFCAB2Q5VUJ9 269 aa28.13■■■□□ 2.09
SREBF1-213ENST00000485080 PREX2Q70Z35 1606 aa28.07■■■□□ 2.08
SREBF1-213ENST00000485080 DENND4BO75064 1496 aaPredicted RBP28.06■■■□□ 2.08
SREBF1-213ENST00000485080 GPATCH8Q9UKJ3 1502 aaKnown RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms