RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 KIF27Q86VH2 1401 aa13.76□□□□□ -0.21
USP16-206ENST00000485067 FGD5Q6ZNL6 1462 aa13.75□□□□□ -0.21
USP16-206ENST00000485067 CCER1Q8TC90 406 aaPredicted RBP13.75□□□□□ -0.21
USP16-206ENST00000485067 CUX2O14529 1486 aa13.73□□□□□ -0.21
USP16-206ENST00000485067 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.71□□□□□ -0.21
USP16-206ENST00000485067 TAOK2Q9UL54 1235 aa13.71□□□□□ -0.21
USP16-206ENST00000485067 RAD54L2Q9Y4B4 1467 aa13.69□□□□□ -0.22
USP16-206ENST00000485067 IGF1RP08069 1367 aa13.68□□□□□ -0.22
USP16-206ENST00000485067 TOPBP1Q92547 1522 aa13.65□□□□□ -0.22
USP16-206ENST00000485067 ARAP1Q96P48 1450 aa13.65□□□□□ -0.22
USP16-206ENST00000485067 DNMBPQ6XZF7 1577 aa13.63□□□□□ -0.23
USP16-206ENST00000485067 POLA1P09884 1462 aaPredicted RBP13.63□□□□□ -0.23
USP16-206ENST00000485067 URB2Q14146 1524 aaKnown RBP13.63□□□□□ -0.23
USP16-206ENST00000485067 LAMC3Q9Y6N6 1575 aa13.6□□□□□ -0.23
USP16-206ENST00000485067 CARMIL1Q5VZK9 1371 aa13.59□□□□□ -0.23
USP16-206ENST00000485067 KIF21AQ7Z4S6 1674 aa13.59□□□□□ -0.23
USP16-206ENST00000485067 ARHGAP35Q9NRY4 1499 aa13.57□□□□□ -0.24
USP16-206ENST00000485067 NPM3O75607 178 aaKnown RBP13.57□□□□□ -0.24
USP16-206ENST00000485067 ANP32EQ9BTT0 268 aa13.56□□□□□ -0.24
USP16-206ENST00000485067 KANK4Q5T7N3 995 aaPredicted RBP13.56□□□□□ -0.24
USP16-206ENST00000485067 HOMEZQ8IX15 550 aa13.56□□□□□ -0.24
USP16-206ENST00000485067 ABCA10Q8WWZ4 1543 aa13.55□□□□□ -0.24
USP16-206ENST00000485067 HNRNPUL2Q1KMD3 747 aaKnown RBP13.53□□□□□ -0.24
USP16-206ENST00000485067 TDRD9Q8NDG6 1382 aaKnown RBP13.53□□□□□ -0.24
USP16-206ENST00000485067 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.24
USP16-206ENST00000485067 TULP1O00294 542 aaPredicted RBP13.52□□□□□ -0.25
USP16-206ENST00000485067 PKNOX2Q96KN3 472 aa13.52□□□□□ -0.25
USP16-206ENST00000485067 PLCB2Q00722 1185 aa13.51□□□□□ -0.25
USP16-206ENST00000485067 PDS5BQ9NTI5 1447 aa13.51□□□□□ -0.25
USP16-206ENST00000485067 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
USP16-206ENST00000485067 P3H3Q8IVL6 736 aa13.51□□□□□ -0.25
USP16-206ENST00000485067 WDR97A6NE52 1622 aa13.5□□□□□ -0.25
USP16-206ENST00000485067 MAP3K1Q13233 1512 aa13.49□□□□□ -0.25
USP16-206ENST00000485067 CUL7Q14999 1698 aa13.47□□□□□ -0.25
USP16-206ENST00000485067 RRBP1Q9P2E9 1410 aaKnown RBP13.46□□□□□ -0.25
USP16-206ENST00000485067 BCANQ96GW7 911 aa13.46□□□□□ -0.25
USP16-206ENST00000485067 ANO8Q9HCE9 1232 aaPredicted RBP13.45□□□□□ -0.26
USP16-206ENST00000485067 PDIA4P13667 645 aaKnown RBP13.44□□□□□ -0.26
USP16-206ENST00000485067 CLSPNQ9HAW4 1339 aa13.44□□□□□ -0.26
USP16-206ENST00000485067 ABCA5Q8WWZ7 1642 aa13.44□□□□□ -0.26
USP16-206ENST00000485067 FHAD1B1AJZ9 1412 aa13.42□□□□□ -0.26
USP16-206ENST00000485067 TARBP1Q13395 1621 aaKnown RBP13.42□□□□□ -0.26
USP16-206ENST00000485067 TIAM1Q13009 1591 aa13.42□□□□□ -0.26
USP16-206ENST00000485067 GAPVD1Q14C86 1478 aa13.41□□□□□ -0.26
USP16-206ENST00000485067 FHOD3Q2V2M9 1422 aa13.41□□□□□ -0.26
USP16-206ENST00000485067 FKBP8Q14318 412 aa13.41□□□□□ -0.26
USP16-206ENST00000485067 DIEXFQ68CQ4 756 aaKnown RBP13.41□□□□□ -0.26
USP16-206ENST00000485067 EFCAB5A4FU69 1503 aa13.4□□□□□ -0.26
USP16-206ENST00000485067 CTTNBP2Q8WZ74 1663 aa13.4□□□□□ -0.26
USP16-206ENST00000485067 ZNF316A6NFI3 1004 aaPredicted RBP13.39□□□□□ -0.27
USP16-206ENST00000485067 AQRO60306 1485 aaKnown RBP eCLIP13.38□□□□□ -0.27
USP16-206ENST00000485067 CFAP43Q8NDM7 1665 aa13.38□□□□□ -0.27
USP16-206ENST00000485067 CCNB3Q8WWL7 1395 aa13.38□□□□□ -0.27
USP16-206ENST00000485067 HAP1P54257 671 aaPredicted RBP13.37□□□□□ -0.27
USP16-206ENST00000485067 ATP1B4Q9UN42 357 aaPredicted RBP13.37□□□□□ -0.27
USP16-206ENST00000485067 PCF11O94913 1555 aaKnown RBP13.36□□□□□ -0.27
USP16-206ENST00000485067 NEFLP07196 543 aa13.36□□□□□ -0.27
USP16-206ENST00000485067 MRC2Q9UBG0 1479 aa13.36□□□□□ -0.27
USP16-206ENST00000485067 LRRC9Q6ZRR7 1453 aa13.34□□□□□ -0.27
USP16-206ENST00000485067 PIAS4Q8N2W9 510 aaPredicted RBP13.34□□□□□ -0.27
USP16-206ENST00000485067 ZNF608Q9ULD9 1512 aaPredicted RBP13.34□□□□□ -0.27
USP16-206ENST00000485067 FYCO1Q9BQS8 1478 aa13.33□□□□□ -0.28
USP16-206ENST00000485067 DHX57Q6P158 1386 aaKnown RBP13.32□□□□□ -0.28
USP16-206ENST00000485067 PDE4CQ08493 712 aa13.32□□□□□ -0.28
USP16-206ENST00000485067 ITGAEP38570 1179 aa13.32□□□□□ -0.28
USP16-206ENST00000485067 PBRM1Q86U86 1689 aa13.31□□□□□ -0.28
USP16-206ENST00000485067 ACIN1Q9UKV3 1341 aaKnown RBP13.3□□□□□ -0.28
USP16-206ENST00000485067 CASKIN1Q8WXD9 1431 aa13.29□□□□□ -0.28
USP16-206ENST00000485067 FMN1Q68DA7 1419 aa13.28□□□□□ -0.28
USP16-206ENST00000485067 PHLDB1Q86UU1 1377 aa13.28□□□□□ -0.28
USP16-206ENST00000485067 WDR62O43379 1518 aa13.27□□□□□ -0.29
USP16-206ENST00000485067 SAMD9Q5K651 1589 aa13.26□□□□□ -0.29
USP16-206ENST00000485067 LRRIQ1Q96JM4 1722 aa13.25□□□□□ -0.29
USP16-206ENST00000485067 ERCC6Q03468 1493 aa13.25□□□□□ -0.29
USP16-206ENST00000485067 ADAMTS12P58397 1594 aa13.24□□□□□ -0.29
USP16-206ENST00000485067 SNAPC4Q5SXM2 1469 aa13.24□□□□□ -0.29
USP16-206ENST00000485067 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.24□□□□□ -0.29
USP16-206ENST00000485067 THOC2Q8NI27 1593 aaKnown RBP13.22□□□□□ -0.29
USP16-206ENST00000485067 GRIN2BQ13224 1484 aa13.21□□□□□ -0.29
USP16-206ENST00000485067 IFT140Q96RY7 1462 aa13.21□□□□□ -0.29
USP16-206ENST00000485067 NPM2Q86SE8 214 aaKnown RBP13.2□□□□□ -0.3
USP16-206ENST00000485067 SETD5Q9C0A6 1442 aa13.2□□□□□ -0.3
USP16-206ENST00000485067 EIF4G3O43432 1585 aaKnown RBP13.19□□□□□ -0.3
USP16-206ENST00000485067 FAM50AQ14320 339 aaKnown RBP13.19□□□□□ -0.3
USP16-206ENST00000485067 RAB3GAP2Q9H2M9 1393 aa13.19□□□□□ -0.3
USP16-206ENST00000485067 ARID3CA6NKF2 412 aa13.18□□□□□ -0.3
USP16-206ENST00000485067 GTF3C3Q9Y5Q9 886 aa13.17□□□□□ -0.3
USP16-206ENST00000485067 IQGAP2Q13576 1575 aa13.16□□□□□ -0.3
USP16-206ENST00000485067 MAGI3Q5TCQ9 1506 aa13.14□□□□□ -0.31
USP16-206ENST00000485067 MAPKBP1O60336 1514 aa13.13□□□□□ -0.31
USP16-206ENST00000485067 SUPT6HQ7KZ85 1726 aaKnown RBP13.12□□□□□ -0.31
USP16-206ENST00000485067 CCDC18Q5T9S5 1454 aa13.12□□□□□ -0.31
USP16-206ENST00000485067 FGD6Q6ZV73 1430 aa13.12□□□□□ -0.31
USP16-206ENST00000485067 MTUS2Q5JR59 1369 aa13.12□□□□□ -0.31
USP16-206ENST00000485067 EHBP1L1Q8N3D4 1523 aa13.12□□□□□ -0.31
USP16-206ENST00000485067 NEUROD1Q13562 356 aa13.11□□□□□ -0.31
USP16-206ENST00000485067 TAF7LQ5H9L4 462 aa13.11□□□□□ -0.31
USP16-206ENST00000485067 FBLN2P98095 1184 aa13.11□□□□□ -0.31
USP16-206ENST00000485067 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
USP16-206ENST00000485067 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms