RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 CTTNBP2Q8WZ74 1663 aa20.96■□□□□ 0.95
RXRB-205ENST00000483821 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
RXRB-205ENST00000483821 ARHGAP35Q9NRY4 1499 aa20.94■□□□□ 0.94
RXRB-205ENST00000483821 EFCAB5A4FU69 1503 aa20.94■□□□□ 0.94
RXRB-205ENST00000483821 APLP2Q06481 763 aa20.93■□□□□ 0.94
RXRB-205ENST00000483821 FBLN2P98095 1184 aa20.9■□□□□ 0.94
RXRB-205ENST00000483821 ARAP1Q96P48 1450 aa20.89■□□□□ 0.94
RXRB-205ENST00000483821 KIAA0586Q9BVV6 1533 aa20.88■□□□□ 0.93
RXRB-205ENST00000483821 IQGAP2Q13576 1575 aa20.85■□□□□ 0.93
RXRB-205ENST00000483821 TRIM26Q12899 539 aaPredicted RBP20.83■□□□□ 0.93
RXRB-205ENST00000483821 NUP160Q12769 1436 aa20.81■□□□□ 0.92
RXRB-205ENST00000483821 FMN1Q68DA7 1419 aa20.78■□□□□ 0.92
RXRB-205ENST00000483821 P3H3Q8IVL6 736 aa20.78■□□□□ 0.92
RXRB-205ENST00000483821 UGGT2Q9NYU1 1516 aa20.78■□□□□ 0.92
RXRB-205ENST00000483821 SAMD9Q5K651 1589 aa20.77■□□□□ 0.92
RXRB-205ENST00000483821 FHOD3Q2V2M9 1422 aa20.75■□□□□ 0.91
RXRB-205ENST00000483821 CEP170Q5SW79 1584 aa20.73■□□□□ 0.91
RXRB-205ENST00000483821 JPH4Q96JJ6 628 aa20.7■□□□□ 0.9
RXRB-205ENST00000483821 CARMIL2Q6F5E8 1435 aa20.7■□□□□ 0.9
RXRB-205ENST00000483821 PPARGC1BQ86YN6 1023 aaKnown RBP20.69■□□□□ 0.9
RXRB-205ENST00000483821 PCGF6Q9BYE7 350 aa20.69■□□□□ 0.9
RXRB-205ENST00000483821 CASKIN1Q8WXD9 1431 aa20.69■□□□□ 0.9
RXRB-205ENST00000483821 MAP3K1Q13233 1512 aa20.68■□□□□ 0.9
RXRB-205ENST00000483821 FYCO1Q9BQS8 1478 aa20.67■□□□□ 0.9
RXRB-205ENST00000483821 CHD1O14646 1710 aa20.64■□□□□ 0.9
RXRB-205ENST00000483821 ATP1B4Q9UN42 357 aaPredicted RBP20.63■□□□□ 0.89
RXRB-205ENST00000483821 DISP1Q96F81 1524 aa20.62■□□□□ 0.89
RXRB-205ENST00000483821 KIAA0556O60303 1618 aa20.6■□□□□ 0.89
RXRB-205ENST00000483821 PCF11O94913 1555 aaKnown RBP20.59■□□□□ 0.89
RXRB-205ENST00000483821 TTBK1Q5TCY1 1321 aaPredicted RBP20.55■□□□□ 0.88
RXRB-205ENST00000483821 TIAM1Q13009 1591 aa20.55■□□□□ 0.88
RXRB-205ENST00000483821 PRG4Q92954 1404 aaPredicted RBP20.53■□□□□ 0.88
RXRB-205ENST00000483821 KANK4Q5T7N3 995 aaPredicted RBP20.52■□□□□ 0.88
RXRB-205ENST00000483821 CCDC18Q5T9S5 1454 aa20.51■□□□□ 0.87
RXRB-205ENST00000483821 LRRC9Q6ZRR7 1453 aa20.5■□□□□ 0.87
RXRB-205ENST00000483821 HECW1Q76N89 1606 aa20.49■□□□□ 0.87
RXRB-205ENST00000483821 SHROOM2Q13796 1616 aa20.49■□□□□ 0.87
RXRB-205ENST00000483821 CFAP43Q8NDM7 1665 aa20.48■□□□□ 0.87
RXRB-205ENST00000483821 CLASP1Q7Z460 1538 aa20.48■□□□□ 0.87
RXRB-205ENST00000483821 OSCARQ8IYS5 282 aa20.47■□□□□ 0.87
RXRB-205ENST00000483821 PTPRGP23470 1445 aa20.44■□□□□ 0.86
RXRB-205ENST00000483821 CDK11AQ9UQ88 783 aaPredicted RBP20.43■□□□□ 0.86
RXRB-205ENST00000483821 MTUS2Q5JR59 1369 aa20.43■□□□□ 0.86
RXRB-205ENST00000483821 EPRSP07814 1512 aaKnown RBP20.42■□□□□ 0.86
RXRB-205ENST00000483821 RAPGEF6Q8TEU7 1601 aa20.42■□□□□ 0.86
RXRB-205ENST00000483821 NUP153P49790 1475 aaKnown RBP20.36■□□□□ 0.85
RXRB-205ENST00000483821 EHBP1L1Q8N3D4 1523 aa20.35■□□□□ 0.85
RXRB-205ENST00000483821 PLB1Q6P1J6 1458 aa20.35■□□□□ 0.85
RXRB-205ENST00000483821 ABCA8O94911 1581 aa20.34■□□□□ 0.85
RXRB-205ENST00000483821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
RXRB-205ENST00000483821 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
RXRB-205ENST00000483821 RRBP1Q9P2E9 1410 aaKnown RBP20.33■□□□□ 0.84
RXRB-205ENST00000483821 UACAQ9BZF9 1416 aa20.31■□□□□ 0.84
RXRB-205ENST00000483821 CCNB3Q8WWL7 1395 aa20.3■□□□□ 0.84
RXRB-205ENST00000483821 LRRIQ1Q96JM4 1722 aa20.3■□□□□ 0.84
RXRB-205ENST00000483821 CDK13Q14004 1512 aaKnown RBP20.29■□□□□ 0.84
RXRB-205ENST00000483821 ARID3CA6NKF2 412 aa20.27■□□□□ 0.84
RXRB-205ENST00000483821 SUPT6HQ7KZ85 1726 aaKnown RBP20.27■□□□□ 0.83
RXRB-205ENST00000483821 PLEKHD1A6NEE1 506 aa20.26■□□□□ 0.83
RXRB-205ENST00000483821 PHLDB1Q86UU1 1377 aa20.25■□□□□ 0.83
RXRB-205ENST00000483821 ERCC6L2Q5T890 1561 aa20.25■□□□□ 0.83
RXRB-205ENST00000483821 NCOA2Q15596 1464 aa20.24■□□□□ 0.83
RXRB-205ENST00000483821 TROQ12816 1431 aaPredicted RBP20.23■□□□□ 0.83
RXRB-205ENST00000483821 ATP10BO94823 1461 aa20.23■□□□□ 0.83
RXRB-205ENST00000483821 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.22■□□□□ 0.83
RXRB-205ENST00000483821 UHRF1BP1LA0JNW5 1464 aa20.22■□□□□ 0.83
RXRB-205ENST00000483821 MAGI3Q5TCQ9 1506 aa20.21■□□□□ 0.83
RXRB-205ENST00000483821 ABCC2Q92887 1545 aa20.21■□□□□ 0.83
RXRB-205ENST00000483821 MYOM3Q5VTT5 1437 aa20.19■□□□□ 0.82
RXRB-205ENST00000483821 ARHGEF11O15085 1522 aa20.19■□□□□ 0.82
RXRB-205ENST00000483821 FGD6Q6ZV73 1430 aa20.18■□□□□ 0.82
RXRB-205ENST00000483821 FAM50AQ14320 339 aaKnown RBP20.17■□□□□ 0.82
RXRB-205ENST00000483821 MIA2Q96PC5 1412 aa20.15■□□□□ 0.82
RXRB-205ENST00000483821 KDM5BQ9UGL1 1544 aa20.1■□□□□ 0.81
RXRB-205ENST00000483821 ADCY10Q96PN6 1610 aa20.09■□□□□ 0.81
RXRB-205ENST00000483821 KIF14Q15058 1648 aa20.06■□□□□ 0.8
RXRB-205ENST00000483821 NPM1P06748 294 aaKnown RBP eCLIP20.06■□□□□ 0.8
RXRB-205ENST00000483821 ZEB1P37275 1124 aaPredicted RBP20.06■□□□□ 0.8
RXRB-205ENST00000483821 ITGAEP38570 1179 aa20.06■□□□□ 0.8
RXRB-205ENST00000483821 HRCP23327 699 aa20.05■□□□□ 0.8
RXRB-205ENST00000483821 TCOF1Q13428 1488 aaKnown RBP20.05■□□□□ 0.8
RXRB-205ENST00000483821 CFDP1Q9UEE9 299 aaPredicted RBP20.04■□□□□ 0.8
RXRB-205ENST00000483821 PTPN23Q9H3S7 1636 aa20.03■□□□□ 0.8
RXRB-205ENST00000483821 CCER1Q8TC90 406 aaPredicted RBP20.01■□□□□ 0.79
RXRB-205ENST00000483821 GPATCH8Q9UKJ3 1502 aaKnown RBP20.01■□□□□ 0.79
RXRB-205ENST00000483821 ITSN2Q9NZM3 1697 aa20■□□□□ 0.79
RXRB-205ENST00000483821 ZCCHC11Q5TAX3 1644 aaKnown RBP20■□□□□ 0.79
RXRB-205ENST00000483821 ABCC10Q5T3U5 1492 aa19.99■□□□□ 0.79
RXRB-205ENST00000483821 SETD5Q9C0A6 1442 aa19.94■□□□□ 0.78
RXRB-205ENST00000483821 KCNH8Q96L42 1107 aa19.94■□□□□ 0.78
RXRB-205ENST00000483821 WDR7Q9Y4E6 1490 aa19.92■□□□□ 0.78
RXRB-205ENST00000483821 ACIN1Q9UKV3 1341 aaKnown RBP19.91■□□□□ 0.78
RXRB-205ENST00000483821 ZNF777Q9ULD5 760 aaPredicted RBP19.9■□□□□ 0.78
RXRB-205ENST00000483821 RSPH4AQ5TD94 716 aa19.89■□□□□ 0.77
RXRB-205ENST00000483821 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.88■□□□□ 0.77
RXRB-205ENST00000483821 CAMSAP2Q08AD1 1489 aa19.88■□□□□ 0.77
RXRB-205ENST00000483821 ASXL2Q76L83 1435 aa19.87■□□□□ 0.77
RXRB-205ENST00000483821 CYB5RLQ6IPT4 315 aa19.87■□□□□ 0.77
RXRB-205ENST00000483821 CDC42BPAQ5VT25 1732 aa19.87■□□□□ 0.77
RXRB-205ENST00000483821 AKNAQ7Z591 1439 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms