RNA–Protein interactions for RNA: ENST00000483571.5

PCNX4-205, Transcript of pecanex 4, humanhuman

TSL 5

Gene PCNX4, Length 2,347 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-205ENST00000483571 SHROOM2Q13796 1616 aa11.83□□□□□ -0.52
PCNX4-205ENST00000483571 CYB5RLQ6IPT4 315 aa11.8□□□□□ -0.52
PCNX4-205ENST00000483571 CARMIL1Q5VZK9 1371 aa11.78□□□□□ -0.52
PCNX4-205ENST00000483571 RUSC2Q8N2Y8 1516 aa11.78□□□□□ -0.52
PCNX4-205ENST00000483571 KIAA0586Q9BVV6 1533 aa11.78□□□□□ -0.52
PCNX4-205ENST00000483571 JPH4Q96JJ6 628 aa11.75□□□□□ -0.53
PCNX4-205ENST00000483571 PRG4Q92954 1404 aaPredicted RBP11.73□□□□□ -0.53
PCNX4-205ENST00000483571 RAPGEF2Q9Y4G8 1499 aa11.73□□□□□ -0.53
PCNX4-205ENST00000483571 ERCC6L2Q5T890 1561 aa11.7□□□□□ -0.54
PCNX4-205ENST00000483571 EEA1Q15075 1411 aa11.69□□□□□ -0.54
PCNX4-205ENST00000483571 IQGAP2Q13576 1575 aa11.68□□□□□ -0.54
PCNX4-205ENST00000483571 CARMIL2Q6F5E8 1435 aa11.67□□□□□ -0.54
PCNX4-205ENST00000483571 PRXQ9BXM0 1461 aa11.66□□□□□ -0.54
PCNX4-205ENST00000483571 UGGT2Q9NYU1 1516 aa11.64□□□□□ -0.55
PCNX4-205ENST00000483571 TNIKQ9UKE5 1360 aa11.62□□□□□ -0.55
PCNX4-205ENST00000483571 CTTNBP2Q8WZ74 1663 aa11.6□□□□□ -0.55
PCNX4-205ENST00000483571 PTPRGP23470 1445 aa11.6□□□□□ -0.55
PCNX4-205ENST00000483571 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
PCNX4-205ENST00000483571 GOLGA3Q08378 1498 aa11.59□□□□□ -0.55
PCNX4-205ENST00000483571 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
PCNX4-205ENST00000483571 NPM1P06748 294 aaKnown RBP eCLIP11.58□□□□□ -0.56
PCNX4-205ENST00000483571 DISP1Q96F81 1524 aa11.58□□□□□ -0.56
PCNX4-205ENST00000483571 MAPKBP1O60336 1514 aa11.57□□□□□ -0.56
PCNX4-205ENST00000483571 UHRF1BP1LA0JNW5 1464 aa11.57□□□□□ -0.56
PCNX4-205ENST00000483571 KIAA0556O60303 1618 aa11.56□□□□□ -0.56
PCNX4-205ENST00000483571 ADCY10Q96PN6 1610 aa11.56□□□□□ -0.56
PCNX4-205ENST00000483571 FAM9AQ8IZU1 332 aaPredicted RBP11.53□□□□□ -0.56
PCNX4-205ENST00000483571 KIF21BO75037 1637 aa11.53□□□□□ -0.56
PCNX4-205ENST00000483571 ABCC2Q92887 1545 aa11.53□□□□□ -0.56
PCNX4-205ENST00000483571 UACAQ9BZF9 1416 aa11.53□□□□□ -0.56
PCNX4-205ENST00000483571 ABCC10Q5T3U5 1492 aa11.5□□□□□ -0.57
PCNX4-205ENST00000483571 KCNA4P22459 653 aa11.48□□□□□ -0.57
PCNX4-205ENST00000483571 PLB1Q6P1J6 1458 aa11.48□□□□□ -0.57
PCNX4-205ENST00000483571 KDM5BQ9UGL1 1544 aa11.48□□□□□ -0.57
PCNX4-205ENST00000483571 KIF13AQ9H1H9 1805 aa11.47□□□□□ -0.57
PCNX4-205ENST00000483571 SAMD9Q5K651 1589 aa11.46□□□□□ -0.57
PCNX4-205ENST00000483571 DIP2BQ9P265 1576 aa11.46□□□□□ -0.58
PCNX4-205ENST00000483571 ABCA8O94911 1581 aa11.45□□□□□ -0.58
PCNX4-205ENST00000483571 GLI2P10070 1586 aa11.44□□□□□ -0.58
PCNX4-205ENST00000483571 EFCAB5A4FU69 1503 aa11.44□□□□□ -0.58
PCNX4-205ENST00000483571 FAM69CQ0P6D2 419 aa11.43□□□□□ -0.58
PCNX4-205ENST00000483571 ASXL2Q76L83 1435 aa11.43□□□□□ -0.58
PCNX4-205ENST00000483571 ZCCHC11Q5TAX3 1644 aaKnown RBP11.42□□□□□ -0.58
PCNX4-205ENST00000483571 TTBK1Q5TCY1 1321 aaPredicted RBP11.41□□□□□ -0.58
PCNX4-205ENST00000483571 SENP3Q9H4L4 574 aaPredicted RBP11.41□□□□□ -0.58
PCNX4-205ENST00000483571 WDR7Q9Y4E6 1490 aa11.38□□□□□ -0.59
PCNX4-205ENST00000483571 EPRSP07814 1512 aaKnown RBP11.38□□□□□ -0.59
PCNX4-205ENST00000483571 RAPGEF6Q8TEU7 1601 aa11.36□□□□□ -0.59
PCNX4-205ENST00000483571 UBTFP17480 764 aaKnown RBP11.35□□□□□ -0.59
PCNX4-205ENST00000483571 TEX14Q8IWB6 1497 aa11.34□□□□□ -0.59
PCNX4-205ENST00000483571 MAP3K4Q9Y6R4 1608 aa11.34□□□□□ -0.59
PCNX4-205ENST00000483571 ATP10BO94823 1461 aa11.33□□□□□ -0.6
PCNX4-205ENST00000483571 P3H3Q8IVL6 736 aa11.32□□□□□ -0.6
PCNX4-205ENST00000483571 FHOD3Q2V2M9 1422 aa11.32□□□□□ -0.6
PCNX4-205ENST00000483571 FMN1Q68DA7 1419 aa11.32□□□□□ -0.6
PCNX4-205ENST00000483571 CFAP43Q8NDM7 1665 aa11.32□□□□□ -0.6
PCNX4-205ENST00000483571 MAGI3Q5TCQ9 1506 aa11.3□□□□□ -0.6
PCNX4-205ENST00000483571 NUP153P49790 1475 aaKnown RBP11.3□□□□□ -0.6
PCNX4-205ENST00000483571 KDM6BO15054 1643 aa11.3□□□□□ -0.6
PCNX4-205ENST00000483571 PPRC1Q5VV67 1664 aaKnown RBP11.3□□□□□ -0.6
PCNX4-205ENST00000483571 TSPOAP1O95153 1857 aa11.28□□□□□ -0.6
PCNX4-205ENST00000483571 ARHGAP35Q9NRY4 1499 aa11.28□□□□□ -0.6
PCNX4-205ENST00000483571 PHLDB1Q86UU1 1377 aa11.28□□□□□ -0.6
PCNX4-205ENST00000483571 CD109Q6YHK3 1445 aa11.27□□□□□ -0.61
PCNX4-205ENST00000483571 ADRA2BP18089 450 aa11.27□□□□□ -0.61
PCNX4-205ENST00000483571 ABCA9Q8IUA7 1624 aa11.26□□□□□ -0.61
PCNX4-205ENST00000483571 HECW1Q76N89 1606 aa11.26□□□□□ -0.61
PCNX4-205ENST00000483571 RANGAP1P46060 587 aaPredicted RBP11.25□□□□□ -0.61
PCNX4-205ENST00000483571 PLEKHD1A6NEE1 506 aa11.24□□□□□ -0.61
PCNX4-205ENST00000483571 KCNH8Q96L42 1107 aa11.24□□□□□ -0.61
PCNX4-205ENST00000483571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.22□□□□□ -0.61
PCNX4-205ENST00000483571 HNRNPUL2Q1KMD3 747 aaKnown RBP11.22□□□□□ -0.61
PCNX4-205ENST00000483571 CDK11AQ9UQ88 783 aaPredicted RBP11.22□□□□□ -0.61
PCNX4-205ENST00000483571 NEO1Q92859 1461 aa11.21□□□□□ -0.61
PCNX4-205ENST00000483571 ARAP3Q8WWN8 1544 aa11.21□□□□□ -0.61
PCNX4-205ENST00000483571 CASKIN1Q8WXD9 1431 aa11.21□□□□□ -0.62
PCNX4-205ENST00000483571 SLC24A1O60721 1099 aa11.2□□□□□ -0.62
PCNX4-205ENST00000483571 CCDC18Q5T9S5 1454 aa11.2□□□□□ -0.62
PCNX4-205ENST00000483571 CLIP1P30622 1438 aa11.2□□□□□ -0.62
PCNX4-205ENST00000483571 CFAP74Q9C0B2 1584 aa11.19□□□□□ -0.62
PCNX4-205ENST00000483571 FYCO1Q9BQS8 1478 aa11.18□□□□□ -0.62
PCNX4-205ENST00000483571 ARID3CA6NKF2 412 aa11.18□□□□□ -0.62
PCNX4-205ENST00000483571 CDK13Q14004 1512 aaKnown RBP11.16□□□□□ -0.62
PCNX4-205ENST00000483571 COL17A1Q9UMD9 1497 aaPredicted RBP11.16□□□□□ -0.62
PCNX4-205ENST00000483571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.16□□□□□ -0.62
PCNX4-205ENST00000483571 TROQ12816 1431 aaPredicted RBP11.15□□□□□ -0.62
PCNX4-205ENST00000483571 PCF11O94913 1555 aaKnown RBP11.14□□□□□ -0.63
PCNX4-205ENST00000483571 KIF14Q15058 1648 aa11.14□□□□□ -0.63
PCNX4-205ENST00000483571 ATP1B4Q9UN42 357 aaPredicted RBP11.13□□□□□ -0.63
PCNX4-205ENST00000483571 PLCH2O75038 1416 aa11.12□□□□□ -0.63
PCNX4-205ENST00000483571 TTC37Q6PGP7 1564 aa11.12□□□□□ -0.63
PCNX4-205ENST00000483571 CEP162Q5TB80 1403 aa11.11□□□□□ -0.63
PCNX4-205ENST00000483571 FANCAO15360 1455 aa11.11□□□□□ -0.63
PCNX4-205ENST00000483571 AKNAQ7Z591 1439 aa11.1□□□□□ -0.63
PCNX4-205ENST00000483571 LRRIQ1Q96JM4 1722 aa11.1□□□□□ -0.63
PCNX4-205ENST00000483571 MYO5CQ9NQX4 1742 aa11.1□□□□□ -0.63
PCNX4-205ENST00000483571 DENND4BO75064 1496 aaPredicted RBP11.1□□□□□ -0.63
PCNX4-205ENST00000483571 EFCAB2Q5VUJ9 269 aa11.09□□□□□ -0.63
PCNX4-205ENST00000483571 MAGI2Q86UL8 1455 aa11.07□□□□□ -0.64
PCNX4-205ENST00000483571 ZMYM4Q5VZL5 1548 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms