RNA–Protein interactions for RNA: ENST00000483571.5

PCNX4-205, Transcript of pecanex 4, humanhuman

TSL 5

Gene PCNX4, Length 2,347 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-205ENST00000483571 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.31
PCNX4-205ENST00000483571 CCDC180Q9P1Z9 1646 aa15.18■□□□□ 0.02
PCNX4-205ENST00000483571 ABCC9O60706 1549 aa14.79□□□□□ -0.04
PCNX4-205ENST00000483571 RB1CC1Q8TDY2 1594 aa14.31□□□□□ -0.12
PCNX4-205ENST00000483571 NACADO15069 1562 aa14.29□□□□□ -0.12
PCNX4-205ENST00000483571 MYO15BQ96JP2 1530 aa14.24□□□□□ -0.13
PCNX4-205ENST00000483571 CHIC1Q5VXU3 224 aa14.21□□□□□ -0.13
PCNX4-205ENST00000483571 DCAF1Q9Y4B6 1507 aa14.12□□□□□ -0.15
PCNX4-205ENST00000483571 ZCCHC6Q5VYS8 1495 aaKnown RBP14.11□□□□□ -0.15
PCNX4-205ENST00000483571 DCAF8L2P0C7V8 631 aa14.06□□□□□ -0.16
PCNX4-205ENST00000483571 UNC13AQ9UPW8 1703 aa13.89□□□□□ -0.19
PCNX4-205ENST00000483571 SHROOM4Q9ULL8 1493 aa13.84□□□□□ -0.19
PCNX4-205ENST00000483571 BICRAQ9NZM4 1560 aa13.81□□□□□ -0.2
PCNX4-205ENST00000483571 AEBP2Q6ZN18 517 aaPredicted RBP13.77□□□□□ -0.21
PCNX4-205ENST00000483571 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
PCNX4-205ENST00000483571 SCRIBQ14160 1630 aa13.71□□□□□ -0.21
PCNX4-205ENST00000483571 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
PCNX4-205ENST00000483571 EIF4G1Q04637 1599 aaKnown RBP13.47□□□□□ -0.25
PCNX4-205ENST00000483571 CC2D2AQ9P2K1 1620 aa13.42□□□□□ -0.26
PCNX4-205ENST00000483571 CECR2Q9BXF3 1484 aa13.35□□□□□ -0.27
PCNX4-205ENST00000483571 BAZ1AQ9NRL2 1556 aaPredicted RBP13.18□□□□□ -0.3
PCNX4-205ENST00000483571 SMARCA4P51532 1647 aa13.17□□□□□ -0.3
PCNX4-205ENST00000483571 NCAPD3P42695 1498 aa13.17□□□□□ -0.3
PCNX4-205ENST00000483571 SMARCA2P51531 1590 aa13.16□□□□□ -0.3
PCNX4-205ENST00000483571 ATAD2BQ9ULI0 1458 aa13.12□□□□□ -0.31
PCNX4-205ENST00000483571 HMGXB3Q12766 1538 aa13.11□□□□□ -0.31
PCNX4-205ENST00000483571 PEG3Q9GZU2 1588 aa13.1□□□□□ -0.31
PCNX4-205ENST00000483571 MROH2BQ7Z745 1585 aa13.02□□□□□ -0.33
PCNX4-205ENST00000483571 BAZ1BQ9UIG0 1483 aaKnown RBP13.01□□□□□ -0.33
PCNX4-205ENST00000483571 RSF1Q96T23 1441 aaPredicted RBP12.86□□□□□ -0.35
PCNX4-205ENST00000483571 WIZO95785 1651 aa12.85□□□□□ -0.35
PCNX4-205ENST00000483571 LAMC3Q9Y6N6 1575 aa12.84□□□□□ -0.35
PCNX4-205ENST00000483571 ERCC6Q03468 1493 aa12.8□□□□□ -0.36
PCNX4-205ENST00000483571 TOP2AP11388 1531 aaKnown RBP12.79□□□□□ -0.36
PCNX4-205ENST00000483571 CUX2O14529 1486 aa12.78□□□□□ -0.36
PCNX4-205ENST00000483571 CADPSQ9ULU8 1353 aa12.76□□□□□ -0.37
PCNX4-205ENST00000483571 PDS5BQ9NTI5 1447 aa12.76□□□□□ -0.37
PCNX4-205ENST00000483571 NESP48681 1621 aa12.75□□□□□ -0.37
PCNX4-205ENST00000483571 PHF23Q9BUL5 403 aaPredicted RBP12.68□□□□□ -0.38
PCNX4-205ENST00000483571 CFTRP13569 1480 aa12.67□□□□□ -0.38
PCNX4-205ENST00000483571 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
PCNX4-205ENST00000483571 KIF21AQ7Z4S6 1674 aa12.64□□□□□ -0.39
PCNX4-205ENST00000483571 MRC2Q9UBG0 1479 aa12.61□□□□□ -0.39
PCNX4-205ENST00000483571 CCDC88BA6NC98 1476 aa12.6□□□□□ -0.39
PCNX4-205ENST00000483571 CEP164Q9UPV0 1460 aa12.6□□□□□ -0.39
PCNX4-205ENST00000483571 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
PCNX4-205ENST00000483571 PRDM2Q13029 1718 aa12.58□□□□□ -0.4
PCNX4-205ENST00000483571 WDR62O43379 1518 aa12.58□□□□□ -0.4
PCNX4-205ENST00000483571 ABCC8Q09428 1581 aa12.47□□□□□ -0.41
PCNX4-205ENST00000483571 URB2Q14146 1524 aaKnown RBP12.44□□□□□ -0.42
PCNX4-205ENST00000483571 DNAJC5Q9H3Z4 198 aa12.42□□□□□ -0.42
PCNX4-205ENST00000483571 DNMBPQ6XZF7 1577 aa12.39□□□□□ -0.43
PCNX4-205ENST00000483571 TOPBP1Q92547 1522 aa12.37□□□□□ -0.43
PCNX4-205ENST00000483571 IFT140Q96RY7 1462 aa12.37□□□□□ -0.43
PCNX4-205ENST00000483571 SUPT5HO00267 1087 aaKnown RBP12.36□□□□□ -0.43
PCNX4-205ENST00000483571 WDR97A6NE52 1622 aa12.27□□□□□ -0.44
PCNX4-205ENST00000483571 TARBP1Q13395 1621 aaKnown RBP12.25□□□□□ -0.45
PCNX4-205ENST00000483571 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
PCNX4-205ENST00000483571 CUX1P39880 1505 aa12.23□□□□□ -0.45
PCNX4-205ENST00000483571 ZNF608Q9ULD9 1512 aaPredicted RBP12.21□□□□□ -0.45
PCNX4-205ENST00000483571 SOGA1O94964 1423 aa12.21□□□□□ -0.45
PCNX4-205ENST00000483571 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.46
PCNX4-205ENST00000483571 EIF4G3O43432 1585 aaKnown RBP12.2□□□□□ -0.46
PCNX4-205ENST00000483571 OSCARQ8IYS5 282 aa12.18□□□□□ -0.46
PCNX4-205ENST00000483571 RAD54L2Q9Y4B4 1467 aa12.15□□□□□ -0.46
PCNX4-205ENST00000483571 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.46
PCNX4-205ENST00000483571 TOP2BQ02880 1626 aa12.14□□□□□ -0.47
PCNX4-205ENST00000483571 AQRO60306 1485 aaKnown RBP eCLIP12.14□□□□□ -0.47
PCNX4-205ENST00000483571 WRNQ14191 1432 aaPredicted RBP eCLIP12.14□□□□□ -0.47
PCNX4-205ENST00000483571 ABCA10Q8WWZ4 1543 aa12.13□□□□□ -0.47
PCNX4-205ENST00000483571 GRIN2BQ13224 1484 aa12.12□□□□□ -0.47
PCNX4-205ENST00000483571 MAGI1Q96QZ7 1491 aaPredicted RBP12.11□□□□□ -0.47
PCNX4-205ENST00000483571 TDRD9Q8NDG6 1382 aaKnown RBP12.1□□□□□ -0.47
PCNX4-205ENST00000483571 GAPVD1Q14C86 1478 aa12.08□□□□□ -0.48
PCNX4-205ENST00000483571 ABCA5Q8WWZ7 1642 aa12.07□□□□□ -0.48
PCNX4-205ENST00000483571 SYNJ1O43426 1573 aa12.07□□□□□ -0.48
PCNX4-205ENST00000483571 SNAPC4Q5SXM2 1469 aa12.06□□□□□ -0.48
PCNX4-205ENST00000483571 CHD1O14646 1710 aa12.05□□□□□ -0.48
PCNX4-205ENST00000483571 PBRM1Q86U86 1689 aa12.05□□□□□ -0.48
PCNX4-205ENST00000483571 SYNJ2O15056 1496 aa12.04□□□□□ -0.48
PCNX4-205ENST00000483571 CHMP7Q8WUX9 453 aaPredicted RBP12□□□□□ -0.49
PCNX4-205ENST00000483571 ERICH3Q5RHP9 1530 aa12□□□□□ -0.49
PCNX4-205ENST00000483571 FBLN2P98095 1184 aa11.99□□□□□ -0.49
PCNX4-205ENST00000483571 CLASP1Q7Z460 1538 aa11.97□□□□□ -0.49
PCNX4-205ENST00000483571 FHAD1B1AJZ9 1412 aa11.97□□□□□ -0.49
PCNX4-205ENST00000483571 ADAMTS12P58397 1594 aa11.96□□□□□ -0.49
PCNX4-205ENST00000483571 RIMBP3CA6NJZ7 1639 aa11.96□□□□□ -0.49
PCNX4-205ENST00000483571 RIMBP3BA6NNM3 1639 aa11.96□□□□□ -0.49
PCNX4-205ENST00000483571 RIMBP3Q9UFD9 1639 aa11.96□□□□□ -0.49
PCNX4-205ENST00000483571 ARHGEF11O15085 1522 aa11.96□□□□□ -0.5
PCNX4-205ENST00000483571 GRIN2AQ12879 1464 aa11.94□□□□□ -0.5
PCNX4-205ENST00000483571 KIF27Q86VH2 1401 aa11.92□□□□□ -0.5
PCNX4-205ENST00000483571 PLPPR3Q6T4P5 718 aa11.91□□□□□ -0.5
PCNX4-205ENST00000483571 NUP160Q12769 1436 aa11.91□□□□□ -0.5
PCNX4-205ENST00000483571 CUL7Q14999 1698 aa11.88□□□□□ -0.51
PCNX4-205ENST00000483571 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
PCNX4-205ENST00000483571 IGF1RP08069 1367 aa11.85□□□□□ -0.51
PCNX4-205ENST00000483571 EHMT2Q96KQ7 1210 aa11.85□□□□□ -0.51
PCNX4-205ENST00000483571 CEP170Q5SW79 1584 aa11.85□□□□□ -0.51
PCNX4-205ENST00000483571 ARAP1Q96P48 1450 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms