RNA–Protein interactions for RNA: ENST00000482338.5

ERGIC3-214, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-214ENST00000482338 IQGAP2Q13576 1575 aa14.14□□□□□ -0.15
ERGIC3-214ENST00000482338 CLIP1P30622 1438 aa14.13□□□□□ -0.15
ERGIC3-214ENST00000482338 SAMD9Q5K651 1589 aa14.1□□□□□ -0.15
ERGIC3-214ENST00000482338 ARHGAP35Q9NRY4 1499 aa14.09□□□□□ -0.15
ERGIC3-214ENST00000482338 NUP160Q12769 1436 aa14.08□□□□□ -0.15
ERGIC3-214ENST00000482338 ARAP1Q96P48 1450 aa14.08□□□□□ -0.16
ERGIC3-214ENST00000482338 EFCAB5A4FU69 1503 aa14.08□□□□□ -0.16
ERGIC3-214ENST00000482338 RANGAP1P46060 587 aaPredicted RBP14.07□□□□□ -0.16
ERGIC3-214ENST00000482338 CHMP7Q8WUX9 453 aaPredicted RBP14.07□□□□□ -0.16
ERGIC3-214ENST00000482338 KIAA0586Q9BVV6 1533 aa14.05□□□□□ -0.16
ERGIC3-214ENST00000482338 FBLN2P98095 1184 aa14.04□□□□□ -0.16
ERGIC3-214ENST00000482338 UGGT2Q9NYU1 1516 aa14.04□□□□□ -0.16
ERGIC3-214ENST00000482338 KIAA0556O60303 1618 aa14.01□□□□□ -0.17
ERGIC3-214ENST00000482338 SHROOM2Q13796 1616 aa14.01□□□□□ -0.17
ERGIC3-214ENST00000482338 VPS8Q8N3P4 1428 aa14□□□□□ -0.17
ERGIC3-214ENST00000482338 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
ERGIC3-214ENST00000482338 LRRIQ1Q96JM4 1722 aa13.98□□□□□ -0.17
ERGIC3-214ENST00000482338 FHOD3Q2V2M9 1422 aa13.98□□□□□ -0.17
ERGIC3-214ENST00000482338 PCF11O94913 1555 aaKnown RBP13.97□□□□□ -0.17
ERGIC3-214ENST00000482338 DISP1Q96F81 1524 aa13.96□□□□□ -0.17
ERGIC3-214ENST00000482338 CFAP43Q8NDM7 1665 aa13.93□□□□□ -0.18
ERGIC3-214ENST00000482338 P3H3Q8IVL6 736 aa13.92□□□□□ -0.18
ERGIC3-214ENST00000482338 ERCC6L2Q5T890 1561 aa13.88□□□□□ -0.19
ERGIC3-214ENST00000482338 FYCO1Q9BQS8 1478 aa13.88□□□□□ -0.19
ERGIC3-214ENST00000482338 FMN1Q68DA7 1419 aa13.88□□□□□ -0.19
ERGIC3-214ENST00000482338 JPH4Q96JJ6 628 aa13.87□□□□□ -0.19
ERGIC3-214ENST00000482338 HECW1Q76N89 1606 aa13.86□□□□□ -0.19
ERGIC3-214ENST00000482338 RAPGEF6Q8TEU7 1601 aa13.86□□□□□ -0.19
ERGIC3-214ENST00000482338 CARMIL2Q6F5E8 1435 aa13.86□□□□□ -0.19
ERGIC3-214ENST00000482338 TIAM1Q13009 1591 aa13.85□□□□□ -0.19
ERGIC3-214ENST00000482338 PRG4Q92954 1404 aaPredicted RBP13.85□□□□□ -0.19
ERGIC3-214ENST00000482338 CASKIN1Q8WXD9 1431 aa13.84□□□□□ -0.19
ERGIC3-214ENST00000482338 MAP3K1Q13233 1512 aa13.81□□□□□ -0.2
ERGIC3-214ENST00000482338 ABCA8O94911 1581 aa13.79□□□□□ -0.2
ERGIC3-214ENST00000482338 PPARGC1BQ86YN6 1023 aaKnown RBP13.78□□□□□ -0.2
ERGIC3-214ENST00000482338 PLB1Q6P1J6 1458 aa13.77□□□□□ -0.21
ERGIC3-214ENST00000482338 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
ERGIC3-214ENST00000482338 CDK13Q14004 1512 aaKnown RBP13.75□□□□□ -0.21
ERGIC3-214ENST00000482338 NUP153P49790 1475 aaKnown RBP13.75□□□□□ -0.21
ERGIC3-214ENST00000482338 CCDC18Q5T9S5 1454 aa13.75□□□□□ -0.21
ERGIC3-214ENST00000482338 TTBK1Q5TCY1 1321 aaPredicted RBP13.75□□□□□ -0.21
ERGIC3-214ENST00000482338 APLP2Q06481 763 aa13.75□□□□□ -0.21
ERGIC3-214ENST00000482338 EPRSP07814 1512 aaKnown RBP13.74□□□□□ -0.21
ERGIC3-214ENST00000482338 LRRC9Q6ZRR7 1453 aa13.73□□□□□ -0.21
ERGIC3-214ENST00000482338 ATP1B4Q9UN42 357 aaPredicted RBP13.72□□□□□ -0.21
ERGIC3-214ENST00000482338 MAGI3Q5TCQ9 1506 aa13.72□□□□□ -0.21
ERGIC3-214ENST00000482338 PTPRGP23470 1445 aa13.72□□□□□ -0.21
ERGIC3-214ENST00000482338 SUPT6HQ7KZ85 1726 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-214ENST00000482338 EHBP1L1Q8N3D4 1523 aa13.7□□□□□ -0.22
ERGIC3-214ENST00000482338 ABCC2Q92887 1545 aa13.7□□□□□ -0.22
ERGIC3-214ENST00000482338 KANK4Q5T7N3 995 aaPredicted RBP13.7□□□□□ -0.22
ERGIC3-214ENST00000482338 RIMBP3CA6NJZ7 1639 aa13.68□□□□□ -0.22
ERGIC3-214ENST00000482338 RIMBP3BA6NNM3 1639 aa13.68□□□□□ -0.22
ERGIC3-214ENST00000482338 ADCY10Q96PN6 1610 aa13.68□□□□□ -0.22
ERGIC3-214ENST00000482338 RIMBP3Q9UFD9 1639 aa13.68□□□□□ -0.22
ERGIC3-214ENST00000482338 ARHGEF11O15085 1522 aa13.68□□□□□ -0.22
ERGIC3-214ENST00000482338 ZCCHC11Q5TAX3 1644 aaKnown RBP13.68□□□□□ -0.22
ERGIC3-214ENST00000482338 UACAQ9BZF9 1416 aa13.66□□□□□ -0.22
ERGIC3-214ENST00000482338 UHRF1BP1LA0JNW5 1464 aa13.64□□□□□ -0.23
ERGIC3-214ENST00000482338 ATP10BO94823 1461 aa13.63□□□□□ -0.23
ERGIC3-214ENST00000482338 ARID3CA6NKF2 412 aa13.63□□□□□ -0.23
ERGIC3-214ENST00000482338 KIF14Q15058 1648 aa13.63□□□□□ -0.23
ERGIC3-214ENST00000482338 MTUS2Q5JR59 1369 aa13.62□□□□□ -0.23
ERGIC3-214ENST00000482338 TRIM26Q12899 539 aaPredicted RBP13.62□□□□□ -0.23
ERGIC3-214ENST00000482338 KDM5BQ9UGL1 1544 aa13.59□□□□□ -0.23
ERGIC3-214ENST00000482338 CDC42BPAQ5VT25 1732 aa13.59□□□□□ -0.23
ERGIC3-214ENST00000482338 NCOA2Q15596 1464 aa13.59□□□□□ -0.23
ERGIC3-214ENST00000482338 ITSN2Q9NZM3 1697 aa13.59□□□□□ -0.23
ERGIC3-214ENST00000482338 TROQ12816 1431 aaPredicted RBP13.57□□□□□ -0.24
ERGIC3-214ENST00000482338 PCGF6Q9BYE7 350 aa13.57□□□□□ -0.24
ERGIC3-214ENST00000482338 PHLDB1Q86UU1 1377 aa13.57□□□□□ -0.24
ERGIC3-214ENST00000482338 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
ERGIC3-214ENST00000482338 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.55□□□□□ -0.24
ERGIC3-214ENST00000482338 HNRNPUL2Q1KMD3 747 aaKnown RBP13.55□□□□□ -0.24
ERGIC3-214ENST00000482338 MYO5CQ9NQX4 1742 aa13.53□□□□□ -0.24
ERGIC3-214ENST00000482338 PTPN23Q9H3S7 1636 aa13.53□□□□□ -0.24
ERGIC3-214ENST00000482338 CDC42BPBQ9Y5S2 1711 aa13.53□□□□□ -0.24
ERGIC3-214ENST00000482338 CDK11AQ9UQ88 783 aaPredicted RBP13.52□□□□□ -0.25
ERGIC3-214ENST00000482338 TTC37Q6PGP7 1564 aa13.52□□□□□ -0.25
ERGIC3-214ENST00000482338 PREX2Q70Z35 1606 aa13.51□□□□□ -0.25
ERGIC3-214ENST00000482338 MYOM3Q5VTT5 1437 aa13.51□□□□□ -0.25
ERGIC3-214ENST00000482338 ABCC10Q5T3U5 1492 aa13.5□□□□□ -0.25
ERGIC3-214ENST00000482338 FGD6Q6ZV73 1430 aa13.5□□□□□ -0.25
ERGIC3-214ENST00000482338 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.49□□□□□ -0.25
ERGIC3-214ENST00000482338 CCNB3Q8WWL7 1395 aa13.48□□□□□ -0.25
ERGIC3-214ENST00000482338 PLEKHD1A6NEE1 506 aa13.48□□□□□ -0.25
ERGIC3-214ENST00000482338 WDR7Q9Y4E6 1490 aa13.47□□□□□ -0.25
ERGIC3-214ENST00000482338 ABCA9Q8IUA7 1624 aa13.46□□□□□ -0.26
ERGIC3-214ENST00000482338 CROCC2H7BZ55 1655 aa13.45□□□□□ -0.26
ERGIC3-214ENST00000482338 TCOF1Q13428 1488 aaKnown RBP13.45□□□□□ -0.26
ERGIC3-214ENST00000482338 GPATCH8Q9UKJ3 1502 aaKnown RBP13.44□□□□□ -0.26
ERGIC3-214ENST00000482338 ASXL2Q76L83 1435 aa13.44□□□□□ -0.26
ERGIC3-214ENST00000482338 MIA2Q96PC5 1412 aa13.43□□□□□ -0.26
ERGIC3-214ENST00000482338 MAPKBP1O60336 1514 aa13.43□□□□□ -0.26
ERGIC3-214ENST00000482338 CYB5RLQ6IPT4 315 aa13.42□□□□□ -0.26
ERGIC3-214ENST00000482338 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.42□□□□□ -0.26
ERGIC3-214ENST00000482338 DNMT1P26358 1616 aaKnown RBP13.42□□□□□ -0.26
ERGIC3-214ENST00000482338 CAMSAP2Q08AD1 1489 aa13.41□□□□□ -0.26
ERGIC3-214ENST00000482338 SAMD9LQ8IVG5 1584 aa13.41□□□□□ -0.26
ERGIC3-214ENST00000482338 ADGBQ8N7X0 1667 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms