RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PRG4Q92954 1404 aaPredicted RBP18.09■□□□□ 0.49
CPSF4-212ENST00000482251 JPH4Q96JJ6 628 aa18.04■□□□□ 0.48
CPSF4-212ENST00000482251 CARMIL1Q5VZK9 1371 aa18.03■□□□□ 0.48
CPSF4-212ENST00000482251 KIAA0586Q9BVV6 1533 aa18■□□□□ 0.47
CPSF4-212ENST00000482251 IQGAP2Q13576 1575 aa17.92■□□□□ 0.46
CPSF4-212ENST00000482251 RAPGEF2Q9Y4G8 1499 aa17.9■□□□□ 0.46
CPSF4-212ENST00000482251 ADCY10Q96PN6 1610 aa17.9■□□□□ 0.46
CPSF4-212ENST00000482251 TTBK1Q5TCY1 1321 aaPredicted RBP17.89■□□□□ 0.45
CPSF4-212ENST00000482251 KIF13AQ9H1H9 1805 aa17.84■□□□□ 0.45
CPSF4-212ENST00000482251 CARMIL2Q6F5E8 1435 aa17.82■□□□□ 0.44
CPSF4-212ENST00000482251 CTTNBP2Q8WZ74 1663 aa17.81■□□□□ 0.44
CPSF4-212ENST00000482251 PTPRGP23470 1445 aa17.81■□□□□ 0.44
CPSF4-212ENST00000482251 DISP1Q96F81 1524 aa17.8■□□□□ 0.44
CPSF4-212ENST00000482251 TNIKQ9UKE5 1360 aa17.79■□□□□ 0.44
CPSF4-212ENST00000482251 MAPKBP1O60336 1514 aa17.78■□□□□ 0.44
CPSF4-212ENST00000482251 NPM1P06748 294 aaKnown RBP eCLIP17.78■□□□□ 0.44
CPSF4-212ENST00000482251 UGGT2Q9NYU1 1516 aa17.77■□□□□ 0.44
CPSF4-212ENST00000482251 KIAA0556O60303 1618 aa17.77■□□□□ 0.44
CPSF4-212ENST00000482251 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
CPSF4-212ENST00000482251 DIP2BQ9P265 1576 aa17.75■□□□□ 0.43
CPSF4-212ENST00000482251 ABCC10Q5T3U5 1492 aa17.74■□□□□ 0.43
CPSF4-212ENST00000482251 FAM69CQ0P6D2 419 aa17.72■□□□□ 0.43
CPSF4-212ENST00000482251 ABCC2Q92887 1545 aa17.71■□□□□ 0.43
CPSF4-212ENST00000482251 UACAQ9BZF9 1416 aa17.69■□□□□ 0.42
CPSF4-212ENST00000482251 UHRF1BP1LA0JNW5 1464 aa17.66■□□□□ 0.42
CPSF4-212ENST00000482251 TSPOAP1O95153 1857 aa17.66■□□□□ 0.42
CPSF4-212ENST00000482251 ZCCHC11Q5TAX3 1644 aaKnown RBP17.64■□□□□ 0.41
CPSF4-212ENST00000482251 ASXL2Q76L83 1435 aa17.64■□□□□ 0.41
CPSF4-212ENST00000482251 GOLGA3Q08378 1498 aa17.63■□□□□ 0.41
CPSF4-212ENST00000482251 FAM9AQ8IZU1 332 aaPredicted RBP17.63■□□□□ 0.41
CPSF4-212ENST00000482251 CSRNP3Q8WYN3 585 aa17.63■□□□□ 0.41
CPSF4-212ENST00000482251 PLB1Q6P1J6 1458 aa17.63■□□□□ 0.41
CPSF4-212ENST00000482251 EEA1Q15075 1411 aa17.6■□□□□ 0.41
CPSF4-212ENST00000482251 KDM5BQ9UGL1 1544 aa17.6■□□□□ 0.41
CPSF4-212ENST00000482251 ABCA8O94911 1581 aa17.57■□□□□ 0.4
CPSF4-212ENST00000482251 P3H3Q8IVL6 736 aa17.56■□□□□ 0.4
CPSF4-212ENST00000482251 KDM6BO15054 1643 aa17.56■□□□□ 0.4
CPSF4-212ENST00000482251 RANGAP1P46060 587 aaPredicted RBP17.54■□□□□ 0.4
CPSF4-212ENST00000482251 GLI2P10070 1586 aa17.53■□□□□ 0.4
CPSF4-212ENST00000482251 SAMD9Q5K651 1589 aa17.53■□□□□ 0.4
CPSF4-212ENST00000482251 EPRSP07814 1512 aaKnown RBP17.53■□□□□ 0.4
CPSF4-212ENST00000482251 PPRC1Q5VV67 1664 aaKnown RBP17.53■□□□□ 0.4
CPSF4-212ENST00000482251 KIF21BO75037 1637 aa17.51■□□□□ 0.39
CPSF4-212ENST00000482251 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
CPSF4-212ENST00000482251 WDR7Q9Y4E6 1490 aa17.5■□□□□ 0.39
CPSF4-212ENST00000482251 ARID3CA6NKF2 412 aa17.5■□□□□ 0.39
CPSF4-212ENST00000482251 EHMT2Q96KQ7 1210 aa17.5■□□□□ 0.39
CPSF4-212ENST00000482251 MAP3K4Q9Y6R4 1608 aa17.5■□□□□ 0.39
CPSF4-212ENST00000482251 AEBP2Q6ZN18 517 aaPredicted RBP17.49■□□□□ 0.39
CPSF4-212ENST00000482251 FHOD3Q2V2M9 1422 aa17.46■□□□□ 0.39
CPSF4-212ENST00000482251 RAPGEF6Q8TEU7 1601 aa17.44■□□□□ 0.38
CPSF4-212ENST00000482251 KCNH8Q96L42 1107 aa17.4■□□□□ 0.38
CPSF4-212ENST00000482251 ATP10BO94823 1461 aa17.39■□□□□ 0.37
CPSF4-212ENST00000482251 TEX14Q8IWB6 1497 aa17.39■□□□□ 0.37
CPSF4-212ENST00000482251 CFAP43Q8NDM7 1665 aa17.39■□□□□ 0.37
CPSF4-212ENST00000482251 EFCAB5A4FU69 1503 aa17.38■□□□□ 0.37
CPSF4-212ENST00000482251 NUP153P49790 1475 aaKnown RBP17.37■□□□□ 0.37
CPSF4-212ENST00000482251 COL17A1Q9UMD9 1497 aaPredicted RBP17.37■□□□□ 0.37
CPSF4-212ENST00000482251 UBTFP17480 764 aaKnown RBP17.35■□□□□ 0.37
CPSF4-212ENST00000482251 CD109Q6YHK3 1445 aa17.35■□□□□ 0.37
CPSF4-212ENST00000482251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
CPSF4-212ENST00000482251 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
CPSF4-212ENST00000482251 MAGI3Q5TCQ9 1506 aa17.31■□□□□ 0.36
CPSF4-212ENST00000482251 ABCA9Q8IUA7 1624 aa17.29■□□□□ 0.36
CPSF4-212ENST00000482251 ARHGAP35Q9NRY4 1499 aa17.27■□□□□ 0.36
CPSF4-212ENST00000482251 CDK13Q14004 1512 aaKnown RBP17.26■□□□□ 0.35
CPSF4-212ENST00000482251 KDM4FA0A1W2PPD8 638 aa17.23■□□□□ 0.35
CPSF4-212ENST00000482251 HECW1Q76N89 1606 aa17.21■□□□□ 0.35
CPSF4-212ENST00000482251 ATP1B4Q9UN42 357 aaPredicted RBP17.21■□□□□ 0.35
CPSF4-212ENST00000482251 ADGRL1O94910 1474 aa17.2■□□□□ 0.34
CPSF4-212ENST00000482251 FMN1Q68DA7 1419 aa17.2■□□□□ 0.34
CPSF4-212ENST00000482251 TTC37Q6PGP7 1564 aa17.19■□□□□ 0.34
CPSF4-212ENST00000482251 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.17■□□□□ 0.34
CPSF4-212ENST00000482251 PLEKHD1A6NEE1 506 aa17.17■□□□□ 0.34
CPSF4-212ENST00000482251 ARAP3Q8WWN8 1544 aa17.16■□□□□ 0.34
CPSF4-212ENST00000482251 PCF11O94913 1555 aaKnown RBP17.15■□□□□ 0.34
CPSF4-212ENST00000482251 NEO1Q92859 1461 aa17.14■□□□□ 0.33
CPSF4-212ENST00000482251 LRRIQ1Q96JM4 1722 aa17.14■□□□□ 0.33
CPSF4-212ENST00000482251 FRMPD1Q5SYB0 1578 aa17.13■□□□□ 0.33
CPSF4-212ENST00000482251 RAPGEF3O95398 923 aa17.11■□□□□ 0.33
CPSF4-212ENST00000482251 FANCAO15360 1455 aa17.11■□□□□ 0.33
CPSF4-212ENST00000482251 KIF14Q15058 1648 aa17.1■□□□□ 0.33
CPSF4-212ENST00000482251 CFAP74Q9C0B2 1584 aa17.1■□□□□ 0.33
CPSF4-212ENST00000482251 PHLDB1Q86UU1 1377 aa17.08■□□□□ 0.32
CPSF4-212ENST00000482251 CLIP1P30622 1438 aa17.06■□□□□ 0.32
CPSF4-212ENST00000482251 RICTORQ6R327 1708 aa17.06■□□□□ 0.32
CPSF4-212ENST00000482251 AKNAQ7Z591 1439 aa17.05■□□□□ 0.32
CPSF4-212ENST00000482251 MYO5CQ9NQX4 1742 aa17.05■□□□□ 0.32
CPSF4-212ENST00000482251 DENND4BO75064 1496 aaPredicted RBP17.04■□□□□ 0.32
CPSF4-212ENST00000482251 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
CPSF4-212ENST00000482251 CASKIN1Q8WXD9 1431 aa17.04■□□□□ 0.32
CPSF4-212ENST00000482251 ARHGEF40Q8TER5 1519 aa17.02■□□□□ 0.32
CPSF4-212ENST00000482251 CCDC18Q5T9S5 1454 aa17.01■□□□□ 0.31
CPSF4-212ENST00000482251 FYCO1Q9BQS8 1478 aa17.01■□□□□ 0.31
CPSF4-212ENST00000482251 CDK11AQ9UQ88 783 aaPredicted RBP17.01■□□□□ 0.31
CPSF4-212ENST00000482251 PLCH2O75038 1416 aa17.01■□□□□ 0.31
CPSF4-212ENST00000482251 ARHGAP5Q13017 1502 aa16.99■□□□□ 0.31
CPSF4-212ENST00000482251 ZMYM4Q5VZL5 1548 aa16.97■□□□□ 0.31
CPSF4-212ENST00000482251 POGZQ7Z3K3 1410 aa16.96■□□□□ 0.31
CPSF4-212ENST00000482251 SCAPERQ9BY12 1400 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms