RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 JPH4Q96JJ6 628 aa27.17■■□□□ 1.94
HDAC6-224ENST00000481929 NPM1P06748 294 aaKnown RBP eCLIP27.15■■□□□ 1.94
HDAC6-224ENST00000481929 MAPKBP1O60336 1514 aa27.11■■□□□ 1.93
HDAC6-224ENST00000481929 DIP2BQ9P265 1576 aa27.09■■□□□ 1.93
HDAC6-224ENST00000481929 RUSC2Q8N2Y8 1516 aa27.06■■□□□ 1.92
HDAC6-224ENST00000481929 KDM6BO15054 1643 aa27.05■■□□□ 1.92
HDAC6-224ENST00000481929 KDM4FA0A1W2PPD8 638 aa27.04■■□□□ 1.92
HDAC6-224ENST00000481929 ADCY10Q96PN6 1610 aa27.01■■□□□ 1.92
HDAC6-224ENST00000481929 SUPT5HO00267 1087 aaKnown RBP26.95■■□□□ 1.9
HDAC6-224ENST00000481929 TSPOAP1O95153 1857 aa26.91■■□□□ 1.9
HDAC6-224ENST00000481929 ILDR1Q86SU0 546 aaPredicted RBP26.91■■□□□ 1.9
HDAC6-224ENST00000481929 KIAA0586Q9BVV6 1533 aa26.85■■□□□ 1.89
HDAC6-224ENST00000481929 PTPRGP23470 1445 aa26.74■■□□□ 1.87
HDAC6-224ENST00000481929 ADGRL1O94910 1474 aa26.7■■□□□ 1.87
HDAC6-224ENST00000481929 IGF1RP08069 1367 aa26.7■■□□□ 1.86
HDAC6-224ENST00000481929 ABCC2Q92887 1545 aa26.7■■□□□ 1.86
HDAC6-224ENST00000481929 CUL7Q14999 1698 aa26.7■■□□□ 1.86
HDAC6-224ENST00000481929 TTBK1Q5TCY1 1321 aaPredicted RBP26.68■■□□□ 1.86
HDAC6-224ENST00000481929 PLB1Q6P1J6 1458 aa26.67■■□□□ 1.86
HDAC6-224ENST00000481929 ASXL2Q76L83 1435 aa26.66■■□□□ 1.86
HDAC6-224ENST00000481929 GLI2P10070 1586 aa26.66■■□□□ 1.86
HDAC6-224ENST00000481929 KIF27Q86VH2 1401 aa26.65■■□□□ 1.86
HDAC6-224ENST00000481929 PPRC1Q5VV67 1664 aaKnown RBP26.65■■□□□ 1.86
HDAC6-224ENST00000481929 TNIKQ9UKE5 1360 aa26.64■■□□□ 1.86
HDAC6-224ENST00000481929 CARMIL2Q6F5E8 1435 aa26.64■■□□□ 1.85
HDAC6-224ENST00000481929 UHRF1BP1LA0JNW5 1464 aa26.55■■□□□ 1.84
HDAC6-224ENST00000481929 HECW2Q9P2P5 1572 aa26.54■■□□□ 1.84
HDAC6-224ENST00000481929 COL17A1Q9UMD9 1497 aaPredicted RBP26.53■■□□□ 1.84
HDAC6-224ENST00000481929 CARMIL1Q5VZK9 1371 aa26.52■■□□□ 1.84
HDAC6-224ENST00000481929 UACAQ9BZF9 1416 aa26.52■■□□□ 1.84
HDAC6-224ENST00000481929 IQGAP2Q13576 1575 aa26.5■■□□□ 1.83
HDAC6-224ENST00000481929 TEX14Q8IWB6 1497 aa26.5■■□□□ 1.83
HDAC6-224ENST00000481929 EPRSP07814 1512 aaKnown RBP26.49■■□□□ 1.83
HDAC6-224ENST00000481929 MAP3K4Q9Y6R4 1608 aa26.48■■□□□ 1.83
HDAC6-224ENST00000481929 KDM5BQ9UGL1 1544 aa26.44■■□□□ 1.82
HDAC6-224ENST00000481929 DISP1Q96F81 1524 aa26.41■■□□□ 1.82
HDAC6-224ENST00000481929 ZCCHC11Q5TAX3 1644 aaKnown RBP26.38■■□□□ 1.81
HDAC6-224ENST00000481929 WDR7Q9Y4E6 1490 aa26.3■■□□□ 1.8
HDAC6-224ENST00000481929 UGGT2Q9NYU1 1516 aa26.3■■□□□ 1.8
HDAC6-224ENST00000481929 KIAA0556O60303 1618 aa26.27■■□□□ 1.8
HDAC6-224ENST00000481929 MAGI3Q5TCQ9 1506 aa26.22■■□□□ 1.79
HDAC6-224ENST00000481929 CD109Q6YHK3 1445 aa26.22■■□□□ 1.79
HDAC6-224ENST00000481929 RAPGEF2Q9Y4G8 1499 aa26.21■■□□□ 1.79
HDAC6-224ENST00000481929 CFAP43Q8NDM7 1665 aa26.19■■□□□ 1.78
HDAC6-224ENST00000481929 FBXO41Q8TF61 875 aa26.19■■□□□ 1.78
HDAC6-224ENST00000481929 KCNH8Q96L42 1107 aa26.14■■□□□ 1.78
HDAC6-224ENST00000481929 KIF21BO75037 1637 aa26.13■■□□□ 1.77
HDAC6-224ENST00000481929 GOLGA3Q08378 1498 aa26.06■■□□□ 1.76
HDAC6-224ENST00000481929 ABCA8O94911 1581 aa26.06■■□□□ 1.76
HDAC6-224ENST00000481929 ARAP3Q8WWN8 1544 aa26.03■■□□□ 1.76
HDAC6-224ENST00000481929 CTTNBP2Q8WZ74 1663 aa26.01■■□□□ 1.75
HDAC6-224ENST00000481929 PTPRMP28827 1452 aa25.99■■□□□ 1.75
HDAC6-224ENST00000481929 ADAMTSL3P82987 1691 aa25.96■■□□□ 1.75
HDAC6-224ENST00000481929 PHLDB1Q86UU1 1377 aa25.92■■□□□ 1.74
HDAC6-224ENST00000481929 FAM9AQ8IZU1 332 aaPredicted RBP25.88■■□□□ 1.73
HDAC6-224ENST00000481929 PCF11O94913 1555 aaKnown RBP25.87■■□□□ 1.73
HDAC6-224ENST00000481929 ARID3CA6NKF2 412 aa25.87■■□□□ 1.73
HDAC6-224ENST00000481929 ABCA9Q8IUA7 1624 aa25.85■■□□□ 1.73
HDAC6-224ENST00000481929 RAPGEF3O95398 923 aa25.85■■□□□ 1.73
HDAC6-224ENST00000481929 ATP10BO94823 1461 aa25.84■■□□□ 1.73
HDAC6-224ENST00000481929 BCORL1Q5H9F3 1711 aa25.83■■□□□ 1.73
HDAC6-224ENST00000481929 ARID4BQ4LE39 1312 aaPredicted RBP25.83■■□□□ 1.73
HDAC6-224ENST00000481929 MADDQ8WXG6 1647 aa25.82■■□□□ 1.72
HDAC6-224ENST00000481929 NEO1Q92859 1461 aa25.82■■□□□ 1.72
HDAC6-224ENST00000481929 LMTK3Q96Q04 1460 aa25.82■■□□□ 1.72
HDAC6-224ENST00000481929 PRXQ9BXM0 1461 aa25.76■■□□□ 1.71
HDAC6-224ENST00000481929 FRMPD1Q5SYB0 1578 aa25.76■■□□□ 1.71
HDAC6-224ENST00000481929 P3H3Q8IVL6 736 aa25.74■■□□□ 1.71
HDAC6-224ENST00000481929 RIMS1Q86UR5 1692 aaKnown RBP25.71■■□□□ 1.71
HDAC6-224ENST00000481929 ARHGEF40Q8TER5 1519 aa25.69■■□□□ 1.7
HDAC6-224ENST00000481929 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.68■■□□□ 1.7
HDAC6-224ENST00000481929 HNRNPUL2Q1KMD3 747 aaKnown RBP25.68■■□□□ 1.7
HDAC6-224ENST00000481929 HSPA2P54652 639 aa25.66■■□□□ 1.7
HDAC6-224ENST00000481929 RAPGEF6Q8TEU7 1601 aa25.66■■□□□ 1.7
HDAC6-224ENST00000481929 DENND4BO75064 1496 aaPredicted RBP25.64■■□□□ 1.69
HDAC6-224ENST00000481929 PLPPR3Q6T4P5 718 aa25.61■■□□□ 1.69
HDAC6-224ENST00000481929 POGZQ7Z3K3 1410 aa25.61■■□□□ 1.69
HDAC6-224ENST00000481929 SAMD9Q5K651 1589 aa25.61■■□□□ 1.69
HDAC6-224ENST00000481929 CERKQ8TCT0 537 aa25.6■■□□□ 1.69
HDAC6-224ENST00000481929 FANCAO15360 1455 aa25.6■■□□□ 1.69
HDAC6-224ENST00000481929 RICTORQ6R327 1708 aa25.59■■□□□ 1.69
HDAC6-224ENST00000481929 FHOD3Q2V2M9 1422 aa25.58■■□□□ 1.69
HDAC6-224ENST00000481929 AKNAQ7Z591 1439 aa25.58■■□□□ 1.69
HDAC6-224ENST00000481929 NUP153P49790 1475 aaKnown RBP25.56■■□□□ 1.68
HDAC6-224ENST00000481929 CFAP74Q9C0B2 1584 aa25.55■■□□□ 1.68
HDAC6-224ENST00000481929 ZMYM4Q5VZL5 1548 aa25.53■■□□□ 1.68
HDAC6-224ENST00000481929 ZFYVE16Q7Z3T8 1539 aa25.52■■□□□ 1.68
HDAC6-224ENST00000481929 PLEKHD1A6NEE1 506 aa25.51■■□□□ 1.67
HDAC6-224ENST00000481929 EFCAB5A4FU69 1503 aa25.51■■□□□ 1.67
HDAC6-224ENST00000481929 YEATS2Q9ULM3 1422 aa25.49■■□□□ 1.67
HDAC6-224ENST00000481929 MLECQ14165 292 aa25.47■■□□□ 1.67
HDAC6-224ENST00000481929 MAGI2Q86UL8 1455 aa25.47■■□□□ 1.67
HDAC6-224ENST00000481929 SIGLEC1Q9BZZ2 1709 aa25.46■■□□□ 1.67
HDAC6-224ENST00000481929 FER1L4A9Z1Z3 1794 aa25.46■■□□□ 1.67
HDAC6-224ENST00000481929 TTC37Q6PGP7 1564 aa25.45■■□□□ 1.66
HDAC6-224ENST00000481929 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.45■■□□□ 1.66
HDAC6-224ENST00000481929 DISP3Q9P2K9 1392 aa25.44■■□□□ 1.66
HDAC6-224ENST00000481929 HECW1Q76N89 1606 aa25.41■■□□□ 1.66
HDAC6-224ENST00000481929 RANGAP1P46060 587 aaPredicted RBP25.39■■□□□ 1.66
HDAC6-224ENST00000481929 ILDR2Q71H61 639 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms