RNA–Protein interactions for RNA: ENST00000481335.5

SQSTM1-207, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-207ENST00000481335 PRG4Q92954 1404 aaPredicted RBP21.07■□□□□ 0.96
SQSTM1-207ENST00000481335 JPH4Q96JJ6 628 aa21.06■□□□□ 0.96
SQSTM1-207ENST00000481335 KIAA0586Q9BVV6 1533 aa21.05■□□□□ 0.96
SQSTM1-207ENST00000481335 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
SQSTM1-207ENST00000481335 IQGAP2Q13576 1575 aa20.89■□□□□ 0.93
SQSTM1-207ENST00000481335 MAPKBP1O60336 1514 aa20.88■□□□□ 0.93
SQSTM1-207ENST00000481335 KIF13AQ9H1H9 1805 aa20.88■□□□□ 0.93
SQSTM1-207ENST00000481335 ADCY10Q96PN6 1610 aa20.86■□□□□ 0.93
SQSTM1-207ENST00000481335 RAPGEF2Q9Y4G8 1499 aa20.85■□□□□ 0.93
SQSTM1-207ENST00000481335 CARMIL2Q6F5E8 1435 aa20.85■□□□□ 0.93
SQSTM1-207ENST00000481335 NPM1P06748 294 aaKnown RBP eCLIP20.8■□□□□ 0.92
SQSTM1-207ENST00000481335 ABCC10Q5T3U5 1492 aa20.78■□□□□ 0.92
SQSTM1-207ENST00000481335 TNIKQ9UKE5 1360 aa20.78■□□□□ 0.92
SQSTM1-207ENST00000481335 UGGT2Q9NYU1 1516 aa20.77■□□□□ 0.92
SQSTM1-207ENST00000481335 PTPRGP23470 1445 aa20.77■□□□□ 0.91
SQSTM1-207ENST00000481335 DIP2BQ9P265 1576 aa20.76■□□□□ 0.91
SQSTM1-207ENST00000481335 CTTNBP2Q8WZ74 1663 aa20.75■□□□□ 0.91
SQSTM1-207ENST00000481335 DISP1Q96F81 1524 aa20.73■□□□□ 0.91
SQSTM1-207ENST00000481335 UHRF1BP1LA0JNW5 1464 aa20.71■□□□□ 0.91
SQSTM1-207ENST00000481335 ABCC2Q92887 1545 aa20.7■□□□□ 0.9
SQSTM1-207ENST00000481335 KIAA0556O60303 1618 aa20.69■□□□□ 0.9
SQSTM1-207ENST00000481335 PRXQ9BXM0 1461 aa20.68■□□□□ 0.9
SQSTM1-207ENST00000481335 UACAQ9BZF9 1416 aa20.65■□□□□ 0.9
SQSTM1-207ENST00000481335 FAM69CQ0P6D2 419 aa20.65■□□□□ 0.9
SQSTM1-207ENST00000481335 GOLGA3Q08378 1498 aa20.62■□□□□ 0.89
SQSTM1-207ENST00000481335 PLB1Q6P1J6 1458 aa20.62■□□□□ 0.89
SQSTM1-207ENST00000481335 KDM5BQ9UGL1 1544 aa20.59■□□□□ 0.89
SQSTM1-207ENST00000481335 GLI2P10070 1586 aa20.59■□□□□ 0.89
SQSTM1-207ENST00000481335 EEA1Q15075 1411 aa20.56■□□□□ 0.88
SQSTM1-207ENST00000481335 ASXL2Q76L83 1435 aa20.56■□□□□ 0.88
SQSTM1-207ENST00000481335 AEBP2Q6ZN18 517 aaPredicted RBP20.55■□□□□ 0.88
SQSTM1-207ENST00000481335 TSPOAP1O95153 1857 aa20.55■□□□□ 0.88
SQSTM1-207ENST00000481335 ZCCHC11Q5TAX3 1644 aaKnown RBP20.54■□□□□ 0.88
SQSTM1-207ENST00000481335 TTBK1Q5TCY1 1321 aaPredicted RBP20.53■□□□□ 0.88
SQSTM1-207ENST00000481335 KDM6BO15054 1643 aa20.53■□□□□ 0.88
SQSTM1-207ENST00000481335 ABCA8O94911 1581 aa20.49■□□□□ 0.87
SQSTM1-207ENST00000481335 PPRC1Q5VV67 1664 aaKnown RBP20.48■□□□□ 0.87
SQSTM1-207ENST00000481335 CSRNP3Q8WYN3 585 aa20.47■□□□□ 0.87
SQSTM1-207ENST00000481335 EPRSP07814 1512 aaKnown RBP20.47■□□□□ 0.87
SQSTM1-207ENST00000481335 MAP3K4Q9Y6R4 1608 aa20.46■□□□□ 0.87
SQSTM1-207ENST00000481335 WDR7Q9Y4E6 1490 aa20.43■□□□□ 0.86
SQSTM1-207ENST00000481335 SAMD9Q5K651 1589 aa20.43■□□□□ 0.86
SQSTM1-207ENST00000481335 TEX14Q8IWB6 1497 aa20.41■□□□□ 0.86
SQSTM1-207ENST00000481335 FAM9AQ8IZU1 332 aaPredicted RBP20.4■□□□□ 0.86
SQSTM1-207ENST00000481335 CFAP43Q8NDM7 1665 aa20.37■□□□□ 0.85
SQSTM1-207ENST00000481335 KIF21BO75037 1637 aa20.37■□□□□ 0.85
SQSTM1-207ENST00000481335 RAPGEF6Q8TEU7 1601 aa20.31■□□□□ 0.84
SQSTM1-207ENST00000481335 MAGI3Q5TCQ9 1506 aa20.3■□□□□ 0.84
SQSTM1-207ENST00000481335 EFCAB5A4FU69 1503 aa20.28■□□□□ 0.84
SQSTM1-207ENST00000481335 CD109Q6YHK3 1445 aa20.26■□□□□ 0.83
SQSTM1-207ENST00000481335 ATP10BO94823 1461 aa20.25■□□□□ 0.83
SQSTM1-207ENST00000481335 ABCA9Q8IUA7 1624 aa20.22■□□□□ 0.83
SQSTM1-207ENST00000481335 COL17A1Q9UMD9 1497 aaPredicted RBP20.22■□□□□ 0.83
SQSTM1-207ENST00000481335 P3H3Q8IVL6 736 aa20.21■□□□□ 0.83
SQSTM1-207ENST00000481335 NUP153P49790 1475 aaKnown RBP20.18■□□□□ 0.82
SQSTM1-207ENST00000481335 FHOD3Q2V2M9 1422 aa20.18■□□□□ 0.82
SQSTM1-207ENST00000481335 KCNH8Q96L42 1107 aa20.17■□□□□ 0.82
SQSTM1-207ENST00000481335 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
SQSTM1-207ENST00000481335 PHLDB1Q86UU1 1377 aa20.15■□□□□ 0.82
SQSTM1-207ENST00000481335 ARAP3Q8WWN8 1544 aa20.13■□□□□ 0.81
SQSTM1-207ENST00000481335 KDM4FA0A1W2PPD8 638 aa20.13■□□□□ 0.81
SQSTM1-207ENST00000481335 NEO1Q92859 1461 aa20.09■□□□□ 0.81
SQSTM1-207ENST00000481335 ADGRL1O94910 1474 aa20.08■□□□□ 0.81
SQSTM1-207ENST00000481335 ARID3CA6NKF2 412 aa20.07■□□□□ 0.8
SQSTM1-207ENST00000481335 FMN1Q68DA7 1419 aa20.07■□□□□ 0.8
SQSTM1-207ENST00000481335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.05■□□□□ 0.8
SQSTM1-207ENST00000481335 RANGAP1P46060 587 aaPredicted RBP20.05■□□□□ 0.8
SQSTM1-207ENST00000481335 HNRNPUL2Q1KMD3 747 aaKnown RBP20.05■□□□□ 0.8
SQSTM1-207ENST00000481335 UBTFP17480 764 aaKnown RBP20.04■□□□□ 0.8
SQSTM1-207ENST00000481335 HECW1Q76N89 1606 aa20.04■□□□□ 0.8
SQSTM1-207ENST00000481335 CFAP74Q9C0B2 1584 aa20.04■□□□□ 0.8
SQSTM1-207ENST00000481335 PLEKHD1A6NEE1 506 aa20.03■□□□□ 0.8
SQSTM1-207ENST00000481335 ARHGAP35Q9NRY4 1499 aa20.02■□□□□ 0.8
SQSTM1-207ENST00000481335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.98■□□□□ 0.796e-7■■■■□ 21.5
SQSTM1-207ENST00000481335 CDK13Q14004 1512 aaKnown RBP19.96■□□□□ 0.79
SQSTM1-207ENST00000481335 TTC37Q6PGP7 1564 aa19.95■□□□□ 0.78
SQSTM1-207ENST00000481335 FRMPD1Q5SYB0 1578 aa19.95■□□□□ 0.78
SQSTM1-207ENST00000481335 FANCAO15360 1455 aa19.93■□□□□ 0.78
SQSTM1-207ENST00000481335 RICTORQ6R327 1708 aa19.93■□□□□ 0.78
SQSTM1-207ENST00000481335 CDK11AQ9UQ88 783 aaPredicted RBP19.9■□□□□ 0.78
SQSTM1-207ENST00000481335 AKNAQ7Z591 1439 aa19.9■□□□□ 0.78
SQSTM1-207ENST00000481335 DENND4BO75064 1496 aaPredicted RBP19.9■□□□□ 0.78
SQSTM1-207ENST00000481335 MYO5CQ9NQX4 1742 aa19.89■□□□□ 0.77
SQSTM1-207ENST00000481335 ZMYM4Q5VZL5 1548 aa19.88■□□□□ 0.77
SQSTM1-207ENST00000481335 ARHGEF40Q8TER5 1519 aa19.88■□□□□ 0.77
SQSTM1-207ENST00000481335 KIF14Q15058 1648 aa19.87■□□□□ 0.77
SQSTM1-207ENST00000481335 PLCH2O75038 1416 aa19.86■□□□□ 0.77
SQSTM1-207ENST00000481335 LRRIQ1Q96JM4 1722 aa19.86■□□□□ 0.77
SQSTM1-207ENST00000481335 RAPGEF3O95398 923 aa19.86■□□□□ 0.77
SQSTM1-207ENST00000481335 EHMT2Q96KQ7 1210 aa19.86■□□□□ 0.77
SQSTM1-207ENST00000481335 CCDC18Q5T9S5 1454 aa19.86■□□□□ 0.77
SQSTM1-207ENST00000481335 CLIP1P30622 1438 aa19.85■□□□□ 0.77
SQSTM1-207ENST00000481335 TROQ12816 1431 aaPredicted RBP19.85■□□□□ 0.77
SQSTM1-207ENST00000481335 ADAMTSL3P82987 1691 aa19.84■□□□□ 0.77
SQSTM1-207ENST00000481335 CASKIN1Q8WXD9 1431 aa19.84■□□□□ 0.77
SQSTM1-207ENST00000481335 MAGI2Q86UL8 1455 aa19.83■□□□□ 0.76
SQSTM1-207ENST00000481335 PCF11O94913 1555 aaKnown RBP19.83■□□□□ 0.76
SQSTM1-207ENST00000481335 BCORL1Q5H9F3 1711 aa19.82■□□□□ 0.76
SQSTM1-207ENST00000481335 ATP1B4Q9UN42 357 aaPredicted RBP19.8■□□□□ 0.76
SQSTM1-207ENST00000481335 FYCO1Q9BQS8 1478 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms