RNA–Protein interactions for RNA: ENST00000480624.5

MACF1-217, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-217ENST00000480624 CLIP1P30622 1438 aa18.1■□□□□ 0.49
MACF1-217ENST00000480624 CTTNBP2Q8WZ74 1663 aa18.09■□□□□ 0.49
MACF1-217ENST00000480624 NUP160Q12769 1436 aa18.07■□□□□ 0.48
MACF1-217ENST00000480624 RANGAP1P46060 587 aaPredicted RBP18.07■□□□□ 0.48
MACF1-217ENST00000480624 CEP170Q5SW79 1584 aa18.06■□□□□ 0.48
MACF1-217ENST00000480624 KIAA0586Q9BVV6 1533 aa18.05■□□□□ 0.48
MACF1-217ENST00000480624 CHD1O14646 1710 aa18.03■□□□□ 0.48
MACF1-217ENST00000480624 ARHGAP35Q9NRY4 1499 aa18.01■□□□□ 0.47
MACF1-217ENST00000480624 IQGAP2Q13576 1575 aa18.01■□□□□ 0.47
MACF1-217ENST00000480624 ARAP1Q96P48 1450 aa17.97■□□□□ 0.47
MACF1-217ENST00000480624 EFCAB5A4FU69 1503 aa17.95■□□□□ 0.46
MACF1-217ENST00000480624 UGGT2Q9NYU1 1516 aa17.95■□□□□ 0.46
MACF1-217ENST00000480624 SAMD9Q5K651 1589 aa17.94■□□□□ 0.46
MACF1-217ENST00000480624 P3H3Q8IVL6 736 aa17.92■□□□□ 0.46
MACF1-217ENST00000480624 JPH4Q96JJ6 628 aa17.92■□□□□ 0.46
MACF1-217ENST00000480624 VPS8Q8N3P4 1428 aa17.89■□□□□ 0.46
MACF1-217ENST00000480624 CLASP1Q7Z460 1538 aa17.89■□□□□ 0.45
MACF1-217ENST00000480624 DISP1Q96F81 1524 aa17.89■□□□□ 0.45
MACF1-217ENST00000480624 FHOD3Q2V2M9 1422 aa17.89■□□□□ 0.45
MACF1-217ENST00000480624 SHROOM2Q13796 1616 aa17.84■□□□□ 0.45
MACF1-217ENST00000480624 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
MACF1-217ENST00000480624 KIAA0556O60303 1618 aa17.83■□□□□ 0.45
MACF1-217ENST00000480624 PRG4Q92954 1404 aaPredicted RBP17.81■□□□□ 0.44
MACF1-217ENST00000480624 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
MACF1-217ENST00000480624 FMN1Q68DA7 1419 aa17.79■□□□□ 0.44
MACF1-217ENST00000480624 ERCC6L2Q5T890 1561 aa17.74■□□□□ 0.43
MACF1-217ENST00000480624 CASKIN1Q8WXD9 1431 aa17.74■□□□□ 0.43
MACF1-217ENST00000480624 PCF11O94913 1555 aaKnown RBP17.73■□□□□ 0.43
MACF1-217ENST00000480624 FYCO1Q9BQS8 1478 aa17.71■□□□□ 0.43
MACF1-217ENST00000480624 TTBK1Q5TCY1 1321 aaPredicted RBP17.7■□□□□ 0.42
MACF1-217ENST00000480624 PTPRGP23470 1445 aa17.68■□□□□ 0.42
MACF1-217ENST00000480624 PPARGC1BQ86YN6 1023 aaKnown RBP17.68■□□□□ 0.42
MACF1-217ENST00000480624 APLP2Q06481 763 aa17.67■□□□□ 0.42
MACF1-217ENST00000480624 ATP1B4Q9UN42 357 aaPredicted RBP17.66■□□□□ 0.42
MACF1-217ENST00000480624 MAP3K1Q13233 1512 aa17.65■□□□□ 0.42
MACF1-217ENST00000480624 PLB1Q6P1J6 1458 aa17.64■□□□□ 0.41
MACF1-217ENST00000480624 ABCA8O94911 1581 aa17.62■□□□□ 0.41
MACF1-217ENST00000480624 TIAM1Q13009 1591 aa17.62■□□□□ 0.41
MACF1-217ENST00000480624 RAPGEF6Q8TEU7 1601 aa17.62■□□□□ 0.41
MACF1-217ENST00000480624 KANK4Q5T7N3 995 aaPredicted RBP17.62■□□□□ 0.41
MACF1-217ENST00000480624 HECW1Q76N89 1606 aa17.61■□□□□ 0.41
MACF1-217ENST00000480624 NUP153P49790 1475 aaKnown RBP17.61■□□□□ 0.41
MACF1-217ENST00000480624 LRRIQ1Q96JM4 1722 aa17.6■□□□□ 0.41
MACF1-217ENST00000480624 EPRSP07814 1512 aaKnown RBP17.58■□□□□ 0.41
MACF1-217ENST00000480624 CFAP43Q8NDM7 1665 aa17.58■□□□□ 0.4
MACF1-217ENST00000480624 UACAQ9BZF9 1416 aa17.57■□□□□ 0.4
MACF1-217ENST00000480624 CCDC18Q5T9S5 1454 aa17.56■□□□□ 0.4
MACF1-217ENST00000480624 CDK13Q14004 1512 aaKnown RBP17.55■□□□□ 0.4
MACF1-217ENST00000480624 LRRC9Q6ZRR7 1453 aa17.55■□□□□ 0.4
MACF1-217ENST00000480624 ARID3CA6NKF2 412 aa17.54■□□□□ 0.4
MACF1-217ENST00000480624 ARHGEF11O15085 1522 aa17.53■□□□□ 0.4
MACF1-217ENST00000480624 ABCC2Q92887 1545 aa17.52■□□□□ 0.39
MACF1-217ENST00000480624 UHRF1BP1LA0JNW5 1464 aa17.51■□□□□ 0.39
MACF1-217ENST00000480624 ATP10BO94823 1461 aa17.51■□□□□ 0.39
MACF1-217ENST00000480624 MAGI3Q5TCQ9 1506 aa17.5■□□□□ 0.39
MACF1-217ENST00000480624 MTUS2Q5JR59 1369 aa17.47■□□□□ 0.39
MACF1-217ENST00000480624 TRIM26Q12899 539 aaPredicted RBP17.46■□□□□ 0.39
MACF1-217ENST00000480624 RIMBP3CA6NJZ7 1639 aa17.46■□□□□ 0.39
MACF1-217ENST00000480624 RIMBP3BA6NNM3 1639 aa17.46■□□□□ 0.39
MACF1-217ENST00000480624 RIMBP3Q9UFD9 1639 aa17.46■□□□□ 0.39
MACF1-217ENST00000480624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
MACF1-217ENST00000480624 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
MACF1-217ENST00000480624 EHBP1L1Q8N3D4 1523 aa17.44■□□□□ 0.38
MACF1-217ENST00000480624 CDK11AQ9UQ88 783 aaPredicted RBP17.44■□□□□ 0.38
MACF1-217ENST00000480624 ADCY10Q96PN6 1610 aa17.43■□□□□ 0.38
MACF1-217ENST00000480624 KDM5BQ9UGL1 1544 aa17.43■□□□□ 0.38
MACF1-217ENST00000480624 TROQ12816 1431 aaPredicted RBP17.4■□□□□ 0.38
MACF1-217ENST00000480624 PLEKHD1A6NEE1 506 aa17.4■□□□□ 0.38
MACF1-217ENST00000480624 PHLDB1Q86UU1 1377 aa17.39■□□□□ 0.37
MACF1-217ENST00000480624 NCOA2Q15596 1464 aa17.38■□□□□ 0.37
MACF1-217ENST00000480624 ZCCHC11Q5TAX3 1644 aaKnown RBP17.38■□□□□ 0.37
MACF1-217ENST00000480624 CYB5RLQ6IPT4 315 aa17.37■□□□□ 0.37
MACF1-217ENST00000480624 SUPT6HQ7KZ85 1726 aaKnown RBP17.36■□□□□ 0.37
MACF1-217ENST00000480624 PCGF6Q9BYE7 350 aa17.36■□□□□ 0.37
MACF1-217ENST00000480624 RRBP1Q9P2E9 1410 aaKnown RBP17.33■□□□□ 0.36
MACF1-217ENST00000480624 KIF14Q15058 1648 aa17.31■□□□□ 0.36
MACF1-217ENST00000480624 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
MACF1-217ENST00000480624 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
MACF1-217ENST00000480624 ABCC10Q5T3U5 1492 aa17.29■□□□□ 0.36
MACF1-217ENST00000480624 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
MACF1-217ENST00000480624 FGD6Q6ZV73 1430 aa17.27■□□□□ 0.35
MACF1-217ENST00000480624 ASXL2Q76L83 1435 aa17.26■□□□□ 0.35
MACF1-217ENST00000480624 WDR7Q9Y4E6 1490 aa17.25■□□□□ 0.35
MACF1-217ENST00000480624 KCNH8Q96L42 1107 aa17.25■□□□□ 0.35
MACF1-217ENST00000480624 GPATCH8Q9UKJ3 1502 aaKnown RBP17.25■□□□□ 0.35
MACF1-217ENST00000480624 MIA2Q96PC5 1412 aa17.23■□□□□ 0.35
MACF1-217ENST00000480624 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.22■□□□□ 0.35
MACF1-217ENST00000480624 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.22■□□□□ 0.35
MACF1-217ENST00000480624 TCOF1Q13428 1488 aaKnown RBP17.2■□□□□ 0.34
MACF1-217ENST00000480624 TTC37Q6PGP7 1564 aa17.19■□□□□ 0.34
MACF1-217ENST00000480624 FAM50AQ14320 339 aaKnown RBP17.19■□□□□ 0.34
MACF1-217ENST00000480624 PTPN23Q9H3S7 1636 aa17.18■□□□□ 0.34
MACF1-217ENST00000480624 MAPKBP1O60336 1514 aa17.18■□□□□ 0.34
MACF1-217ENST00000480624 CDC42BPAQ5VT25 1732 aa17.17■□□□□ 0.34
MACF1-217ENST00000480624 CFDP1Q9UEE9 299 aaPredicted RBP17.17■□□□□ 0.34
MACF1-217ENST00000480624 ITSN2Q9NZM3 1697 aa17.16■□□□□ 0.34
MACF1-217ENST00000480624 ZNF644Q9H582 1327 aaPredicted RBP17.16■□□□□ 0.34
MACF1-217ENST00000480624 PREX2Q70Z35 1606 aa17.14■□□□□ 0.33
MACF1-217ENST00000480624 ABCA9Q8IUA7 1624 aa17.14■□□□□ 0.33
MACF1-217ENST00000480624 PLCH2O75038 1416 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms