RNA–Protein interactions for RNA: ENST00000480624.5

MACF1-217, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-217ENST00000480624 NISCHQ9Y2I1 1504 aa26.29■■□□□ 1.8
MACF1-217ENST00000480624 CCDC180Q9P1Z9 1646 aa23.03■■□□□ 1.28
MACF1-217ENST00000480624 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
MACF1-217ENST00000480624 ABCC9O60706 1549 aa22.01■■□□□ 1.11
MACF1-217ENST00000480624 DCAF1Q9Y4B6 1507 aa21.75■■□□□ 1.07
MACF1-217ENST00000480624 DCAF8L2P0C7V8 631 aa21.74■■□□□ 1.07
MACF1-217ENST00000480624 MYO15BQ96JP2 1530 aa21.6■■□□□ 1.05
MACF1-217ENST00000480624 NACADO15069 1562 aa21.53■■□□□ 1.04
MACF1-217ENST00000480624 RB1CC1Q8TDY2 1594 aa21.39■■□□□ 1.01
MACF1-217ENST00000480624 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
MACF1-217ENST00000480624 SCRIBQ14160 1630 aa21.11■□□□□ 0.97
MACF1-217ENST00000480624 UNC13AQ9UPW8 1703 aa20.91■□□□□ 0.94
MACF1-217ENST00000480624 BICRAQ9NZM4 1560 aa20.79■□□□□ 0.92
MACF1-217ENST00000480624 PABPN1Q86U42 306 aaKnown RBP eCLIP20.72■□□□□ 0.91
MACF1-217ENST00000480624 CECR2Q9BXF3 1484 aa20.46■□□□□ 0.87
MACF1-217ENST00000480624 MROH2BQ7Z745 1585 aa20.3■□□□□ 0.84
MACF1-217ENST00000480624 BAZ1AQ9NRL2 1556 aaPredicted RBP20.3■□□□□ 0.84
MACF1-217ENST00000480624 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
MACF1-217ENST00000480624 SUPT5HO00267 1087 aaKnown RBP20.28■□□□□ 0.84
MACF1-217ENST00000480624 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
MACF1-217ENST00000480624 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
MACF1-217ENST00000480624 EIF4G1Q04637 1599 aaKnown RBP20.15■□□□□ 0.82
MACF1-217ENST00000480624 WIZO95785 1651 aa20.09■□□□□ 0.81
MACF1-217ENST00000480624 PEG3Q9GZU2 1588 aa20.04■□□□□ 0.8
MACF1-217ENST00000480624 ATAD2BQ9ULI0 1458 aa20.01■□□□□ 0.79
MACF1-217ENST00000480624 SMARCA2P51531 1590 aa19.96■□□□□ 0.79
MACF1-217ENST00000480624 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
MACF1-217ENST00000480624 NCAPD3P42695 1498 aa19.9■□□□□ 0.78
MACF1-217ENST00000480624 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
MACF1-217ENST00000480624 BAZ1BQ9UIG0 1483 aaKnown RBP19.85■□□□□ 0.77
MACF1-217ENST00000480624 HMGXB3Q12766 1538 aa19.81■□□□□ 0.76
MACF1-217ENST00000480624 CCDC88BA6NC98 1476 aa19.71■□□□□ 0.75
MACF1-217ENST00000480624 CFTRP13569 1480 aa19.36■□□□□ 0.69
MACF1-217ENST00000480624 CADPSQ9ULU8 1353 aa19.35■□□□□ 0.69
MACF1-217ENST00000480624 CHIC1Q5VXU3 224 aa19.32■□□□□ 0.68
MACF1-217ENST00000480624 NESP48681 1621 aa19.25■□□□□ 0.67
MACF1-217ENST00000480624 LAMC3Q9Y6N6 1575 aa19.23■□□□□ 0.67
MACF1-217ENST00000480624 PRDM2Q13029 1718 aa19.17■□□□□ 0.66
MACF1-217ENST00000480624 ABCC8Q09428 1581 aa19.16■□□□□ 0.66
MACF1-217ENST00000480624 FANCD2Q9BXW9 1451 aa19.12■□□□□ 0.65
MACF1-217ENST00000480624 WRNQ14191 1432 aaPredicted RBP eCLIP19.09■□□□□ 0.65
MACF1-217ENST00000480624 TRIM41Q8WV44 630 aa19.09■□□□□ 0.65
MACF1-217ENST00000480624 PDS5BQ9NTI5 1447 aa19.08■□□□□ 0.65
MACF1-217ENST00000480624 SYNJ1O43426 1573 aa19.02■□□□□ 0.64
MACF1-217ENST00000480624 CEP164Q9UPV0 1460 aa19.01■□□□□ 0.63
MACF1-217ENST00000480624 CUX1P39880 1505 aa19■□□□□ 0.63
MACF1-217ENST00000480624 KIF21AQ7Z4S6 1674 aa18.98■□□□□ 0.63
MACF1-217ENST00000480624 DNAJC5Q9H3Z4 198 aa18.97■□□□□ 0.63
MACF1-217ENST00000480624 TOP2BQ02880 1626 aa18.96■□□□□ 0.63
MACF1-217ENST00000480624 BIVM-ERCC5R4GMW8 1640 aa18.95■□□□□ 0.62
MACF1-217ENST00000480624 URB2Q14146 1524 aaKnown RBP18.91■□□□□ 0.62
MACF1-217ENST00000480624 DNMBPQ6XZF7 1577 aa18.89■□□□□ 0.62
MACF1-217ENST00000480624 TOPBP1Q92547 1522 aa18.89■□□□□ 0.61
MACF1-217ENST00000480624 ERCC6Q03468 1493 aa18.87■□□□□ 0.61
MACF1-217ENST00000480624 MRC2Q9UBG0 1479 aa18.86■□□□□ 0.61
MACF1-217ENST00000480624 FGD5Q6ZNL6 1462 aa18.82■□□□□ 0.6
MACF1-217ENST00000480624 SOGA1O94964 1423 aa18.78■□□□□ 0.6
MACF1-217ENST00000480624 WDR62O43379 1518 aa18.78■□□□□ 0.6
MACF1-217ENST00000480624 POLA1P09884 1462 aaPredicted RBP18.77■□□□□ 0.6
MACF1-217ENST00000480624 THOC2Q8NI27 1593 aaKnown RBP18.77■□□□□ 0.6
MACF1-217ENST00000480624 RUSC2Q8N2Y8 1516 aa18.74■□□□□ 0.59
MACF1-217ENST00000480624 FAM9AQ8IZU1 332 aaPredicted RBP18.72■□□□□ 0.59
MACF1-217ENST00000480624 RAD54L2Q9Y4B4 1467 aa18.71■□□□□ 0.59
MACF1-217ENST00000480624 EEA1Q15075 1411 aa18.68■□□□□ 0.58
MACF1-217ENST00000480624 CUX2O14529 1486 aa18.68■□□□□ 0.58
MACF1-217ENST00000480624 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
MACF1-217ENST00000480624 TARBP1Q13395 1621 aaKnown RBP18.63■□□□□ 0.57
MACF1-217ENST00000480624 KIF27Q86VH2 1401 aa18.63■□□□□ 0.57
MACF1-217ENST00000480624 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
MACF1-217ENST00000480624 WDR97A6NE52 1622 aa18.6■□□□□ 0.57
MACF1-217ENST00000480624 IFT140Q96RY7 1462 aa18.59■□□□□ 0.57
MACF1-217ENST00000480624 TDRD9Q8NDG6 1382 aaKnown RBP18.56■□□□□ 0.56
MACF1-217ENST00000480624 LOC105371045A0A1W2PR82 267 aa18.55■□□□□ 0.56
MACF1-217ENST00000480624 IGF1RP08069 1367 aa18.54■□□□□ 0.56
MACF1-217ENST00000480624 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.55
MACF1-217ENST00000480624 ZNF608Q9ULD9 1512 aaPredicted RBP18.5■□□□□ 0.55
MACF1-217ENST00000480624 AQRO60306 1485 aaKnown RBP eCLIP18.49■□□□□ 0.55
MACF1-217ENST00000480624 GAPVD1Q14C86 1478 aa18.49■□□□□ 0.55
MACF1-217ENST00000480624 PRXQ9BXM0 1461 aa18.46■□□□□ 0.55
MACF1-217ENST00000480624 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
MACF1-217ENST00000480624 KIF21BO75037 1637 aa18.44■□□□□ 0.54
MACF1-217ENST00000480624 ERICH3Q5RHP9 1530 aa18.43■□□□□ 0.54
MACF1-217ENST00000480624 CARMIL1Q5VZK9 1371 aa18.41■□□□□ 0.54
MACF1-217ENST00000480624 GRIN2BQ13224 1484 aa18.4■□□□□ 0.54
MACF1-217ENST00000480624 EIF4G3O43432 1585 aaKnown RBP18.4■□□□□ 0.54
MACF1-217ENST00000480624 GOLGA3Q08378 1498 aa18.39■□□□□ 0.54
MACF1-217ENST00000480624 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.54
MACF1-217ENST00000480624 PBRM1Q86U86 1689 aa18.37■□□□□ 0.53
MACF1-217ENST00000480624 CUL7Q14999 1698 aa18.35■□□□□ 0.53
MACF1-217ENST00000480624 TNIKQ9UKE5 1360 aa18.31■□□□□ 0.52
MACF1-217ENST00000480624 UBTFP17480 764 aaKnown RBP18.31■□□□□ 0.52
MACF1-217ENST00000480624 FHAD1B1AJZ9 1412 aa18.31■□□□□ 0.52
MACF1-217ENST00000480624 SNAPC4Q5SXM2 1469 aa18.29■□□□□ 0.52
MACF1-217ENST00000480624 ADAMTS12P58397 1594 aa18.29■□□□□ 0.52
MACF1-217ENST00000480624 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
MACF1-217ENST00000480624 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
MACF1-217ENST00000480624 GRIN2AQ12879 1464 aa18.17■□□□□ 0.5
MACF1-217ENST00000480624 CEP162Q5TB80 1403 aa18.16■□□□□ 0.5
MACF1-217ENST00000480624 CHMP7Q8WUX9 453 aaPredicted RBP18.16■□□□□ 0.5
MACF1-217ENST00000480624 FBLN2P98095 1184 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms