RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 EFCAB5A4FU69 1503 aa25.49■■□□□ 1.67
SH3D21-203ENST00000480549 KANK4Q5T7N3 995 aaPredicted RBP25.47■■□□□ 1.67
SH3D21-203ENST00000480549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.45■■□□□ 1.66
SH3D21-203ENST00000480549 IFT140Q96RY7 1462 aa25.44■■□□□ 1.66
SH3D21-203ENST00000480549 THOC2Q8NI27 1593 aaKnown RBP25.43■■□□□ 1.66
SH3D21-203ENST00000480549 AQRO60306 1485 aaKnown RBP eCLIP25.43■■□□□ 1.664e-11■■■■■ 34.5
SH3D21-203ENST00000480549 MAP3K1Q13233 1512 aa25.43■■□□□ 1.66
SH3D21-203ENST00000480549 TIAM1Q13009 1591 aa25.41■■□□□ 1.66
SH3D21-203ENST00000480549 ADAMTS12P58397 1594 aa25.41■■□□□ 1.66
SH3D21-203ENST00000480549 PCF11O94913 1555 aaKnown RBP25.4■■□□□ 1.66
SH3D21-203ENST00000480549 FHAD1B1AJZ9 1412 aa25.4■■□□□ 1.66
SH3D21-203ENST00000480549 ERCC6Q03468 1493 aa25.4■■□□□ 1.66
SH3D21-203ENST00000480549 FHOD3Q2V2M9 1422 aa25.38■■□□□ 1.65
SH3D21-203ENST00000480549 SAMD9Q5K651 1589 aa25.38■■□□□ 1.65
SH3D21-203ENST00000480549 ZNF608Q9ULD9 1512 aaPredicted RBP25.37■■□□□ 1.65
SH3D21-203ENST00000480549 GRIN2BQ13224 1484 aa25.36■■□□□ 1.65
SH3D21-203ENST00000480549 CFAP43Q8NDM7 1665 aa25.36■■□□□ 1.65
SH3D21-203ENST00000480549 CCER1Q8TC90 406 aaPredicted RBP25.35■■□□□ 1.65
SH3D21-203ENST00000480549 P3H3Q8IVL6 736 aa25.34■■□□□ 1.65
SH3D21-203ENST00000480549 RRBP1Q9P2E9 1410 aaKnown RBP25.3■■□□□ 1.64
SH3D21-203ENST00000480549 FYCO1Q9BQS8 1478 aa25.29■■□□□ 1.64
SH3D21-203ENST00000480549 EIF4G3O43432 1585 aaKnown RBP25.29■■□□□ 1.64
SH3D21-203ENST00000480549 HNRNPUL2Q1KMD3 747 aaKnown RBP25.29■■□□□ 1.64
SH3D21-203ENST00000480549 CASKIN1Q8WXD9 1431 aa25.27■■□□□ 1.64
SH3D21-203ENST00000480549 LRRC9Q6ZRR7 1453 aa25.27■■□□□ 1.64
SH3D21-203ENST00000480549 ACIN1Q9UKV3 1341 aaKnown RBP25.26■■□□□ 1.63
SH3D21-203ENST00000480549 SNAPC4Q5SXM2 1469 aa25.24■■□□□ 1.63
SH3D21-203ENST00000480549 FMN1Q68DA7 1419 aa25.23■■□□□ 1.63
SH3D21-203ENST00000480549 NEUROD1Q13562 356 aa25.21■■□□□ 1.63
SH3D21-203ENST00000480549 IQGAP2Q13576 1575 aa25.21■■□□□ 1.63
SH3D21-203ENST00000480549 GTF3C3Q9Y5Q9 886 aa25.19■■□□□ 1.62
SH3D21-203ENST00000480549 LRRIQ1Q96JM4 1722 aa25.17■■□□□ 1.62
SH3D21-203ENST00000480549 CCNB3Q8WWL7 1395 aa25.15■■□□□ 1.62
SH3D21-203ENST00000480549 GRIN2AQ12879 1464 aa25.1■■□□□ 1.61
SH3D21-203ENST00000480549 ATP1B4Q9UN42 357 aaPredicted RBP25.09■■□□□ 1.61
SH3D21-203ENST00000480549 MAGI1Q96QZ7 1491 aaPredicted RBP25.09■■□□□ 1.61
SH3D21-203ENST00000480549 UGGT2Q9NYU1 1516 aa25.09■■□□□ 1.61
SH3D21-203ENST00000480549 PHLDB1Q86UU1 1377 aa25.09■■□□□ 1.61
SH3D21-203ENST00000480549 KIAA0586Q9BVV6 1533 aa25.05■■□□□ 1.6
SH3D21-203ENST00000480549 SYNJ2O15056 1496 aa25.01■■□□□ 1.59
SH3D21-203ENST00000480549 CEP170Q5SW79 1584 aa24.97■■□□□ 1.59
SH3D21-203ENST00000480549 KIAA0556O60303 1618 aa24.97■■□□□ 1.59
SH3D21-203ENST00000480549 HECW1Q76N89 1606 aa24.96■■□□□ 1.59
SH3D21-203ENST00000480549 DISP1Q96F81 1524 aa24.96■■□□□ 1.59
SH3D21-203ENST00000480549 CCDC18Q5T9S5 1454 aa24.93■■□□□ 1.58
SH3D21-203ENST00000480549 EHBP1L1Q8N3D4 1523 aa24.91■■□□□ 1.58
SH3D21-203ENST00000480549 MTUS2Q5JR59 1369 aa24.91■■□□□ 1.58
SH3D21-203ENST00000480549 MAGI3Q5TCQ9 1506 aa24.9■■□□□ 1.58
SH3D21-203ENST00000480549 DHX57Q6P158 1386 aaKnown RBP24.89■■□□□ 1.58
SH3D21-203ENST00000480549 SUPT6HQ7KZ85 1726 aaKnown RBP24.89■■□□□ 1.57
SH3D21-203ENST00000480549 CHMP7Q8WUX9 453 aaPredicted RBP24.89■■□□□ 1.57
SH3D21-203ENST00000480549 NUP160Q12769 1436 aa24.88■■□□□ 1.57
SH3D21-203ENST00000480549 EPRSP07814 1512 aaKnown RBP24.87■■□□□ 1.57
SH3D21-203ENST00000480549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.87■■□□□ 1.571e-8■■■■□ 21.3
SH3D21-203ENST00000480549 ITGAEP38570 1179 aa24.87■■□□□ 1.57
SH3D21-203ENST00000480549 NCOA2Q15596 1464 aa24.85■■□□□ 1.57
SH3D21-203ENST00000480549 FGD6Q6ZV73 1430 aa24.85■■□□□ 1.57
SH3D21-203ENST00000480549 ARHGEF11O15085 1522 aa24.84■■□□□ 1.57
SH3D21-203ENST00000480549 CENPBP07199 599 aaPredicted RBP24.83■■□□□ 1.57
SH3D21-203ENST00000480549 FAM50AQ14320 339 aaKnown RBP24.82■■□□□ 1.56
SH3D21-203ENST00000480549 BCL11AQ9H165 835 aa24.81■■□□□ 1.56
SH3D21-203ENST00000480549 CDK13Q14004 1512 aaKnown RBP24.81■■□□□ 1.56
SH3D21-203ENST00000480549 CLSPNQ9HAW4 1339 aa24.8■■□□□ 1.56
SH3D21-203ENST00000480549 FBLN2P98095 1184 aa24.79■■□□□ 1.56
SH3D21-203ENST00000480549 RAPGEF6Q8TEU7 1601 aa24.78■■□□□ 1.56
SH3D21-203ENST00000480549 MYOM3Q5VTT5 1437 aa24.78■■□□□ 1.56
SH3D21-203ENST00000480549 RAB3GAP2Q9H2M9 1393 aa24.78■■□□□ 1.56
SH3D21-203ENST00000480549 SETD5Q9C0A6 1442 aa24.75■■□□□ 1.55
SH3D21-203ENST00000480549 NUP153P49790 1475 aaKnown RBP24.74■■□□□ 1.55
SH3D21-203ENST00000480549 PTPN23Q9H3S7 1636 aa24.7■■□□□ 1.54
SH3D21-203ENST00000480549 CHD1O14646 1710 aa24.68■■□□□ 1.54
SH3D21-203ENST00000480549 JPH4Q96JJ6 628 aa24.68■■□□□ 1.54
SH3D21-203ENST00000480549 CARMIL2Q6F5E8 1435 aa24.67■■□□□ 1.54
SH3D21-203ENST00000480549 PTPRKQ15262 1439 aa24.64■■□□□ 1.54
SH3D21-203ENST00000480549 TCOF1Q13428 1488 aaKnown RBP24.64■■□□□ 1.54
SH3D21-203ENST00000480549 MAPKBP1O60336 1514 aa24.64■■□□□ 1.53
SH3D21-203ENST00000480549 ARID3CA6NKF2 412 aa24.64■■□□□ 1.53
SH3D21-203ENST00000480549 PLB1Q6P1J6 1458 aa24.63■■□□□ 1.53
SH3D21-203ENST00000480549 MIA2Q96PC5 1412 aa24.57■■□□□ 1.52
SH3D21-203ENST00000480549 ABCA8O94911 1581 aa24.57■■□□□ 1.52
SH3D21-203ENST00000480549 HFM1A2PYH4 1435 aa24.55■■□□□ 1.52
SH3D21-203ENST00000480549 ZNF316A6NFI3 1004 aaPredicted RBP24.54■■□□□ 1.52
SH3D21-203ENST00000480549 SHROOM2Q13796 1616 aa24.52■■□□□ 1.52
SH3D21-203ENST00000480549 ADCY10Q96PN6 1610 aa24.51■■□□□ 1.51
SH3D21-203ENST00000480549 TROQ12816 1431 aaPredicted RBP24.5■■□□□ 1.51
SH3D21-203ENST00000480549 PRG4Q92954 1404 aaPredicted RBP24.5■■□□□ 1.51
SH3D21-203ENST00000480549 NAIPQ13075 1403 aa24.49■■□□□ 1.51
SH3D21-203ENST00000480549 CDK11AQ9UQ88 783 aaPredicted RBP24.48■■□□□ 1.51
SH3D21-203ENST00000480549 GCC2Q8IWJ2 1684 aa24.47■■□□□ 1.51
SH3D21-203ENST00000480549 KIF14Q15058 1648 aa24.46■■□□□ 1.51
SH3D21-203ENST00000480549 DIEXFQ68CQ4 756 aaKnown RBP24.45■■□□□ 1.5
SH3D21-203ENST00000480549 ITSN2Q9NZM3 1697 aa24.42■■□□□ 1.5
SH3D21-203ENST00000480549 AKNAQ7Z591 1439 aa24.42■■□□□ 1.5
SH3D21-203ENST00000480549 ATP10BO94823 1461 aa24.41■■□□□ 1.5
SH3D21-203ENST00000480549 PRKCSHP14314 528 aaPredicted RBP24.4■■□□□ 1.5
SH3D21-203ENST00000480549 DNMT1P26358 1616 aaKnown RBP24.4■■□□□ 1.5
SH3D21-203ENST00000480549 UACAQ9BZF9 1416 aa24.39■■□□□ 1.5
SH3D21-203ENST00000480549 PTPRGP23470 1445 aa24.38■■□□□ 1.49
SH3D21-203ENST00000480549 GPATCH8Q9UKJ3 1502 aaKnown RBP24.36■■□□□ 1.49
SH3D21-203ENST00000480549 DAPK1P53355 1430 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms