RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 ADCY10Q96PN6 1610 aa15.72■□□□□ 0.11
VCP-206ENST00000480327 CUL7Q14999 1698 aa15.69■□□□□ 0.1
VCP-206ENST00000480327 IGF1RP08069 1367 aa15.67■□□□□ 0.1
VCP-206ENST00000480327 MAPKBP1O60336 1514 aa15.67■□□□□ 0.1
VCP-206ENST00000480327 DIP2BQ9P265 1576 aa15.66■□□□□ 0.1
VCP-206ENST00000480327 KIAA0586Q9BVV6 1533 aa15.65■□□□□ 0.1
VCP-206ENST00000480327 ABCC10Q5T3U5 1492 aa15.65■□□□□ 0.1
VCP-206ENST00000480327 AEBP2Q6ZN18 517 aaPredicted RBP15.63■□□□□ 0.09
VCP-206ENST00000480327 KIF27Q86VH2 1401 aa15.61■□□□□ 0.09
VCP-206ENST00000480327 TSPOAP1O95153 1857 aa15.59■□□□□ 0.09
VCP-206ENST00000480327 FAM69CQ0P6D2 419 aa15.56■□□□□ 0.08
VCP-206ENST00000480327 CARMIL1Q5VZK9 1371 aa15.52■□□□□ 0.08
VCP-206ENST00000480327 PPRC1Q5VV67 1664 aaKnown RBP15.52■□□□□ 0.08
VCP-206ENST00000480327 IQGAP2Q13576 1575 aa15.52■□□□□ 0.07
VCP-206ENST00000480327 KDM6BO15054 1643 aa15.51■□□□□ 0.07
VCP-206ENST00000480327 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
VCP-206ENST00000480327 PTPRGP23470 1445 aa15.49■□□□□ 0.07
VCP-206ENST00000480327 DISP1Q96F81 1524 aa15.48■□□□□ 0.07
VCP-206ENST00000480327 ABCC2Q92887 1545 aa15.47■□□□□ 0.07
VCP-206ENST00000480327 TNIKQ9UKE5 1360 aa15.46■□□□□ 0.07
VCP-206ENST00000480327 UHRF1BP1LA0JNW5 1464 aa15.44■□□□□ 0.06
VCP-206ENST00000480327 GLI2P10070 1586 aa15.44■□□□□ 0.06
VCP-206ENST00000480327 CARMIL2Q6F5E8 1435 aa15.43■□□□□ 0.06
VCP-206ENST00000480327 ASXL2Q76L83 1435 aa15.43■□□□□ 0.06
VCP-206ENST00000480327 TTBK1Q5TCY1 1321 aaPredicted RBP15.43■□□□□ 0.06
VCP-206ENST00000480327 UGGT2Q9NYU1 1516 aa15.42■□□□□ 0.06
VCP-206ENST00000480327 KIAA0556O60303 1618 aa15.4■□□□□ 0.06
VCP-206ENST00000480327 ZCCHC11Q5TAX3 1644 aaKnown RBP15.4■□□□□ 0.06
VCP-206ENST00000480327 KDM4FA0A1W2PPD8 638 aa15.4■□□□□ 0.06
VCP-206ENST00000480327 RAPGEF2Q9Y4G8 1499 aa15.4■□□□□ 0.06
VCP-206ENST00000480327 MAP3K4Q9Y6R4 1608 aa15.39■□□□□ 0.05
VCP-206ENST00000480327 CTTNBP2Q8WZ74 1663 aa15.39■□□□□ 0.05
VCP-206ENST00000480327 UACAQ9BZF9 1416 aa15.39■□□□□ 0.05
VCP-206ENST00000480327 KDM5BQ9UGL1 1544 aa15.38■□□□□ 0.05
VCP-206ENST00000480327 PLB1Q6P1J6 1458 aa15.38■□□□□ 0.05
VCP-206ENST00000480327 COL17A1Q9UMD9 1497 aaPredicted RBP15.35■□□□□ 0.05
VCP-206ENST00000480327 EPRSP07814 1512 aaKnown RBP15.35■□□□□ 0.05
VCP-206ENST00000480327 ABCA8O94911 1581 aa15.28■□□□□ 0.04
VCP-206ENST00000480327 CHIC1Q5VXU3 224 aa15.27■□□□□ 0.04
VCP-206ENST00000480327 ADGRL1O94910 1474 aa15.26■□□□□ 0.03
VCP-206ENST00000480327 PRXQ9BXM0 1461 aa15.25■□□□□ 0.03
VCP-206ENST00000480327 WDR7Q9Y4E6 1490 aa15.25■□□□□ 0.03
VCP-206ENST00000480327 CFAP43Q8NDM7 1665 aa15.24■□□□□ 0.03
VCP-206ENST00000480327 TEX14Q8IWB6 1497 aa15.22■□□□□ 0.03
VCP-206ENST00000480327 GOLGA3Q08378 1498 aa15.2■□□□□ 0.02
VCP-206ENST00000480327 MAGI3Q5TCQ9 1506 aa15.17■□□□□ 0.02
VCP-206ENST00000480327 SAMD9Q5K651 1589 aa15.15■□□□□ 0.02
VCP-206ENST00000480327 CD109Q6YHK3 1445 aa15.14■□□□□ 0.01
VCP-206ENST00000480327 KIF21BO75037 1637 aa15.13■□□□□ 0.01
VCP-206ENST00000480327 HECW2Q9P2P5 1572 aa15.11■□□□□ 0.01
VCP-206ENST00000480327 KCNH8Q96L42 1107 aa15.11■□□□□ 0.01
VCP-206ENST00000480327 ATP10BO94823 1461 aa15.11■□□□□ 0.01
VCP-206ENST00000480327 ABCA9Q8IUA7 1624 aa15.1■□□□□ 0.01
VCP-206ENST00000480327 FAM9AQ8IZU1 332 aaPredicted RBP15.09■□□□□ 0.01
VCP-206ENST00000480327 RAPGEF6Q8TEU7 1601 aa15.08■□□□□ 0
VCP-206ENST00000480327 P3H3Q8IVL6 736 aa15.07■□□□□ 0
VCP-206ENST00000480327 ARAP3Q8WWN8 1544 aa15.07■□□□□ 0
VCP-206ENST00000480327 ARID3CA6NKF2 412 aa15.06■□□□□ 0
VCP-206ENST00000480327 FRMPD1Q5SYB0 1578 aa15.03■□□□□ -0
VCP-206ENST00000480327 NUP153P49790 1475 aaKnown RBP15.01□□□□□ -0.01
VCP-206ENST00000480327 ADAMTSL3P82987 1691 aa15.01□□□□□ -0.01
VCP-206ENST00000480327 ILDR1Q86SU0 546 aaPredicted RBP15.01□□□□□ -0.01
VCP-206ENST00000480327 CSRNP3Q8WYN3 585 aa15.01□□□□□ -0.01
VCP-206ENST00000480327 EEA1Q15075 1411 aa14.97□□□□□ -0.01
VCP-206ENST00000480327 FHOD3Q2V2M9 1422 aa14.97□□□□□ -0.01
VCP-206ENST00000480327 RICTORQ6R327 1708 aa14.96□□□□□ -0.01
VCP-206ENST00000480327 NEO1Q92859 1461 aa14.95□□□□□ -0.02
VCP-206ENST00000480327 BCORL1Q5H9F3 1711 aa14.95□□□□□ -0.02
VCP-206ENST00000480327 RAPGEF3O95398 923 aa14.94□□□□□ -0.02
VCP-206ENST00000480327 EHMT2Q96KQ7 1210 aa14.94□□□□□ -0.02
VCP-206ENST00000480327 SIGLEC1Q9BZZ2 1709 aa14.94□□□□□ -0.02
VCP-206ENST00000480327 PHLDB1Q86UU1 1377 aa14.93□□□□□ -0.02
VCP-206ENST00000480327 TTC37Q6PGP7 1564 aa14.92□□□□□ -0.02
VCP-206ENST00000480327 MADDQ8WXG6 1647 aa14.92□□□□□ -0.02
VCP-206ENST00000480327 PTPRMP28827 1452 aa14.91□□□□□ -0.02
VCP-206ENST00000480327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.91□□□□□ -0.02
VCP-206ENST00000480327 ARHGEF40Q8TER5 1519 aa14.9□□□□□ -0.02
VCP-206ENST00000480327 EFCAB5A4FU69 1503 aa14.89□□□□□ -0.03
VCP-206ENST00000480327 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
VCP-206ENST00000480327 CDK13Q14004 1512 aaKnown RBP14.87□□□□□ -0.03
VCP-206ENST00000480327 RIMS1Q86UR5 1692 aaKnown RBP14.87□□□□□ -0.03
VCP-206ENST00000480327 CFAP74Q9C0B2 1584 aa14.86□□□□□ -0.03
VCP-206ENST00000480327 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.86□□□□□ -0.03
VCP-206ENST00000480327 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
VCP-206ENST00000480327 LRRIQ1Q96JM4 1722 aa14.85□□□□□ -0.03
VCP-206ENST00000480327 AKNAQ7Z591 1439 aa14.84□□□□□ -0.03
VCP-206ENST00000480327 ZMYM4Q5VZL5 1548 aa14.84□□□□□ -0.03
VCP-206ENST00000480327 FANCAO15360 1455 aa14.83□□□□□ -0.03
VCP-206ENST00000480327 DENND4BO75064 1496 aaPredicted RBP14.83□□□□□ -0.03
VCP-206ENST00000480327 PLEKHD1A6NEE1 506 aa14.81□□□□□ -0.04
VCP-206ENST00000480327 LMTK3Q96Q04 1460 aa14.81□□□□□ -0.04
VCP-206ENST00000480327 PCF11O94913 1555 aaKnown RBP14.81□□□□□ -0.04
VCP-206ENST00000480327 HECW1Q76N89 1606 aa14.81□□□□□ -0.04
VCP-206ENST00000480327 YEATS2Q9ULM3 1422 aa14.8□□□□□ -0.04
VCP-206ENST00000480327 KIF14Q15058 1648 aa14.79□□□□□ -0.04
VCP-206ENST00000480327 MYO5CQ9NQX4 1742 aa14.79□□□□□ -0.04
VCP-206ENST00000480327 ZFYVE16Q7Z3T8 1539 aa14.78□□□□□ -0.04
VCP-206ENST00000480327 ARHGAP35Q9NRY4 1499 aa14.78□□□□□ -0.04
VCP-206ENST00000480327 UBTFP17480 764 aaKnown RBP14.78□□□□□ -0.04
VCP-206ENST00000480327 FER1L4A9Z1Z3 1794 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms