RNA–Protein interactions for RNA: ENST00000479960.1

ATP1A1-207, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 611 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-207ENST00000479960 SYNJ2O15056 1496 aa19.53■□□□□ 0.72
ATP1A1-207ENST00000479960 CLIP1P30622 1438 aa19.51■□□□□ 0.71
ATP1A1-207ENST00000479960 GRIN2AQ12879 1464 aa19.48■□□□□ 0.71
ATP1A1-207ENST00000479960 CHD1O14646 1710 aa19.39■□□□□ 0.7
ATP1A1-207ENST00000479960 IQGAP2Q13576 1575 aa19.39■□□□□ 0.69
ATP1A1-207ENST00000479960 KIAA0586Q9BVV6 1533 aa19.37■□□□□ 0.69
ATP1A1-207ENST00000479960 EFCAB5A4FU69 1503 aa19.35■□□□□ 0.69
ATP1A1-207ENST00000479960 CEP170Q5SW79 1584 aa19.32■□□□□ 0.68
ATP1A1-207ENST00000479960 ARHGAP35Q9NRY4 1499 aa19.32■□□□□ 0.68
ATP1A1-207ENST00000479960 NUP160Q12769 1436 aa19.32■□□□□ 0.68
ATP1A1-207ENST00000479960 APLP2Q06481 763 aa19.3■□□□□ 0.68
ATP1A1-207ENST00000479960 P3H3Q8IVL6 736 aa19.3■□□□□ 0.68
ATP1A1-207ENST00000479960 VPS8Q8N3P4 1428 aa19.29■□□□□ 0.68
ATP1A1-207ENST00000479960 ARAP1Q96P48 1450 aa19.27■□□□□ 0.67
ATP1A1-207ENST00000479960 UGGT2Q9NYU1 1516 aa19.25■□□□□ 0.67
ATP1A1-207ENST00000479960 SAMD9Q5K651 1589 aa19.25■□□□□ 0.67
ATP1A1-207ENST00000479960 JPH4Q96JJ6 628 aa19.25■□□□□ 0.67
ATP1A1-207ENST00000479960 CARMIL2Q6F5E8 1435 aa19.23■□□□□ 0.67
ATP1A1-207ENST00000479960 FHOD3Q2V2M9 1422 aa19.21■□□□□ 0.67
ATP1A1-207ENST00000479960 FMN1Q68DA7 1419 aa19.2■□□□□ 0.66
ATP1A1-207ENST00000479960 OSCARQ8IYS5 282 aa19.17■□□□□ 0.66
ATP1A1-207ENST00000479960 ATP1B4Q9UN42 357 aaPredicted RBP19.17■□□□□ 0.66
ATP1A1-207ENST00000479960 KIAA0556O60303 1618 aa19.16■□□□□ 0.66
ATP1A1-207ENST00000479960 DISP1Q96F81 1524 aa19.13■□□□□ 0.65
ATP1A1-207ENST00000479960 PRG4Q92954 1404 aaPredicted RBP19.12■□□□□ 0.65
ATP1A1-207ENST00000479960 TTBK1Q5TCY1 1321 aaPredicted RBP19.11■□□□□ 0.65
ATP1A1-207ENST00000479960 CLASP1Q7Z460 1538 aa19.1■□□□□ 0.65
ATP1A1-207ENST00000479960 SHROOM2Q13796 1616 aa19.1■□□□□ 0.65
ATP1A1-207ENST00000479960 FYCO1Q9BQS8 1478 aa19.09■□□□□ 0.65
ATP1A1-207ENST00000479960 CASKIN1Q8WXD9 1431 aa19.08■□□□□ 0.65
ATP1A1-207ENST00000479960 PPARGC1BQ86YN6 1023 aaKnown RBP19.07■□□□□ 0.64
ATP1A1-207ENST00000479960 PCF11O94913 1555 aaKnown RBP19.06■□□□□ 0.64
ATP1A1-207ENST00000479960 HECW1Q76N89 1606 aa19.02■□□□□ 0.64
ATP1A1-207ENST00000479960 PTPRGP23470 1445 aa19.01■□□□□ 0.63
ATP1A1-207ENST00000479960 MAP3K1Q13233 1512 aa19.01■□□□□ 0.63
ATP1A1-207ENST00000479960 RAPGEF6Q8TEU7 1601 aa18.99■□□□□ 0.63
ATP1A1-207ENST00000479960 TIAM1Q13009 1591 aa18.98■□□□□ 0.63
ATP1A1-207ENST00000479960 TRIM26Q12899 539 aaPredicted RBP18.98■□□□□ 0.63
ATP1A1-207ENST00000479960 CCDC18Q5T9S5 1454 aa18.97■□□□□ 0.63
ATP1A1-207ENST00000479960 CFAP43Q8NDM7 1665 aa18.95■□□□□ 0.62
ATP1A1-207ENST00000479960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.94■□□□□ 0.62
ATP1A1-207ENST00000479960 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
ATP1A1-207ENST00000479960 CDK11AQ9UQ88 783 aaPredicted RBP18.92■□□□□ 0.62
ATP1A1-207ENST00000479960 ERCC6L2Q5T890 1561 aa18.91■□□□□ 0.62
ATP1A1-207ENST00000479960 PLB1Q6P1J6 1458 aa18.9■□□□□ 0.62
ATP1A1-207ENST00000479960 KANK4Q5T7N3 995 aaPredicted RBP18.9■□□□□ 0.62
ATP1A1-207ENST00000479960 EPRSP07814 1512 aaKnown RBP18.9■□□□□ 0.62
ATP1A1-207ENST00000479960 LRRIQ1Q96JM4 1722 aa18.89■□□□□ 0.61
ATP1A1-207ENST00000479960 MTUS2Q5JR59 1369 aa18.89■□□□□ 0.61
ATP1A1-207ENST00000479960 LRRC9Q6ZRR7 1453 aa18.89■□□□□ 0.61
ATP1A1-207ENST00000479960 ABCA8O94911 1581 aa18.89■□□□□ 0.61
ATP1A1-207ENST00000479960 UACAQ9BZF9 1416 aa18.88■□□□□ 0.61
ATP1A1-207ENST00000479960 ARID3CA6NKF2 412 aa18.87■□□□□ 0.61
ATP1A1-207ENST00000479960 PCGF6Q9BYE7 350 aa18.86■□□□□ 0.61
ATP1A1-207ENST00000479960 NUP153P49790 1475 aaKnown RBP18.85■□□□□ 0.61
ATP1A1-207ENST00000479960 CDK13Q14004 1512 aaKnown RBP18.83■□□□□ 0.6
ATP1A1-207ENST00000479960 EHBP1L1Q8N3D4 1523 aa18.81■□□□□ 0.6
ATP1A1-207ENST00000479960 ABCC2Q92887 1545 aa18.8■□□□□ 0.6
ATP1A1-207ENST00000479960 PLEKHD1A6NEE1 506 aa18.8■□□□□ 0.6
ATP1A1-207ENST00000479960 SUPT6HQ7KZ85 1726 aaKnown RBP18.8■□□□□ 0.6
ATP1A1-207ENST00000479960 UHRF1BP1LA0JNW5 1464 aa18.77■□□□□ 0.6
ATP1A1-207ENST00000479960 ATP10BO94823 1461 aa18.77■□□□□ 0.59
ATP1A1-207ENST00000479960 NPM1P06748 294 aaKnown RBP eCLIP18.75■□□□□ 0.59
ATP1A1-207ENST00000479960 ARHGEF11O15085 1522 aa18.74■□□□□ 0.59
ATP1A1-207ENST00000479960 TROQ12816 1431 aaPredicted RBP18.72■□□□□ 0.59
ATP1A1-207ENST00000479960 NCOA2Q15596 1464 aa18.7■□□□□ 0.58
ATP1A1-207ENST00000479960 MAGI3Q5TCQ9 1506 aa18.69■□□□□ 0.58
ATP1A1-207ENST00000479960 RIMBP3CA6NJZ7 1639 aa18.69■□□□□ 0.58
ATP1A1-207ENST00000479960 RIMBP3BA6NNM3 1639 aa18.69■□□□□ 0.58
ATP1A1-207ENST00000479960 ZCCHC11Q5TAX3 1644 aaKnown RBP18.69■□□□□ 0.58
ATP1A1-207ENST00000479960 RIMBP3Q9UFD9 1639 aa18.69■□□□□ 0.58
ATP1A1-207ENST00000479960 KDM5BQ9UGL1 1544 aa18.68■□□□□ 0.58
ATP1A1-207ENST00000479960 ADCY10Q96PN6 1610 aa18.67■□□□□ 0.58
ATP1A1-207ENST00000479960 PHLDB1Q86UU1 1377 aa18.66■□□□□ 0.58
ATP1A1-207ENST00000479960 KIF14Q15058 1648 aa18.65■□□□□ 0.58
ATP1A1-207ENST00000479960 CCNB3Q8WWL7 1395 aa18.65■□□□□ 0.58
ATP1A1-207ENST00000479960 RRBP1Q9P2E9 1410 aaKnown RBP18.65■□□□□ 0.58
ATP1A1-207ENST00000479960 CYB5RLQ6IPT4 315 aa18.64■□□□□ 0.57
ATP1A1-207ENST00000479960 FAM50AQ14320 339 aaKnown RBP18.63■□□□□ 0.57
ATP1A1-207ENST00000479960 MYOM3Q5VTT5 1437 aa18.63■□□□□ 0.57
ATP1A1-207ENST00000479960 KCNH8Q96L42 1107 aa18.6■□□□□ 0.57
ATP1A1-207ENST00000479960 ITSN2Q9NZM3 1697 aa18.6■□□□□ 0.57
ATP1A1-207ENST00000479960 FGD6Q6ZV73 1430 aa18.59■□□□□ 0.57
ATP1A1-207ENST00000479960 MIA2Q96PC5 1412 aa18.57■□□□□ 0.56
ATP1A1-207ENST00000479960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.56
ATP1A1-207ENST00000479960 CFDP1Q9UEE9 299 aaPredicted RBP18.55■□□□□ 0.56
ATP1A1-207ENST00000479960 PTPN23Q9H3S7 1636 aa18.55■□□□□ 0.56
ATP1A1-207ENST00000479960 ITGAEP38570 1179 aa18.54■□□□□ 0.56
ATP1A1-207ENST00000479960 WDR7Q9Y4E6 1490 aa18.53■□□□□ 0.56
ATP1A1-207ENST00000479960 ASXL2Q76L83 1435 aa18.52■□□□□ 0.56
ATP1A1-207ENST00000479960 GPATCH8Q9UKJ3 1502 aaKnown RBP18.5■□□□□ 0.55
ATP1A1-207ENST00000479960 CDC42BPAQ5VT25 1732 aa18.5■□□□□ 0.55
ATP1A1-207ENST00000479960 ZNF777Q9ULD5 760 aaPredicted RBP18.5■□□□□ 0.55
ATP1A1-207ENST00000479960 ABCC10Q5T3U5 1492 aa18.5■□□□□ 0.55
ATP1A1-207ENST00000479960 MYO5CQ9NQX4 1742 aa18.49■□□□□ 0.55
ATP1A1-207ENST00000479960 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.48■□□□□ 0.55
ATP1A1-207ENST00000479960 TCOF1Q13428 1488 aaKnown RBP18.47■□□□□ 0.55
ATP1A1-207ENST00000479960 PREX2Q70Z35 1606 aa18.45■□□□□ 0.54
ATP1A1-207ENST00000479960 TTC37Q6PGP7 1564 aa18.44■□□□□ 0.54
ATP1A1-207ENST00000479960 ARHGAP5Q13017 1502 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms