RNA–Protein interactions for RNA: ENST00000479815.5

HMGN2-208, Transcript of high mobility group nucleosomal binding domain 2, human

TSL 5

Gene HMGN2, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN2-208	ENST00000479815	GAPVD1	Q14C86	1478 aa		14.29	□□□□□ -0.12
HMGN2-208	ENST00000479815	KIF21B	O75037	1637 aa		14.29	□□□□□ -0.12
HMGN2-208	ENST00000479815	SLC4A2	P04920	1241 aa		14.28	□□□□□ -0.12
HMGN2-208	ENST00000479815	IGF1R	P08069	1367 aa		14.28	□□□□□ -0.12
HMGN2-208	ENST00000479815	PRX	Q9BXM0	1461 aa		14.28	□□□□□ -0.12
HMGN2-208	ENST00000479815	TDRD9	Q8NDG6	1382 aa	Known RBP	14.26	□□□□□ -0.13
HMGN2-208	ENST00000479815	ZNF608	Q9ULD9	1512 aa	Predicted RBP	14.25	□□□□□ -0.13
HMGN2-208	ENST00000479815	EIF4G3	O43432	1585 aa	Known RBP	14.25	□□□□□ -0.13
HMGN2-208	ENST00000479815	CUL7	Q14999	1698 aa		14.24	□□□□□ -0.13
HMGN2-208	ENST00000479815	GRIN2B	Q13224	1484 aa		14.24	□□□□□ -0.13
HMGN2-208	ENST00000479815	FAM9A	Q8IZU1	332 aa	Predicted RBP	14.23	□□□□□ -0.13
HMGN2-208	ENST00000479815	DNAJC5	Q9H3Z4	198 aa		14.22	□□□□□ -0.13
HMGN2-208	ENST00000479815	AQR	O60306	1485 aa	Known RBP eCLIP	14.22	□□□□□ -0.13	9e-13	■■■■□ 25.4
HMGN2-208	ENST00000479815	PBRM1	Q86U86	1689 aa		14.22	□□□□□ -0.13
HMGN2-208	ENST00000479815	GOLGA3	Q08378	1498 aa		14.21	□□□□□ -0.13
HMGN2-208	ENST00000479815	CARMIL1	Q5VZK9	1371 aa		14.19	□□□□□ -0.14
HMGN2-208	ENST00000479815	ADAMTS12	P58397	1594 aa		14.18	□□□□□ -0.14
HMGN2-208	ENST00000479815	MAGI1	Q96QZ7	1491 aa	Predicted RBP	14.18	□□□□□ -0.14
HMGN2-208	ENST00000479815	RAPGEF2	Q9Y4G8	1499 aa		14.18	□□□□□ -0.14
HMGN2-208	ENST00000479815	FHAD1	B1AJZ9	1412 aa		14.16	□□□□□ -0.14
HMGN2-208	ENST00000479815	TNIK	Q9UKE5	1360 aa		14.13	□□□□□ -0.15
HMGN2-208	ENST00000479815	SNAPC4	Q5SXM2	1469 aa		14.12	□□□□□ -0.15
HMGN2-208	ENST00000479815	LOC105371045	A0A1W2PR82	267 aa		14.1	□□□□□ -0.15
HMGN2-208	ENST00000479815	SYNJ2	O15056	1496 aa		14.09	□□□□□ -0.15
HMGN2-208	ENST00000479815	TRH	P20396	242 aa	Predicted RBP	14.08	□□□□□ -0.16
HMGN2-208	ENST00000479815	GRIN2A	Q12879	1464 aa		14.06	□□□□□ -0.16
HMGN2-208	ENST00000479815	ABCB7	O75027	752 aa		14.02	□□□□□ -0.17
HMGN2-208	ENST00000479815	NUP160	Q12769	1436 aa		14.01	□□□□□ -0.17
HMGN2-208	ENST00000479815	APLP2	Q06481	763 aa		14.01	□□□□□ -0.17
HMGN2-208	ENST00000479815	CEP162	Q5TB80	1403 aa		14	□□□□□ -0.17
HMGN2-208	ENST00000479815	UBTF	P17480	764 aa	Known RBP	14	□□□□□ -0.17
HMGN2-208	ENST00000479815	ZNF219	Q9P2Y4	722 aa	Predicted RBP	14	□□□□□ -0.17
HMGN2-208	ENST00000479815	CTTNBP2	Q8WZ74	1663 aa		14	□□□□□ -0.17
HMGN2-208	ENST00000479815	POTEH	Q6S545	545 aa		13.98	□□□□□ -0.17
HMGN2-208	ENST00000479815	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.97	□□□□□ -0.17
HMGN2-208	ENST00000479815	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.97	□□□□□ -0.17
HMGN2-208	ENST00000479815	KIAA0586	Q9BVV6	1533 aa		13.96	□□□□□ -0.17
HMGN2-208	ENST00000479815	CEP170	Q5SW79	1584 aa		13.96	□□□□□ -0.18
HMGN2-208	ENST00000479815	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.95	□□□□□ -0.18
HMGN2-208	ENST00000479815	CHD1	O14646	1710 aa		13.95	□□□□□ -0.18
HMGN2-208	ENST00000479815	CLIP1	P30622	1438 aa		13.94	□□□□□ -0.18
HMGN2-208	ENST00000479815	IQGAP2	Q13576	1575 aa		13.94	□□□□□ -0.18
HMGN2-208	ENST00000479815	EHMT2	Q96KQ7	1210 aa		13.93	□□□□□ -0.18
HMGN2-208	ENST00000479815	EFCAB5	A4FU69	1503 aa		13.93	□□□□□ -0.18
HMGN2-208	ENST00000479815	UGGT2	Q9NYU1	1516 aa		13.92	□□□□□ -0.18
HMGN2-208	ENST00000479815	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.9	□□□□□ -0.18
HMGN2-208	ENST00000479815	SAMD9	Q5K651	1589 aa		13.9	□□□□□ -0.18
HMGN2-208	ENST00000479815	ARHGAP35	Q9NRY4	1499 aa		13.89	□□□□□ -0.19
HMGN2-208	ENST00000479815	CLASP1	Q7Z460	1538 aa		13.87	□□□□□ -0.19
HMGN2-208	ENST00000479815	ARAP1	Q96P48	1450 aa		13.87	□□□□□ -0.19
HMGN2-208	ENST00000479815	FBLN2	P98095	1184 aa		13.85	□□□□□ -0.19
HMGN2-208	ENST00000479815	SHROOM2	Q13796	1616 aa		13.85	□□□□□ -0.19
HMGN2-208	ENST00000479815	VPS8	Q8N3P4	1428 aa		13.82	□□□□□ -0.2
HMGN2-208	ENST00000479815	DISP1	Q96F81	1524 aa		13.82	□□□□□ -0.2
HMGN2-208	ENST00000479815	KIAA0556	O60303	1618 aa		13.81	□□□□□ -0.2
HMGN2-208	ENST00000479815	FHOD3	Q2V2M9	1422 aa		13.77	□□□□□ -0.21
HMGN2-208	ENST00000479815	JPH4	Q96JJ6	628 aa		13.77	□□□□□ -0.21
HMGN2-208	ENST00000479815	FMN1	Q68DA7	1419 aa		13.76	□□□□□ -0.21
HMGN2-208	ENST00000479815	CARMIL2	Q6F5E8	1435 aa		13.76	□□□□□ -0.21
HMGN2-208	ENST00000479815	MYCN	P04198	464 aa	Predicted RBP	13.74	□□□□□ -0.21
HMGN2-208	ENST00000479815	OSCAR	Q8IYS5	282 aa		13.73	□□□□□ -0.21
HMGN2-208	ENST00000479815	PRG4	Q92954	1404 aa	Predicted RBP	13.73	□□□□□ -0.21
HMGN2-208	ENST00000479815	FYCO1	Q9BQS8	1478 aa		13.72	□□□□□ -0.21
HMGN2-208	ENST00000479815	CASKIN1	Q8WXD9	1431 aa		13.72	□□□□□ -0.21
HMGN2-208	ENST00000479815	RANGAP1	P46060	587 aa	Predicted RBP	13.71	□□□□□ -0.21
HMGN2-208	ENST00000479815	MAP3K1	Q13233	1512 aa		13.69	□□□□□ -0.22
HMGN2-208	ENST00000479815	PCF11	O94913	1555 aa	Known RBP	13.69	□□□□□ -0.22
HMGN2-208	ENST00000479815	ERCC6L2	Q5T890	1561 aa		13.66	□□□□□ -0.22
HMGN2-208	ENST00000479815	P3H3	Q8IVL6	736 aa		13.65	□□□□□ -0.22
HMGN2-208	ENST00000479815	ABCA8	O94911	1581 aa		13.64	□□□□□ -0.23
HMGN2-208	ENST00000479815	POLA2	Q14181	598 aa		13.64	□□□□□ -0.23
HMGN2-208	ENST00000479815	HECW1	Q76N89	1606 aa		13.64	□□□□□ -0.23
HMGN2-208	ENST00000479815	PTPRG	P23470	1445 aa		13.63	□□□□□ -0.23
HMGN2-208	ENST00000479815	CFAP43	Q8NDM7	1665 aa		13.63	□□□□□ -0.23
HMGN2-208	ENST00000479815	RAPGEF6	Q8TEU7	1601 aa		13.62	□□□□□ -0.23
HMGN2-208	ENST00000479815	CCDC18	Q5T9S5	1454 aa		13.61	□□□□□ -0.23
HMGN2-208	ENST00000479815	TIAM1	Q13009	1591 aa		13.61	□□□□□ -0.23
HMGN2-208	ENST00000479815	NUP153	P49790	1475 aa	Known RBP	13.61	□□□□□ -0.23
HMGN2-208	ENST00000479815	RBM42	Q9BTD8	480 aa	Known RBP	13.6	□□□□□ -0.23
HMGN2-208	ENST00000479815	UHRF1BP1L	A0JNW5	1464 aa		13.59	□□□□□ -0.23
HMGN2-208	ENST00000479815	PLB1	Q6P1J6	1458 aa		13.59	□□□□□ -0.23
HMGN2-208	ENST00000479815	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.58	□□□□□ -0.24
HMGN2-208	ENST00000479815	EPRS	P07814	1512 aa	Known RBP	13.58	□□□□□ -0.24
HMGN2-208	ENST00000479815	UACA	Q9BZF9	1416 aa		13.57	□□□□□ -0.24
HMGN2-208	ENST00000479815	LRRIQ1	Q96JM4	1722 aa		13.57	□□□□□ -0.24
HMGN2-208	ENST00000479815	ARHGEF11	O15085	1522 aa		13.57	□□□□□ -0.24
HMGN2-208	ENST00000479815	ABCC2	Q92887	1545 aa		13.57	□□□□□ -0.24
HMGN2-208	ENST00000479815	LRRC9	Q6ZRR7	1453 aa		13.54	□□□□□ -0.24
HMGN2-208	ENST00000479815	CDK13	Q14004	1512 aa	Known RBP	13.51	□□□□□ -0.25
HMGN2-208	ENST00000479815	EHBP1L1	Q8N3D4	1523 aa		13.51	□□□□□ -0.25
HMGN2-208	ENST00000479815	FOXD4L1	Q9NU39	408 aa		13.51	□□□□□ -0.25
HMGN2-208	ENST00000479815	KDM5B	Q9UGL1	1544 aa		13.5	□□□□□ -0.25
HMGN2-208	ENST00000479815	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.5	□□□□□ -0.25
HMGN2-208	ENST00000479815	RIMBP3C	A6NJZ7	1639 aa		13.5	□□□□□ -0.25
HMGN2-208	ENST00000479815	RIMBP3B	A6NNM3	1639 aa		13.5	□□□□□ -0.25
HMGN2-208	ENST00000479815	RIMBP3	Q9UFD9	1639 aa		13.5	□□□□□ -0.25
HMGN2-208	ENST00000479815	ATP10B	O94823	1461 aa		13.49	□□□□□ -0.25
HMGN2-208	ENST00000479815	ADCY10	Q96PN6	1610 aa		13.49	□□□□□ -0.25
HMGN2-208	ENST00000479815	MAGI3	Q5TCQ9	1506 aa		13.49	□□□□□ -0.25
HMGN2-208	ENST00000479815	KANK4	Q5T7N3	995 aa	Predicted RBP	13.48	□□□□□ -0.25

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