RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 CARMIL1Q5VZK9 1371 aa25.81■■□□□ 1.72
PRKN-207ENST00000479615 KIAA0586Q9BVV6 1533 aa25.79■■□□□ 1.72
PRKN-207ENST00000479615 ERCC6L2Q5T890 1561 aa25.79■■□□□ 1.72
PRKN-207ENST00000479615 RUSC2Q8N2Y8 1516 aa25.76■■□□□ 1.71
PRKN-207ENST00000479615 NPM1P06748 294 aaKnown RBP eCLIP25.6■■□□□ 1.69
PRKN-207ENST00000479615 RAPGEF2Q9Y4G8 1499 aa25.6■■□□□ 1.69
PRKN-207ENST00000479615 CARMIL2Q6F5E8 1435 aa25.57■■□□□ 1.68
PRKN-207ENST00000479615 IQGAP2Q13576 1575 aa25.51■■□□□ 1.67
PRKN-207ENST00000479615 PTPRGP23470 1445 aa25.5■■□□□ 1.67
PRKN-207ENST00000479615 TNIKQ9UKE5 1360 aa25.49■■□□□ 1.67
PRKN-207ENST00000479615 MAPKBP1O60336 1514 aa25.41■■□□□ 1.66
PRKN-207ENST00000479615 UGGT2Q9NYU1 1516 aa25.39■■□□□ 1.66
PRKN-207ENST00000479615 ADCY10Q96PN6 1610 aa25.39■■□□□ 1.66
PRKN-207ENST00000479615 PRXQ9BXM0 1461 aa25.38■■□□□ 1.65
PRKN-207ENST00000479615 ABCC10Q5T3U5 1492 aa25.36■■□□□ 1.65
PRKN-207ENST00000479615 DISP1Q96F81 1524 aa25.36■■□□□ 1.65
PRKN-207ENST00000479615 FAM69CQ0P6D2 419 aa25.34■■□□□ 1.65
PRKN-207ENST00000479615 CSRNP3Q8WYN3 585 aa25.32■■□□□ 1.64
PRKN-207ENST00000479615 UHRF1BP1LA0JNW5 1464 aa25.32■■□□□ 1.64
PRKN-207ENST00000479615 TTBK1Q5TCY1 1321 aaPredicted RBP25.32■■□□□ 1.64
PRKN-207ENST00000479615 EEA1Q15075 1411 aa25.31■■□□□ 1.64
PRKN-207ENST00000479615 UACAQ9BZF9 1416 aa25.3■■□□□ 1.64
PRKN-207ENST00000479615 ABCC2Q92887 1545 aa25.3■■□□□ 1.64
PRKN-207ENST00000479615 GOLGA3Q08378 1498 aa25.29■■□□□ 1.64
PRKN-207ENST00000479615 FAM9AQ8IZU1 332 aaPredicted RBP25.25■■□□□ 1.63
PRKN-207ENST00000479615 KIF13AQ9H1H9 1805 aa25.25■■□□□ 1.63
PRKN-207ENST00000479615 KIAA0556O60303 1618 aa25.24■■□□□ 1.63
PRKN-207ENST00000479615 CTTNBP2Q8WZ74 1663 aa25.23■■□□□ 1.63
PRKN-207ENST00000479615 PLB1Q6P1J6 1458 aa25.22■■□□□ 1.63
PRKN-207ENST00000479615 DIP2BQ9P265 1576 aa25.22■■□□□ 1.63
PRKN-207ENST00000479615 KDM5BQ9UGL1 1544 aa25.17■■□□□ 1.62
PRKN-207ENST00000479615 ASXL2Q76L83 1435 aa25.16■■□□□ 1.62
PRKN-207ENST00000479615 GLI2P10070 1586 aa25.08■■□□□ 1.61
PRKN-207ENST00000479615 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
PRKN-207ENST00000479615 ABCA8O94911 1581 aa25.01■■□□□ 1.59
PRKN-207ENST00000479615 EPRSP07814 1512 aaKnown RBP25.01■■□□□ 1.59
PRKN-207ENST00000479615 ZCCHC11Q5TAX3 1644 aaKnown RBP25.01■■□□□ 1.59
PRKN-207ENST00000479615 WDR7Q9Y4E6 1490 aa24.98■■□□□ 1.59
PRKN-207ENST00000479615 AEBP2Q6ZN18 517 aaPredicted RBP24.96■■□□□ 1.59
PRKN-207ENST00000479615 P3H3Q8IVL6 736 aa24.96■■□□□ 1.59
PRKN-207ENST00000479615 KIF21BO75037 1637 aa24.94■■□□□ 1.58
PRKN-207ENST00000479615 SAMD9Q5K651 1589 aa24.94■■□□□ 1.58
PRKN-207ENST00000479615 KDM6BO15054 1643 aa24.94■■□□□ 1.58
PRKN-207ENST00000479615 TEX14Q8IWB6 1497 aa24.92■■□□□ 1.58
PRKN-207ENST00000479615 TSPOAP1O95153 1857 aa24.92■■□□□ 1.58
PRKN-207ENST00000479615 MAP3K4Q9Y6R4 1608 aa24.87■■□□□ 1.57
PRKN-207ENST00000479615 KCNH8Q96L42 1107 aa24.86■■□□□ 1.57
PRKN-207ENST00000479615 ATP10BO94823 1461 aa24.84■■□□□ 1.57
PRKN-207ENST00000479615 EFCAB5A4FU69 1503 aa24.83■■□□□ 1.57
PRKN-207ENST00000479615 UBTFP17480 764 aaKnown RBP24.83■■□□□ 1.57
PRKN-207ENST00000479615 RANGAP1P46060 587 aaPredicted RBP24.82■■□□□ 1.56
PRKN-207ENST00000479615 CD109Q6YHK3 1445 aa24.82■■□□□ 1.56
PRKN-207ENST00000479615 PPRC1Q5VV67 1664 aaKnown RBP24.81■■□□□ 1.56
PRKN-207ENST00000479615 MAGI3Q5TCQ9 1506 aa24.8■■□□□ 1.56
PRKN-207ENST00000479615 RAPGEF6Q8TEU7 1601 aa24.79■■□□□ 1.56
PRKN-207ENST00000479615 FHOD3Q2V2M9 1422 aa24.78■■□□□ 1.56
PRKN-207ENST00000479615 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.77■■□□□ 1.56
PRKN-207ENST00000479615 HNRNPUL2Q1KMD3 747 aaKnown RBP24.77■■□□□ 1.56
PRKN-207ENST00000479615 CFAP43Q8NDM7 1665 aa24.76■■□□□ 1.55
PRKN-207ENST00000479615 ARID3CA6NKF2 412 aa24.75■■□□□ 1.55
PRKN-207ENST00000479615 NUP153P49790 1475 aaKnown RBP24.71■■□□□ 1.55
PRKN-207ENST00000479615 PHLDB1Q86UU1 1377 aa24.71■■□□□ 1.55
PRKN-207ENST00000479615 PLEKHD1A6NEE1 506 aa24.71■■□□□ 1.55
PRKN-207ENST00000479615 COL17A1Q9UMD9 1497 aaPredicted RBP24.7■■□□□ 1.55
PRKN-207ENST00000479615 FMN1Q68DA7 1419 aa24.67■■□□□ 1.54
PRKN-207ENST00000479615 EHMT2Q96KQ7 1210 aa24.64■■□□□ 1.54
PRKN-207ENST00000479615 ABCA9Q8IUA7 1624 aa24.63■■□□□ 1.53
PRKN-207ENST00000479615 ARAP3Q8WWN8 1544 aa24.6■■□□□ 1.53
PRKN-207ENST00000479615 KDM4FA0A1W2PPD8 638 aa24.59■■□□□ 1.53
PRKN-207ENST00000479615 ARHGAP35Q9NRY4 1499 aa24.58■■□□□ 1.53
PRKN-207ENST00000479615 CDK11AQ9UQ88 783 aaPredicted RBP24.57■■□□□ 1.52
PRKN-207ENST00000479615 NEO1Q92859 1461 aa24.57■■□□□ 1.52
PRKN-207ENST00000479615 ATP1B4Q9UN42 357 aaPredicted RBP24.51■■□□□ 1.51
PRKN-207ENST00000479615 HECW1Q76N89 1606 aa24.49■■□□□ 1.51
PRKN-207ENST00000479615 CDK13Q14004 1512 aaKnown RBP24.45■■□□□ 1.5
PRKN-207ENST00000479615 ADGRL1O94910 1474 aa24.45■■□□□ 1.5
PRKN-207ENST00000479615 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.43■■□□□ 1.5
PRKN-207ENST00000479615 RAPGEF3O95398 923 aa24.41■■□□□ 1.5
PRKN-207ENST00000479615 FANCAO15360 1455 aa24.4■■□□□ 1.5
PRKN-207ENST00000479615 AKNAQ7Z591 1439 aa24.4■■□□□ 1.5
PRKN-207ENST00000479615 CFAP74Q9C0B2 1584 aa24.39■■□□□ 1.5
PRKN-207ENST00000479615 PLCH2O75038 1416 aa24.37■■□□□ 1.49
PRKN-207ENST00000479615 CLIP1P30622 1438 aa24.37■■□□□ 1.49
PRKN-207ENST00000479615 CASKIN1Q8WXD9 1431 aa24.37■■□□□ 1.49
PRKN-207ENST00000479615 DENND4BO75064 1496 aaPredicted RBP24.37■■□□□ 1.49
PRKN-207ENST00000479615 TROQ12816 1431 aaPredicted RBP24.35■■□□□ 1.49
PRKN-207ENST00000479615 CCDC18Q5T9S5 1454 aa24.34■■□□□ 1.49
PRKN-207ENST00000479615 EFCAB2Q5VUJ9 269 aa24.34■■□□□ 1.49
PRKN-207ENST00000479615 TTC37Q6PGP7 1564 aa24.33■■□□□ 1.48
PRKN-207ENST00000479615 FYCO1Q9BQS8 1478 aa24.28■■□□□ 1.48
PRKN-207ENST00000479615 KIF14Q15058 1648 aa24.28■■□□□ 1.48
PRKN-207ENST00000479615 MAGI2Q86UL8 1455 aa24.26■■□□□ 1.47
PRKN-207ENST00000479615 FRMPD1Q5SYB0 1578 aa24.25■■□□□ 1.47
PRKN-207ENST00000479615 SCAPERQ9BY12 1400 aa24.25■■□□□ 1.47
PRKN-207ENST00000479615 PCF11O94913 1555 aaKnown RBP24.23■■□□□ 1.47
PRKN-207ENST00000479615 ARID4BQ4LE39 1312 aaPredicted RBP24.21■■□□□ 1.47
PRKN-207ENST00000479615 RICTORQ6R327 1708 aa24.21■■□□□ 1.47
PRKN-207ENST00000479615 ZMYM4Q5VZL5 1548 aa24.2■■□□□ 1.47
PRKN-207ENST00000479615 MYO5CQ9NQX4 1742 aa24.2■■□□□ 1.46
PRKN-207ENST00000479615 POGZQ7Z3K3 1410 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms